Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq10427 605 3e-168
seq444 587 8e-163
seq32303 403 2e-107
seq31730 253 2e-62
seq31551 226 3e-54
seq231 205 1e-47
seq111 205 1e-47
seq328 194 2e-44
seq34854 179 4e-40
seq203 138 1e-27
seq77 134 2e-26
seq31523 132 5e-26
seq134 111 2e-19
seq31544 96.9 4e-15
seq85 96.9 4e-15
seq151 84.2 2e-11
>seq10427
Length=4047
Score = 605 bits (670), Expect = 3e-168
Identities = 737/1002 (74%), Gaps = 2/1002 (0%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| || ||||||||||| ||||||||||| || | || |||
Sbjct 788 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 847
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | ||| | || |||||| | || || || | || || || |||
Sbjct 848 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 907
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
|||||||| || ||||| ||||||||| | || || || ||| | || || ||||||
Sbjct 908 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 967
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || || | | | |||||| | || | || ||||||||||| ||||||
Sbjct 968 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 1027
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||||||| | || || || ||||||||||| || ||||||||
Sbjct 1028 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 1087
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
|||||||| |||| ||||| ||| | ||||| |||||||| || || ||| || | |
Sbjct 1088 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 1146
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || ||||||||||| || |||||||||||| ||||| ||
Sbjct 1147 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 1206
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || |||||||| ||||||| || || || ||| || || | || ||
Sbjct 1207 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 1266
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 1267 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 1326
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || ||| | |||| | || |||| | || |||||||||| ||| ||
Sbjct 1327 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 1386
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 1387 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 1446
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 1447 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 1506
Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273
|||| || ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 1507 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 1566
Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333
| | |||| ||| | | || | | ||| | ||| | ||||| ||||| ||||||||
Sbjct 1567 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTAGCTTTGAACCTACGTGCCTATGACTT 1626
Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393
|||||||| || ||| | ||||| ||||||||||| |||||||| ||||| || || ||
Sbjct 1627 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 1686
Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453
|| || || ||||||||| ||||||| ||| | || || ||||| |||||||| ||
Sbjct 1687 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 1746
Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || || || || || || ||
Sbjct 1747 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 1788
>seq444
Length=4271
Score = 587 bits (650), Expect = 8e-163
Identities = 717/985 (73%), Gaps = 2/985 (0%)
Strand=Plus/Minus
Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156
||| | || |||||| | |||||||| || | || ||||| || ||| |||||||||||
Sbjct 1105 TGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1046
Query 167157 ACGTTGCTTGCAGCAACCATCTGTTTC-ATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215
|| || | | ||||| ||||||| || ||||| ||| | | ||||||||| || ||
Sbjct 1045 ACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGA 987
Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275
|| |||||||| || ||||| ||| |||| || || | || || ||||| || || ||
Sbjct 986 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTC 927
Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335
||||| || ||||| ||||| |||||||| | || || || || |||||||||||
Sbjct 926 CGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAATCTGGGAAGC 867
Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTT 167395
||| || | || || ||| | ||||| || ||||||| |||| | ||| | |||||
Sbjct 866 TGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTT 807
Query 167396 CCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 167455
| |||| | | ||||||||||||||||||||||| || |||||| |||||
Sbjct 806 TTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 747
Query 167456 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 167515
|||||| ||||| ||||||||| || ||||| || || || || ||||||| ||| |
Sbjct 746 GCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTT 687
Query 167516 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTAC 167575
||||||| | ||||| || ||| ||||| | |||||||| || |||||||||||
Sbjct 686 GATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 627
Query 167576 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 167635
||||||| ||| |||| ||||| || ||||||||||| || |||||||| || || ||
Sbjct 626 TTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACAT 567
Query 167636 GCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 167695
| | || || ||||| ||||||||||| || || || ||||| ||||| ||||| ||||
Sbjct 566 GTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGT 507
Query 167696 TACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTT 167755
|| ||| || | | |||||||| |||| ||| || || | ||||||| ||
Sbjct 506 AACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATT 447
Query 167756 CGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGAT 167815
||| || |||||||| || || ||||| || |||||||| ||||| || || || ||||
Sbjct 446 CGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGAT 387
Query 167816 CTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCC 167875
|||||||| || |||||||| || || || | || |||||||| || || |||||
Sbjct 386 TTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCC 327
Query 167876 TGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGG 167935
|| || ||||| |||| |||||||| || ||
Sbjct 326 GGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGG 267
Query 167936 TTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGA 167995
|||||| |||||||| || | |||||||| || ||| | ||||||||| ||
Sbjct 266 TTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGA 207
Query 167996 CGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 168055
| | ||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct 206 TATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTT 147
Query 168056 CCCTCTCGACCTTGCTGCTGCTGAG 168080
|||||| ||||| ||||||| ||||
Sbjct 146 CCCTCTAGACCTAGCTGCTGTTGAG 122
>seq32303
Length=834
Score = 403 bits (446), Expect = 2e-107
Identities = 523/720 (73%), Gaps = 2/720 (0%)
Strand=Plus/Minus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | | || |||||||||||||| |||||||| || || | || |||
Sbjct 724 GATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 665
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | || | || |||||| | || || || | || || || |||
Sbjct 664 CCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 605
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
||||| || || ||||| ||||||||| |||| || ||||| | ||||| ||||||
Sbjct 604 TATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAACTTCTTAACTGCCGCAGTT 545
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || || | | | |||||| | || | || ||||||||||| ||||||
Sbjct 544 TCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 485
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||| ||| | || || || ||| |||||||||| ||||||||
Sbjct 484 GGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGTGGCTCTCCACGGC 425
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
||||||| ||||| ||||||||| | ||||| |||||||| || || ||| || | |
Sbjct 424 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 366
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || || |||||||| || |||||||||||| || || ||
Sbjct 365 GCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCT 306
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || ||||| || ||||||| || || || ||| || || |||| ||
Sbjct 305 GATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTAT 246
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| || ||| | || || | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 245 ATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 186
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || ||| | ||||| | || | || | || |||||||||| ||| ||
Sbjct 185 GATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTCATGGTGCTACCGT 126
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 125 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 66
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || || || || ||||| || ||||||||
Sbjct 65 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGG 6
>seq31730
Length=297
Score = 253 bits (280), Expect = 2e-62
Identities = 227/285 (80%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 167418 ATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCA 167477
|||||||||||||||||||| || |||||| |||||||| || ||||| |||||||
Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCA 60
Query 167478 TACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGT 167537
|| || ||||| || || || || ||||||| ||| | |||| || | ||||||||
Sbjct 61 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGA 120
Query 167538 TCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTCTTC 167597
||| ||||| | |||||||| || || |||||||| ||||||| |||| |||| |||
Sbjct 121 AGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTC 180
Query 167598 CAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTC 167657
|| || |||||||||||||| |||||||| || || ||| | ||||| ||||| ||||||
Sbjct 181 CAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTC 240
Query 167658 GGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCT 167702
||||| || || |||||||| ||||| ||||| |||| ||||||
Sbjct 241 GGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCT 285
>seq31551
Length=1713
Score = 226 bits (250), Expect = 3e-54
Identities = 303/431 (70%), Gaps = 6/431 (1%)
Strand=Plus/Minus
Query 167655 TTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGT 167714
|||||||| ||||| |||||||| ||||| ||||| |||| |||||| || | |
Sbjct 1149 TTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGG 1090
Query 167715 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACG 167774
|||||||| |||| ||| || || ||||||| |||||||| |||||||| ||
Sbjct 1089 GAAACCACAGAAAATGAATCTGCTAATGTAGGTTACAGATTCGGTCAAGAAGAAGAAACT 1030
Query 167775 TATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 167834
||||| ||||| |||||||||||||| || || || ||||||||||||| || ||
Sbjct 1029 TATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTGTC 970
Query 167835 AACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNN 167894
||||| || || || | || |||||| | || || |||||||| || ||||||||||
Sbjct 969 AACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTC 910
Query 167895 NNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCT 167954
|| || | ||||||||||| |||||||| |||
Sbjct 909 ACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAATTTCAACCAATCT 850
Query 167955 ATCCTTGATAGTTCTGGTAAGGTTC------TGCCTACTTGGGCAGACGTGCTCAACCGT 168008
| |||||||| || || | || | ||| ||||| || | | ||||||
Sbjct 849 GTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGATCTCATTAACCGT 790
Query 168009 GCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTT 168068
||| || ||||||||||||||||| || ||||||||||| |||||||| || |||||
Sbjct 789 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCCCTAGACCTA 730
Query 168069 GCTGCTGCTGA 168079
||||||| |||
Sbjct 729 GCTGCTGTTGA 719
>seq231
Length=1485859
Score = 205 bits (226), Expect = 1e-47
Identities = 239/323 (74%), Gaps = 0/323 (0%)
Strand=Plus/Minus
Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211
||||| | || || |||||||||||||| || || || || || ||||| || ||||||
Sbjct 476710 ACTCAAGCTGAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 476651
Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271
|| |||| || ||||| | ||||| ||||| |||||| | ||||| || || |
Sbjct 476650 GGGGTTGCTTTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACC 476591
Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331
||| | |||| ||| | | || | | ||||| ||| | ||||| ||||| ||| ||
Sbjct 476590 GGTTTATGGATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAAC 476531
Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391
|| |||| ||| |||||| | |||||||||||||| || ||||| || ||||||| |||
Sbjct 476530 TTCGTTTGCCAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAA 476471
Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451
|| || ||||| |||||| || || |||| | | | || || ||||||||||||||
Sbjct 476470 AATATTCTCTTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAA 476411
Query 169452 AACTTTGTGTTCCCTGAGGAAGT 169474
||| || | || | |||||| ||
Sbjct 476410 AACCTTATATTTCTTGAGGAGGT 476388
>seq111
Length=3019079
Score = 205 bits (226), Expect = 1e-47
Identities = 203/263 (77%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 169227 AATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGT 169286
||||| | ||||| |||||||||||| | ||||| || || | ||| | |||| |||
Sbjct 6788 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 6729
Query 169287 TCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAG 169346
| | || | | ||||| ||||| ||||| ||||| |||||||| |||||||| |||
Sbjct 6728 GCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAG 6669
Query 169347 ATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAAC 169406
||| | ||||| |||||||| || ||||| || ||||||||||| || || ||||| |||
Sbjct 6668 ATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAAC 6609
Query 169407 GAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCT 169466
|||||| ||||||| ||| | || || ||||| |||||||| ||| || | ||||||
Sbjct 6608 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 6549
Query 169467 GAGGAAGTACTTCCCCGAGGTAA 169489
||||| || || ||||| || ||
Sbjct 6548 GAGGAGGTTCTACCCCGTGGAAA 6526
>seq328
Length=921196
Score = 194 bits (214), Expect = 2e-44
Identities = 209/277 (75%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 169182 ACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTG 169241
|| || || || || ||||| || |||||||| |||| || ||||| | |||||
Sbjct 671669 ACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 671610
Query 169242 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATT 169301
|||||||||||| | ||||| || || | ||| | |||| ||| | | || | |
Sbjct 671609 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 671550
Query 169302 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAA 169361
||||| ||||| ||||| ||||| |||||||| |||||||| |||||| | ||||| |||
Sbjct 671549 GGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGAA 671490
Query 169362 GATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCA 169421
||||| || ||||| || ||||||||||| || || ||||| ||| ||||| |||||||
Sbjct 671489 GATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGCT 671430
Query 169422 TGGTTAGCACCTATTGATCAACCTCATGAGAACTTTG 169458
||| | || || ||||| |||||||| ||| |||
Sbjct 671429 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTG 671393
>seq34854
Length=328
Score = 179 bits (198), Expect = 4e-40
Identities = 208/278 (75%), Gaps = 2/278 (1%)
Strand=Plus/Plus
Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156
||| | |||||||| | |||||||| || | || ||||| || ||| |||||||||||
Sbjct 41 TGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 100
Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215
|| || | | |||| | ||||| || || || |||||| | | ||||||||| || ||
Sbjct 101 ACCTTATTGACCGCAA-CTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGA 159
Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275
|| |||||||| || ||||| ||| |||| || || | ||||| ||||| || |||||
Sbjct 160 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTC 219
Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335
||||| || ||||| ||||| ||||| ||| | || || || || || ||||||||
Sbjct 220 GGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGC 279
Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTT 167373
||| | | || || ||||| ||||| || |||||||
Sbjct 280 GGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTT 317
>seq203
Length=8626763
Score = 138 bits (152), Expect = 1e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 167415 TATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTT 167474
|| |||||| ||||| |||||| || |||||| |||||||| || ||||| ||||
Sbjct 3756518 TACATGGGTTATGAGTAGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTT 3756459
Query 167475 GCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAA 167534
||||| || ||||| || || | || ||||||| ||| | |||| || | ||||||
Sbjct 3756458 GCATATTCAGCTCCGGTTGCAACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 3756399
Query 167535 GGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTC 167594
|| || | ||| | |||||||| || || || || | ||||| | |||| ||||
Sbjct 3756398 GGAAGATTTTATGATGATATGCCTCTAGGAATTTCCAGTGCTTTCAATTTCATGATTGTA 3756339
Query 167595 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCAT 167633
|||||||| |||||||||||||| ||| | || || |||
Sbjct 3756338 TTCCAAGCTGAGCACAACATCCTTATGTATCCATTGCAT 3756300
Score = 82.4 bits (90), Expect = 9e-11
Identities = 125/173 (72%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 167600 AGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCG-TTGCTGGCGTATTCG 167658
|| |||||||||||| || |||||| || || ||| || | | | | ||| ||||| |
Sbjct 3392205 AGTAGAGCACAACATTCTTATGCACTTATTTCACATG-TCAGAGATAGTTGGTGTATTTG 3392147
Query 167659 GCGG-TTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAA 167717
| || ||||| ||||| | ||||| | |||| |||| |||||| || || | |||
Sbjct 3392146 GGGGCTTCTC-GTTCAATTTTATGCATGCTTCTTTGGTAACCTCTAGTTTGATTAGGGAA 3392088
Query 167718 ACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGA 167770
|| | |||| ||| ||| || | |||||||| |||||||| || |||||
Sbjct 3392087 ACTATAGAAAATGAATCCACTAATGAAGGTTACAAATTCGGTCAAGAGGAAGA 3392035
>seq77
Length=8408033
Score = 134 bits (148), Expect = 2e-26
Identities = 211/302 (70%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 167193 TTCGTCGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTC 167252
||| | | ||||||||| | || || |||||||| ||| |||| || | | || ||
Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754
Query 167253 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTT 167312
| ||||| ||||| || ||||| ||||| || |||| ||||| ||||| ||| |
Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTG 2698814
Query 167313 CACTTCTATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCT 167372
|| | || || || | ||||||| || | | || || ||||| ||||| || ||||||
Sbjct 2698815 CATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCT 2698874
Query 167373 TTCCAACTCGTAGTTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGG 167432
| | || | || | |||||| | |||| | | || |||||||||||||||
Sbjct 2698875 TATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 2698934
Query 167433 GAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTC 167492
||||| || ||||| |||||| | | ||||| ||||||||| || ||||| ||
Sbjct 2698935 GAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 2698994
Query 167493 GC 167494
||
Sbjct 2698995 GC 2698996
>seq31523
Length=225
Score = 132 bits (146), Expect = 5e-26
Identities = 118/148 (80%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 167745 GGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTC 167804
||||||| |||||||| || ||||| || ||||| ||||| |||||||||||||| ||
Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84
Query 167805 GGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTG 167864
|| || ||||||||||||| || |||||||| || || || | ||||||||| |
Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144
Query 167865 GCAGCATGGCCTGTTGTTGGTATCTGGT 167892
|| || |||||||| || ||||||||||
Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGT 172
>seq134
Length=15115857
Score = 111 bits (122), Expect = 2e-19
Identities = 186/265 (70%), Gaps = 3/265 (1%)
Strand=Plus/Minus
Query 167133 TGGTTCGGCGTTCTGATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGC 167191
||||| || ||| ||||||||||||| || ||| || | ||| | || || || ||
Sbjct 3765998 TGGTTTGGTGTTTTGATGATCCCTACCTTA-TTGACTCAGCT-TCTATATTTATTATTGC 3765941
Query 167192 CTTCGTCGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACT 167251
|||| | | ||||||||| || || || ||||||||| | | || || |||| || ||
Sbjct 3765940 CTTCATTGTTGCTCCTCCAGTTGATATTGATGGTATCTGTAAGCCTATTTCTGGATCTCT 3765881
Query 167252 CATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCT 167311
| ||||||||||| || || | || || || ||||| || ||| |||| ||| |
Sbjct 3765880 ACTTTATGGTAACAATATTATTTATGATGGCATTATTCCTACTCCTACAACTATAGGTTT 3765821
Query 167312 TCACTTCTATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCC 167371
|| || || | || |||||||||||| | | || || ||||| ||||| | ||||
Sbjct 3765820 GCATTTTTACTCAATATGGGAAGCAGCATCTGTTGATGAATGGTTATACAACGACAGTCC 3765761
Query 167372 TTTCCAACTCGTAGTTTTCCACTTC 167396
|| | || | ||| | ||||||
Sbjct 3765760 TTATGAGCTAATTGTTCTACACTTC 3765736
>seq31544
Length=164
Score = 96.9 bits (106), Expect = 4e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 167984 TACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 168043
||| ||||| || | | || |||||| ||| ||||||||||||||||| || |||||
Sbjct 37 TACCTGGGCTGATATTATTAATCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAA 96
Query 168044 TGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079
|||||| ||||||||||| ||||| ||||||| |||
Sbjct 97 TGCTCATAACTTCCCTCTAGACCTAGCTGCTGTTGA 132
>seq85
Length=5226098
Score = 96.9 bits (106), Expect = 4e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 167922 TTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTG 167981
|||||||| || |||||||| |||||||| || | |||||||| ||| || |
Sbjct 1123335 TTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATT 1123276
Query 167982 CCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGT 168041
||| |||| || | | || ||||| || ||||||||||||||||| || ||
Sbjct 1123275 AATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATGGAAGTTATGCATGAATGT 1123216
Query 168042 AATGCTCACAACTTCCCTCTCGACCTTGCTGCT 168074
|||||||| ||||||||||| ||||| ||| ||
Sbjct 1123215 AATGCTCATAACTTCCCTCTAGACCTAGCTACT 1123183
>seq151
Length=2833985
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 167766 GAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATAC 167825
||||| || ||||| ||||| |||||||||||||| || || || ||||||||| |||
Sbjct 2328018 GAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCTATAT 2328077
Query 167826 GCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGC 167869
|| |||||||| || || ||| | ||||||||| | || ||
Sbjct 2328078 GCTAGTTTCAACAATTCTCGTTCGTTACACTTCTTCCTAGCTGC 2328121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560353091542400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |