Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq444 511 6e-140
seq10427 376 3e-99
seq32303 266 4e-66
seq31551 221 1e-52
seq31730 159 4e-34
seq31523 147 3e-30
seq34854 138 1e-27
seq85 132 6e-26
seq111 125 8e-24
seq328 120 4e-22
seq77 118 1e-21
seq231 116 4e-21
seq203 107 2e-18
seq80 107 2e-18
seq134 93.3 5e-14
>seq444
Length=4271
Score = 511 bits (566), Expect = 6e-140
Identities = 715/1000 (72%), Gaps = 2/1000 (0%)
Strand=Plus/Minus
Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879
||||| | ||| |||| ||| | ||| | |||| |||| ||||| ||||| |
Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055
Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939
|||||||| || | || ||| | | || || | ||||||||||| || |||
Sbjct 1054 ATGATCCCTACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCCT 995
Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACAA 171998
|| || ||||| || || || | ||||| ||| | || ||| ||||| || || |||||
Sbjct 994 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACAA 936
Query 171999 CATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTAT 172058
|| || || ||||| || |||| | || || || || | || || ||||| ||
Sbjct 935 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAAT 876
Query 172059 CTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAAT 172118
||||||||| ||| |||| ||||||||| | ||||| || ||||||||| | | | |
Sbjct 875 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGT 816
Query 172119 CTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAG 172178
| ||||| | | ||| | | || ||||| | |||||||||| | | |
Sbjct 815 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 756
Query 172179 ATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGC 172238
| |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||
Sbjct 755 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 696
Query 172239 TGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 172298
||| ||| | | |||||| | |||||||| || |||||||||||||| ||||| ||
Sbjct 695 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 636
Query 172299 CTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCC 172358
||| ||||| |||||||||||| | || ||||| || ||||| |||||||| ||||| ||
Sbjct 635 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 576
Query 172359 TTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGG 172418
|| |||||| ||| ||||| || | || || || || | || || ||||| ||
Sbjct 575 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 516
Query 172419 TTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGG 172478
||| || || || ||| | | ||||| || || || ||| ||||| || | ||
Sbjct 515 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 456
Query 172479 ATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGG 172538
|||| ||||| |||||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct 455 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 396
Query 172539 TCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 172598
|| | || ||||| |||||| ||||||||| || | | | || |||||| ||||
Sbjct 395 CCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 336
Query 172599 AGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 172658
| || || || ||| || | ||||| || || | ||||| |||| ||||| |||||
Sbjct 335 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 276
Query 172659 CCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTAC 172718
||| || |||||||| |||||||||||||| || ||| | | || || || |||
Sbjct 275 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 216
Query 172719 ATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGC 172778
|||| ||| || ||||| | || ||||| ||||||||||||||||||||| | |||||
Sbjct 215 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 156
Query 172779 ACACAACTTCCCATTAGACCTTGCTTCTGCAGAGTCTTCA 172818
||||||||||| ||||||| ||| ||| ||| || ||
Sbjct 155 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 116
>seq10427
Length=4047
Score = 376 bits (416), Expect = 3e-99
Identities = 704/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Plus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||| || || ||||| || | || |||||||||
Sbjct 776 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 835
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | || | || ||||||||| ||| || |||||
Sbjct 836 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 895
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | || ||| ||| | ||||| || ||||||
Sbjct 896 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 955
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190
|| || ||||| || || |||| | | | ||| | | |||| || |||||
Sbjct 956 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 1015
Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250
|||||||||||||| || ||||||| ||| | || || |||||| |||||
Sbjct 1016 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 1075
Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310
|| | || || | || | | | |||||||| ||| | ||||| ||||| | || ||
Sbjct 1076 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 1135
Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370
||| | ||||||| || ||| |||||||||||| | || || || || |
Sbjct 1136 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 1195
Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430
|||| |||| || |||||||| || |||||||||| || ||| || |||
Sbjct 1196 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 1255
Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490
|| || || || ||||| | ||| | || | ||||| || || || ||||||||
