Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq444 511 6e-140 seq10427 376 3e-99 seq32303 266 4e-66 seq31551 221 1e-52 seq31730 159 4e-34 seq31523 147 3e-30 seq34854 138 1e-27 seq85 132 6e-26 seq111 125 8e-24 seq328 120 4e-22 seq77 118 1e-21 seq231 116 4e-21 seq203 107 2e-18 seq80 107 2e-18 seq134 93.3 5e-14 >seq444 Length=4271 Score = 511 bits (566), Expect = 6e-140 Identities = 715/1000 (72%), Gaps = 2/1000 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| |||| ||| | ||| | |||| |||| ||||| ||||| | Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | ||||||||||| || ||| Sbjct 1054 ATGATCCCTACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCCT 995 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACAA 171998 || || ||||| || || || | ||||| ||| | || ||| ||||| || || ||||| Sbjct 994 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACAA 936 Query 171999 CATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTAT 172058 || || || ||||| || |||| | || || || || | || || ||||| || Sbjct 935 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAAT 876 Query 172059 CTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAAT 172118 ||||||||| ||| |||| ||||||||| | ||||| || ||||||||| | | | | Sbjct 875 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGT 816 Query 172119 CTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAG 172178 | ||||| | | ||| | | || ||||| | |||||||||| | | | Sbjct 815 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 756 Query 172179 ATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGC 172238 | |||||| | || ||||| ||| ||||||||||| ||||| |||| || ||| Sbjct 755 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 696 Query 172239 TGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 172298 ||| ||| | | |||||| | |||||||| || |||||||||||||| ||||| || Sbjct 695 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 636 Query 172299 CTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCC 172358 ||| ||||| |||||||||||| | || ||||| || ||||| |||||||| ||||| || Sbjct 635 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 576 Query 172359 TTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGG 172418 || |||||| ||| ||||| || | || || || || | || || ||||| || Sbjct 575 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 516 Query 172419 TTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGG 172478 ||| || || || ||| | | ||||| || || || ||| ||||| || | || Sbjct 515 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 456 Query 172479 ATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGG 172538 |||| ||||| |||||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct 455 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 396 Query 172539 TCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 172598 || | || ||||| |||||| ||||||||| || | | | || |||||| |||| Sbjct 395 CCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 336 Query 172599 AGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 172658 | || || || ||| || | ||||| || || | ||||| |||| ||||| ||||| Sbjct 335 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 276 Query 172659 CCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTAC 172718 ||| || |||||||| |||||||||||||| || ||| | | || || || ||| Sbjct 275 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 216 Query 172719 ATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGC 172778 |||| ||| || ||||| | || ||||| ||||||||||||||||||||| | ||||| Sbjct 215 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 156 Query 172779 ACACAACTTCCCATTAGACCTTGCTTCTGCAGAGTCTTCA 172818 ||||||||||| ||||||| ||| ||| ||| || || Sbjct 155 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 116 >seq10427 Length=4047 Score = 376 bits (416), Expect = 3e-99 Identities = 704/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || || ||||| || | || ||||||||| Sbjct 776 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 835 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || ||||||||| ||| || ||||| Sbjct 836 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 895 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| || |||||| Sbjct 896 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 955 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | |||| || ||||| Sbjct 956 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 1015 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || ||||||| ||| | || || |||||| ||||| Sbjct 1016 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 1075 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || | || || | || | | | |||||||| ||| | ||||| ||||| | || || Sbjct 1076 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 1135 Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370 ||| | ||||||| || ||| |||||||||||| | || || || || | Sbjct 1136 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 1195 Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430 |||| |||| || |||||||| || |||||||||| || ||| || ||| Sbjct 1196 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 1255 Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490 || || || || ||||| | ||| | || | ||||| || || || |||||||| Sbjct 1256 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 1315 Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550 |||||||| |||||||| || || || |||| || | || | ||||| || |||||| Sbjct 1316 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 1375 Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610 ||||| || || | || || || | ||||| || ||| ||| Sbjct 1376 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT------ 1417 Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670 | | || ||| | || ||| | || || || | |||||||||||| ||| | Sbjct 1418 ---GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 1474 Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730 || || ||| | || |||||||| || ||||| | || ||||| || ||| | | ||| Sbjct 1475 ACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 1534 Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790 || ||| | ||||| || ||||| || | ||| | |||| | | || | || Sbjct 1535 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 1594 Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850 ||| | || | ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 1595 GGTTTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 1654 Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910 |||||||| || ||||||||||| ||||| ||||| ||| | || |||||||| | || Sbjct 1655 GATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 1714 Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970 |||||| | || |||||| || ||||| ||| | |||| || || || || ||||| Sbjct 1715 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 1774 Query 173971 AGAGGTAACGCACTTTAA 173988 | || ||||| |||||| Sbjct 1775 CGTGGAAACGCTCTTTAA 1792 >seq32303 Length=834 Score = 266 bits (294), Expect = 4e-66 Identities = 438/632 (69%), Gaps = 0/632 (0%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||||| |||||||| || | || ||||| ||| Sbjct 736 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 677 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | | | |||||||||||| ||| || ||||| Sbjct 676 CTATTGCTCTTTCCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTT 617 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | |||||| ||||| ||| Sbjct 616 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAACTTCTTA 557 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | |||| || ||||| Sbjct 556 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 497 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || ||||||| ||| | || || || |||| ||||| Sbjct 496 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGTG 437 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || | || || | || ||||| |||||||||||| | ||||| ||||| | || || Sbjct 436 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 377 Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370 ||| | ||||||| || ||| ||||||| |||| | || || || || | Sbjct 376 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTT 317 Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430 | || | || || |||||||| ||| |||||||||| || ||| || ||| Sbjct 316 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 257 Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490 || ||||| || ||||| | ||| | || | ||||| || || || |||||||| Sbjct 256 GTAGCAGCTATATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 197 Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550 |||||||| |||||||| ||||| || || | || | || | ||||| || |||||| Sbjct 196 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTCAT 137 Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGA 173582 ||||| || || | || || || | |||||| Sbjct 136 GGTGCTACCGTAGAAAATACTTTATTTGAAGA 105 >seq31551 Length=1713 Score = 221 bits (244), Expect = 1e-52 Identities = 307/427 (72%), Gaps = 6/427 (1%) Strand=Plus/Minus Query 172387 TTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGA 172446 || || || ||| ||||| || ||||| ||||| || || || ||| | | ||||| Sbjct 1149 TTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGG 1090 Query 172447 GAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACA 172506 || || || ||| ||||| || || |||| ||||| |||||||||||||| Sbjct 1089 GAAACCACAGAAAATGAATCTGCTAATGTAGGTTACAGATTCGGTCAAGAAGAAGAAACT 1030 Query 172507 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 172566 || || || ||||| || || ||||| ||||| || | |||||||| |||||| | || Sbjct 1029 TATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTGTC 970 Query 172567 AACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTA 172626 ||||| || | | || ||||||||||| | || ||||| ||| || | ||||| Sbjct 969 AACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTC 910 Query 172627 ACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATC- 172685 || || | ||||| | || ||||| || || | ||||||||||| ||||||||||| Sbjct 909 ACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAATTTCAACCAATCT 850 Query 172686 --AGTTG-TAG--ATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGA 172740 ||||| ||| | | || ||| | | || ||| |||| ||| | ||||| | Sbjct 849 GTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGATCTCATTAACCGT 790 Query 172741 GCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTT 172800 || ||||| ||||||||||||||||||||| | ||||| || |||||||| ||||||| Sbjct 789 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCCCTAGACCTA 730 Query 172801 GCTTCTG 172807 ||| ||| Sbjct 729 GCTGCTG 723 >seq31730 Length=297 Score = 159 bits (176), Expect = 4e-34 Identities = 207/286 (72%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 172160 AGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCAC 172219 |||||||||| | | | | |||||| | || ||||| ||| ||||||||||| | Sbjct 11 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 70 Query 172220 CTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTG 172279 |||| |||| || |||||| ||| | | || ||| | ||||| || || |||| Sbjct 71 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTG 130 Query 172280 ATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGC 172339 |||||||||| ||||| || || ||||| |||||||| ||| | || ||||| || |||| Sbjct 131 ATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 190 Query 172340 ATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTT 172399 | ||||| || ||||| || || |||||| ||| ||||| || | || || || || Sbjct 191 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 250 Query 172400 TATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAG 172445 ||||| || ||||| ||||| || || || ||| | | ||||| Sbjct 251 TATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 296 >seq31523 Length=225 Score = 147 bits (162), Expect = 3e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536 || |||| ||||| ||||| |||||||| || || || ||||| || || ||||| ||| Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84 Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTA 172596 || || | |||||||| |||||| ||||||||| || | | | |||||||||||| Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144 Query 172597 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTC 172656 || | || ||||| ||| || | ||||| || || | |||||| | || ||||| ||| Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTC 204 Query 172657 AACCTTAACGGTTTCAACTTC 172677 ||||| || |||||||| ||| Sbjct 205 AACCTAAATGGTTTCAATTTC 225 >seq34854 Length=328 Score = 138 bits (152), Expect = 1e-27 Identities = 205/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| || | ||| | |||| |||| ||||| ||||| | Sbjct 32 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 91 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || |||| |||||||| || ||| Sbjct 92 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCT 151 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | ||||| ||| | || ||| | | ||||| ||||| Sbjct 152 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 211 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || ||||| ||||| || |||| | || || |||||| | || || ||||| || Sbjct 212 ATTATCTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATA 271 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAG 172110 |||||||| ||| | || ||||||||||| ||||| || ||||||||| || Sbjct 272 TGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAG 322 >seq85 Length=5226098 Score = 132 bits (146), Expect = 6e-26 Identities = 132/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 172636 GGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGAT 172695 |||||| | || ||||| |||||||| || |||||||| ||||||||||| || || ||| Sbjct 1123353 GGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGAT 1123294 Query 172696 GCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATG 172755 | | ||| | || |||||||| ||| || |||| | || ||||| |||||| Sbjct 1123293 AGTCAAGGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATG 1123234 Query 172756 GAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCT 172806 ||||||||||||||| | ||||| || |||||||| ||||||| ||| || Sbjct 1123233 GAAGTTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGCTACT 1123183 >seq111 Length=3019079 Score = 125 bits (138), Expect = 8e-24 Identities = 197/282 (70%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 173707 GCATTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATG 173766 || ||||| || ||| | | ||||| ||| | ||||| || ||||| || | ||| | Sbjct 6797 GCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTA 6738 Query 173767 TGGACATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTA 173826 |||| | | || | || ||||| || || ||||| | || || ||||| || Sbjct 6737 TGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTT 6678 Query 173827 TCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATA 173886 || || ||||| | ||||| |||||||| || || || ||||||||||| || ||||| Sbjct 6677 TCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATT 6618 Query 173887 CTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTC 173946 || | || |||||||| | || |||||| | || |||||| || ||||| ||| | Sbjct 6617 CTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTT 6558 Query 173947 GTATTTCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 173988 |||| || || || || |||| | || ||| | |||||| Sbjct 6557 ATATTCCCTGAGGAGGTTCTACCCCGTGGAAACCCTCTTTAA 6516 >seq328 Length=921196 Score = 120 bits (132), Expect = 4e-22 Identities = 183/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 173683 TTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTCATG 173742 || ||||| || || ||||| | || ||||| || ||| | | ||||| ||| | ||| Sbjct 671657 TTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 671598 Query 173743 TTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCACTT 173802 || || ||||| || | ||| | |||| | | || | || ||||| || || Sbjct 671597 TTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTG 671538 Query 173803 AACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTC 173862 ||||| | || || ||||| || || || ||||| | ||||| |||||||| || || Sbjct 671537 AACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTT 671478 Query 173863 GAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTCATCT 173922 || ||||||||||| || ||||| || | || ||||||| | || |||||| | || Sbjct 671477 GAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGCTTGGATGGCGGCT 671418 Query 173923 GTAGATCAACCACATGAGAAC 173943 |||||| || ||||| ||| Sbjct 671417 CAAGATCAGCCTCATGAAAAC 671397 >seq77 Length=8408033 Score = 118 bits (130), Expect = 1e-21 Identities = 248/370 (67%), Gaps = 0/370 (0%) Strand=Plus/Plus Query 171925 TTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTC 171984 ||||| || || ||||| | ||||| || || || | |||| || | | ||| | Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754 Query 171985 TTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTC 172044 | ||||| ||||| || ||||| ||||| || ||||| | || || |||||| | Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTG 2698814 Query 172045 CACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCT 172104 || | ||||| || | ||||||| || | || ||||||||||| ||||| || |||||| Sbjct 2698815 CATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCT 2698874 Query 172105 TATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGG 172164 ||| || | | | | |||||| | | ||| | | |||||||| | ||||| Sbjct 2698875 TATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 2698934 Query 172165 GAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTA 172224 ||||| | | |||||||| | | ||||| ||| ||||||||||| ||||| Sbjct 2698935 GAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 2698994 Query 172225 TCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGT 172284 || || || ||| ||| | | || ||| | ||||| || | |||| || Sbjct 2698995 GCAATTGCTATTATTGTTTTCTTGATCTACCCAATTGGTCACATAAGTTTTTATGATTGT 2699054 Query 172285 ATGCCACTAG 172294 ||||| |||| Sbjct 2699055 ATGCCTCTAG 2699064 >seq231 Length=1485859 Score = 116 bits (128), Expect = 4e-21 Identities = 208/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 173650 GAAGAAACTTATAGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCA 173709 |||||||| ||| ||| | || || || | || ||||| || || ||||| | || Sbjct 476701 GAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 476642 Query 173710 TTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGG 173769 ||||| || ||| | | ||||| || | ||||| || ||||| || | ||| | ||| Sbjct 476641 TTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACCGGTTTATGG 476582 Query 173770 ACATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCT 173829 | | | || | || ||||| || | ||||| | || || |||| || | Sbjct 476581 ATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAACTTCGTTTGC 476522 Query 173830 CAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTT 173889 || ||||| | |||||||||||||| || || || |||||||||| || ||||| || Sbjct 476521 CAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAAAATATTCTC 476462 Query 173890 CTTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTA 173949 | || ||| |||| | || | |||| | || ||||||||| ||||| ||| | || Sbjct 476461 TTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAAAACCTTATA 476402 Query 173950 TTTC 173953 |||| Sbjct 476401 TTTC 476398 >seq203 Length=8626763 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 172181 TAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTG 172240 |||||||| | || ||||| ||| ||||||||||| || || || | || ||||| Sbjct 3756484 TAGGTATGCGCCCTTGGATTGTTGTTGCATATTCAGCTCCGGTTGCAACTGCTACTGCTG 3756425 Query 172241 TGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCT 172300 | ||| | | || ||| | ||||| || ||| | ||||| |||||| ||||| || | Sbjct 3756424 TTTTCTTGATCTACCCAATTGGTCAAGGAAGATTTTATGATGATATGCCTCTAGGAATTT 3756365 Query 172301 CAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTT 172360 | || | ||||| || ||| | || |||||||| ||||| ||||| || ||| |||| | Sbjct 3756364 CCAGTGCTTTCAATTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGTATCCAT 3756305 Query 172361 TCCA 172364 | || Sbjct 3756304 TGCA 3756301 >seq80 Length=1461076 Score = 107 bits (118), Expect = 2e-18 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| || ||||| || ||||| ||| | || ||||||||||||||||| ||||||||||| Sbjct 1153212 TGGAGCTGATGTTTGCCATCTCAACCTCCACAAGACATTCTGTATTCCTCATGGAGGTGG 1153153 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTT 159801 |||||||| | || |||||||||||| ||||| || |||||||| Sbjct 1153152 TGGTCCTGGGATGGGCCCTATTGGTGTAAAGAAACACCTGGCACCATTT 1153104 >seq134 Length=15115857 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 171920 TTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTT 171979 |||| ||||||| || ||||| || ||||| || || ||| | | || || | || | Sbjct 3765944 TTGCCTTCATTGTTGCTCCTCCAGTTGATATTGATGGTATCTGTAAGCCTATTTCTGGAT 3765885 Query 171980 CTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAG 172039 || | | ||||||||||| || || | || || || |||| | | | | |||| Sbjct 3765884 CTCTACTTTATGGTAACAATATTATTTATGATGGCATTATTCCTACTCCTACAACTATAG 3765825 Query 172040 GTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTG 172099 || | || || ||| | || |||||||||||| | || ||||||||||| ||||| | Sbjct 3765824 GTTTGCATTTTTACTCAATATGGGAAGCAGCATCTGTTGATGAATGGTTATACAACGACA 3765765 Query 172100 GTCCTTATCAG 172110 |||||||| || Sbjct 3765764 GTCCTTATGAG 3765754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587783813119360