Sbjct 1256 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 1315
Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550
|||||||| |||||||| || || || |||| || | || | ||||| || ||||||
Sbjct 1316 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 1375
Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610
||||| || || | || || || | ||||| || ||| |||
Sbjct 1376 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT------ 1417
Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670
| | || ||| | || ||| | || || || | |||||||||||| ||| |
Sbjct 1418 ---GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 1474
Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730
|| || ||| | || |||||||| || ||||| | || ||||| || ||| | | |||
Sbjct 1475 ACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 1534
Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790
|| ||| | ||||| || ||||| || | ||| | |||| | | || | ||
Sbjct 1535 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 1594
Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850
||| | || | ||||| | || || ||||| || || || || || | ||||| |||
Sbjct 1595 GGTTTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 1654
Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910
|||||||| || ||||||||||| ||||| ||||| ||| | || |||||||| | ||
Sbjct 1655 GATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 1714
Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970
|||||| | || |||||| || ||||| ||| | |||| || || || || |||||
Sbjct 1715 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 1774
Query 173971 AGAGGTAACGCACTTTAA 173988
| || ||||| ||||||
Sbjct 1775 CGTGGAAACGCTCTTTAA 1792
>seq32303
Length=834
Score = 266 bits (294), Expect = 4e-66
Identities = 438/632 (69%), Gaps = 0/632 (0%)
Strand=Plus/Minus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||||| |||||||| || | || ||||| |||
Sbjct 736 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 677
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | | | |||||||||||| ||| || |||||
Sbjct 676 CTATTGCTCTTTCCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTT 617
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | || ||| ||| | |||||| ||||| |||
Sbjct 616 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAACTTCTTA 557
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190
|| || ||||| || || |||| | | | ||| | | |||| || |||||
Sbjct 556 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 497
Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250
|||||||||||||| || ||||||| ||| | || || || |||| |||||
Sbjct 496 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGTG 437
Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310
|| | || || | || ||||| |||||||||||| | ||||| ||||| | || ||
Sbjct 436 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 377
Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370
||| | ||||||| || ||| ||||||| |||| | || || || || |
Sbjct 376 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTT 317
Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430
| || | || || |||||||| ||| |||||||||| || ||| || |||
Sbjct 316 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 257
Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490
|| ||||| || ||||| | ||| | || | ||||| || || || ||||||||
Sbjct 256 GTAGCAGCTATATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 197
Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550
|||||||| |||||||| ||||| || || | || | || | ||||| || ||||||
Sbjct 196 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTCAT 137
Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGA 173582
||||| || || | || || || | ||||||
Sbjct 136 GGTGCTACCGTAGAAAATACTTTATTTGAAGA 105
>seq31551
Length=1713
Score = 221 bits (244), Expect = 1e-52
Identities = 307/427 (72%), Gaps = 6/427 (1%)
Strand=Plus/Minus
Query 172387 TTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGA 172446
|| || || ||| ||||| || ||||| ||||| || || || ||| | | |||||
Sbjct 1149 TTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGG 1090
Query 172447 GAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACA 172506
|| || || ||| ||||| || || |||| ||||| ||||||||||||||
Sbjct 1089 GAAACCACAGAAAATGAATCTGCTAATGTAGGTTACAGATTCGGTCAAGAAGAAGAAACT 1030
Query 172507 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 172566
|| || || ||||| || || ||||| ||||| || | |||||||| |||||| | ||
Sbjct 1029 TATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTGTC 970
Query 172567 AACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTA 172626
||||| || | | || ||||||||||| | || ||||| ||| || | |||||
Sbjct 969 AACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTC 910
Query 172627 ACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATC- 172685
|| || | ||||| | || ||||| || || | ||||||||||| |||||||||||
Sbjct 909 ACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAATTTCAACCAATCT 850
Query 172686 --AGTTG-TAG--ATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGA 172740
||||| ||| | | || ||| | | || ||| |||| ||| | ||||| |
Sbjct 849 GTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGATCTCATTAACCGT 790
Query 172741 GCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTT 172800
|| ||||| ||||||||||||||||||||| | ||||| || |||||||| |||||||
Sbjct 789 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCCCTAGACCTA 730
Query 172801 GCTTCTG 172807
||| |||
Sbjct 729 GCTGCTG 723
>seq31730
Length=297
Score = 159 bits (176), Expect = 4e-34
Identities = 207/286 (72%), Gaps = 0/286 (0%)
Strand=Plus/Plus
Query 172160 AGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCAC 172219
|||||||||| | | | | |||||| | || ||||| ||| ||||||||||| |
Sbjct 11 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 70
Query 172220 CTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTG 172279
|||| |||| || |||||| ||| | | || ||| | ||||| || || ||||
Sbjct 71 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTG 130
Query 172280 ATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGC 172339
|||||||||| ||||| || || ||||| |||||||| ||| | || ||||| || ||||
Sbjct 131 ATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 190
Query 172340 ATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTT 172399
| ||||| || ||||| || || |||||| ||| ||||| || | || || || ||
Sbjct 191 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 250
Query 172400 TATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAG 172445
||||| || ||||| ||||| || || || ||| | | |||||
Sbjct 251 TATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 296
>seq31523
Length=225
Score = 147 bits (162), Expect = 3e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536
|| |||| ||||| ||||| |||||||| || || || ||||| || || ||||| |||
Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84
Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTA 172596
|| || | |||||||| |||||| ||||||||| || | | | ||||||||||||
Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144
Query 172597 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTC 172656
|| | || ||||| ||| || | ||||| || || | |||||| | || ||||| |||
Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTC 204
Query 172657 AACCTTAACGGTTTCAACTTC 172677
||||| || |||||||| |||
Sbjct 205 AACCTAAATGGTTTCAATTTC 225
>seq34854
Length=328
Score = 138 bits (152), Expect = 1e-27
Identities = 205/291 (70%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879
||||| | ||| ||||| || | ||| | |||| |||| ||||| ||||| |
Sbjct 32 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 91
Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939
|||||||| || | || ||| | | || || |||| |||||||| || |||
Sbjct 92 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCT 151
Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999
|| || ||||| || || || | ||||| ||| | || ||| | | ||||| |||||
Sbjct 152 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 211
Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059
|| ||||| ||||| || |||| | || || |||||| | || || ||||| ||
Sbjct 212 ATTATCTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATA 271
Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAG 172110
|||||||| ||| | || ||||||||||| ||||| || ||||||||| ||
Sbjct 272 TGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAG 322
>seq85
Length=5226098
Score = 132 bits (146), Expect = 6e-26
Identities = 132/171 (77%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 172636 GGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGAT 172695
|||||| | || ||||| |||||||| || |||||||| ||||||||||| || || |||
Sbjct 1123353 GGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGAT 1123294
Query 172696 GCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATG 172755
| | ||| | || |||||||| ||| || |||| | || ||||| ||||||
Sbjct 1123293 AGTCAAGGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATG 1123234
Query 172756 GAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCT 172806
||||||||||||||| | ||||| || |||||||| ||||||| ||| ||
Sbjct 1123233 GAAGTTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGCTACT 1123183
>seq111
Length=3019079
Score = 125 bits (138), Expect = 8e-24
Identities = 197/282 (70%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 173707 GCATTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATG 173766
|| ||||| || ||| | | ||||| ||| | ||||| || ||||| || | ||| |
Sbjct 6797 GCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTA 6738
Query 173767 TGGACATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTA 173826
|||| | | || | || ||||| || || ||||| | || || ||||| ||
Sbjct 6737 TGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTT 6678
Query 173827 TCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATA 173886
|| || ||||| | ||||| |||||||| || || || ||||||||||| || |||||
Sbjct 6677 TCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATT 6618
Query 173887 CTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTC 173946
|| | || |||||||| | || |||||| | || |||||| || ||||| ||| |
Sbjct 6617 CTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTT 6558
Query 173947 GTATTTCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 173988
|||| || || || || |||| | || ||| | ||||||
Sbjct 6557 ATATTCCCTGAGGAGGTTCTACCCCGTGGAAACCCTCTTTAA 6516
>seq328
Length=921196
Score = 120 bits (132), Expect = 4e-22
Identities = 183/261 (70%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 173683 TTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTCATG 173742
|| ||||| || || ||||| | || ||||| || ||| | | ||||| ||| | |||
Sbjct 671657 TTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 671598
Query 173743 TTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCACTT 173802
|| || ||||| || | ||| | |||| | | || | || ||||| || ||
Sbjct 671597 TTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTG 671538
Query 173803 AACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTC 173862
||||| | || || ||||| || || || ||||| | ||||| |||||||| || ||
Sbjct 671537 AACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTT 671478
Query 173863 GAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTCATCT 173922
|| ||||||||||| || ||||| || | || ||||||| | || |||||| | ||
Sbjct 671477 GAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGCTTGGATGGCGGCT 671418
Query 173923 GTAGATCAACCACATGAGAAC 173943
|||||| || ||||| |||
Sbjct 671417 CAAGATCAGCCTCATGAAAAC 671397
>seq77
Length=8408033
Score = 118 bits (130), Expect = 1e-21
Identities = 248/370 (67%), Gaps = 0/370 (0%)
Strand=Plus/Plus
Query 171925 TTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTC 171984
||||| || || ||||| | ||||| || || || | |||| || | | ||| |
Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754
Query 171985 TTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTC 172044
| ||||| ||||| || ||||| ||||| || ||||| | || || |||||| |
Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTG 2698814
Query 172045 CACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCT 172104
|| | ||||| || | ||||||| || | || ||||||||||| ||||| || ||||||
Sbjct 2698815 CATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCT 2698874
Query 172105 TATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGG 172164
||| || | | | | |||||| | | ||| | | |||||||| | |||||
Sbjct 2698875 TATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 2698934
Query 172165 GAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTA 172224
||||| | | |||||||| | | ||||| ||| ||||||||||| |||||
Sbjct 2698935 GAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 2698994
Query 172225 TCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGT 172284
|| || || ||| ||| | | || ||| | ||||| || | |||| ||
Sbjct 2698995 GCAATTGCTATTATTGTTTTCTTGATCTACCCAATTGGTCACATAAGTTTTTATGATTGT 2699054
Query 172285 ATGCCACTAG 172294
||||| ||||
Sbjct 2699055 ATGCCTCTAG 2699064
>seq231
Length=1485859
Score = 116 bits (128), Expect = 4e-21
Identities = 208/304 (68%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 173650 GAAGAAACTTATAGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCA 173709
|||||||| ||| ||| | || || || | || ||||| || || ||||| | ||
Sbjct 476701 GAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 476642
Query 173710 TTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGG 173769
||||| || ||| | | ||||| || | ||||| || ||||| || | ||| | |||
Sbjct 476641 TTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACCGGTTTATGG 476582
Query 173770 ACATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCT 173829
| | | || | || ||||| || | ||||| | || || |||| || |
Sbjct 476581 ATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAACTTCGTTTGC 476522
Query 173830 CAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTT 173889
|| ||||| | |||||||||||||| || || || |||||||||| || ||||| ||
Sbjct 476521 CAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAAAATATTCTC 476462
Query 173890 CTTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTA 173949
| || ||| |||| | || | |||| | || ||||||||| ||||| ||| | ||
Sbjct 476461 TTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAAAACCTTATA 476402
Query 173950 TTTC 173953
||||
Sbjct 476401 TTTC 476398
>seq203
Length=8626763
Score = 107 bits (118), Expect = 2e-18
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 172181 TAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTG 172240
|||||||| | || ||||| ||| ||||||||||| || || || | || |||||
Sbjct 3756484 TAGGTATGCGCCCTTGGATTGTTGTTGCATATTCAGCTCCGGTTGCAACTGCTACTGCTG 3756425
Query 172241 TGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCT 172300
| ||| | | || ||| | ||||| || ||| | ||||| |||||| ||||| || |
Sbjct 3756424 TTTTCTTGATCTACCCAATTGGTCAAGGAAGATTTTATGATGATATGCCTCTAGGAATTT 3756365
Query 172301 CAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTT 172360
| || | ||||| || ||| | || |||||||| ||||| ||||| || ||| |||| |
Sbjct 3756364 CCAGTGCTTTCAATTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGTATCCAT 3756305
Query 172361 TCCA 172364
| ||
Sbjct 3756304 TGCA 3756301
>seq80
Length=1461076
Score = 107 bits (118), Expect = 2e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752
||| || ||||| || ||||| ||| | || ||||||||||||||||| |||||||||||
Sbjct 1153212 TGGAGCTGATGTTTGCCATCTCAACCTCCACAAGACATTCTGTATTCCTCATGGAGGTGG 1153153
Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTT 159801
|||||||| | || |||||||||||| ||||| || ||||||||
Sbjct 1153152 TGGTCCTGGGATGGGCCCTATTGGTGTAAAGAAACACCTGGCACCATTT 1153104
>seq134
Length=15115857
Score = 93.3 bits (102), Expect = 5e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 171920 TTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTT 171979
|||| ||||||| || ||||| || ||||| || || ||| | | || || | || |
Sbjct 3765944 TTGCCTTCATTGTTGCTCCTCCAGTTGATATTGATGGTATCTGTAAGCCTATTTCTGGAT 3765885
Query 171980 CTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAG 172039
|| | | ||||||||||| || || | || || || |||| | | | | ||||
Sbjct 3765884 CTCTACTTTATGGTAACAATATTATTTATGATGGCATTATTCCTACTCCTACAACTATAG 3765825
Query 172040 GTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTG 172099
|| | || || ||| | || |||||||||||| | || ||||||||||| ||||| |
Sbjct 3765824 GTTTGCATTTTTACTCAATATGGGAAGCAGCATCTGTTGATGAATGGTTATACAACGACA 3765765
Query 172100 GTCCTTATCAG 172110
|||||||| ||
Sbjct 3765764 GTCCTTATGAG 3765754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587783813119360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |