Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq203 131 1e-24
seq116 123 2e-22
seq49 120 2e-21
seq809 104 2e-16
seq91 104 2e-16
seq652 102 7e-16
seq24 91.5 1e-12
seq46 86.0 5e-11
>seq203
Length=8626763
Score = 131 bits (144), Expect = 1e-24
Identities = 165/222 (74%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||||||| ||||| || ||||| ||| ||||| |||||||| || || || ||
Sbjct 5730832 GAGACGGAGGACAAGGTGGAGGGTCGATTCCTTTTGG--ATATTGTAGTCGGCCAGTGTC 5730775
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
|| ||||||||||||||| || ||||| || || |||||||| || |||||||| ||
Sbjct 5730774 CTGCCATCTTCAAGTTGTTTACCCGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCC 5730715
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAG 563432
||||| || |||||||| || || || || || || | | | || |||||
Sbjct 5730714 TCTTTGTCCTGAATTTTAGCCTTCACATTGTCGATGGTGTCGGAGCTTTCGAC-CTCGAG 5730656
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||||| || || ||||||||||| || |||||||| |||||
Sbjct 5730655 AGTAATTGTCTTCCCAGTAAGAGTCTTCACGAAAATCTGCAT 5730614
Score = 107 bits (118), Expect = 2e-17
Identities = 169/238 (71%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
|||||||||||| || | || |||||| || || ||| || ||||| || | ||
Sbjct 5730151 CCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAGGT 5730092
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
|| ||||||||| || || || ||||| ||||| || ||||| || ||||| || ||
Sbjct 5730091 TCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATCCC 5730032
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGA 563431
||| || |||||||||||| |||||| || ||||| || | | | || || |
Sbjct 5730031 TTCCTTGTCTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCAC-CTCAA 5729973
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT-AGACATCTTGGTTA 563488
| || | || || || ||||| ||||| || || |||||||| || ||| || |||
Sbjct 5729972 GGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCATCTGAAATCATGATTA 5729915
>seq116
Length=10441785
Score = 123 bits (136), Expect = 2e-22
Identities = 521/810 (64%), Gaps = 16/810 (2%)
Strand=Plus/Minus
Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846
||| ||| | || |||||||| || || ||||| || ||| |||| | ||| | |||
Sbjct 2151841 TGGTGATACCCACCTTGGTGGAGAGGACTTTGACAACAGAATGGTCAACCAT--TTTGTC 2151784
Query 551847 GAAGATTTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904
|||| || || | || ||||| || ||| | | || | | | ||| || |
Sbjct 2151783 CAAGAGTTCAAGAGGAAGAACAAGAAGGACATC-AGCGGCAACC-CTAGAGCCCTCAGGA 2151726
Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964
| | || || |||||||||| ||||| | | || |||||| | | || ||||| |
Sbjct 2151725 GGTTGAGGACATCTTGCGAAAGGGCCAAGAGGACACTCTCATCTACTGCGCAGACCACCA 2151666
Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024
||||| | ||||| || | |||||| ||||||| | || | || | | |||| ||
Sbjct 2151665 TTGAAATTGATTCCTTGTATGAGGGTATTGATTTCTACTCGACCATCACCCGTGCCAGAT 2151606
Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTA 552083
| || || | || || || || || || || || || || |||| |||
Sbjct 2151605 TCGAGGAGCTCAACATGGACCTTTTCAGGAAGTGTATGGAGCCGGTTGAG-AAGTGTTTG 2151547
Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143
|| ||| | ||||| ||||| | || ||||| ||| |||||||| || || ||
Sbjct 2151546 AGGGATGCCAAGATGGATAAGAGTACTGTCCATGATGCTGTCCTTGTTGGAGGTTCAACC 2151487
Query 552144 AGAATTCCTAAAATTC-GCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202
|| ||||| || ||| || | | || || || |||||| || || | ||
Sbjct 2151486 AGGATTCCCAAGGTTCAGCAGCTTCTGCAGGATTTCTT-CAATGGCAAGGAACTT--TGC 2151430
Query 552203 AAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260
||| | |||| ||||||||||| ||||||||||| || || ||||||| || || |
Sbjct 2151429 AAGAGCATTAACCCAGATGAGGCCGTTGCCTATGGCGCTGCTGTTCAAGCTGCCATCTTG 2151370
Query 552261 TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320
||| | |||| ||| | || || | | ||| | ||||| || || || ||
Sbjct 2151369 AGTGGTGAGGGCAATGAGAAAGTGCAGGATCTCTTGCTTTTGGATGTCACCCCACTCTCC 2151310
Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380
|||||| | || || | || ||| | |||||| | ||| || || || || ||
Sbjct 2151309 CTTGGTCTCGAGACTGCCGGTGGTGTCATGACTGTGTTGATCCCAAGGAACACCACCATC 2151250
Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440
||| || || | || || ||||| || ||||| || || ||| || ||
Sbjct 2151249 CCTACAAAGAAGGAGCAAGTTTTCTCTACCTACTCAGACAACCAGCCTGGAGTGCTCATC 2151190
Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500
|| | | |||||| || |||| || | || || || | | |||| ||| |
Sbjct 2151189 CAGGTCTATGAAGGTGAGAGAACGAGGACCAGGGACAACAACCTGTTGGGTAAATTTGAG 2151130
Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560
| ||| ||||| || |||||| | || || || |||||| || ||||| ||
Sbjct 2151129 CTCTCAGGCATTCCCCCGGCTCCTAGGGGCGTCCCTCAAATTACCGTGTGCTTCGACATT 2151070
Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCT 552590
|| |||||||| || ||||| ||| |||||
Sbjct 2151069 GACGCCAATGGTATCTTGAACGTGTCTGCT 2151040
>seq49
Length=4798478
Score = 120 bits (132), Expect = 2e-21
Identities = 162/224 (72%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| ||||| || || | ||||| || ||| | | ||| || || ||||| || |||
Sbjct 2870135 CCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGG--ATGTTATAATCTGCCAGA 2870078
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| || |||||| || ||||| || ||||||||||| || |||||||| || |||||
Sbjct 2870077 GTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATG 2870018
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG 563430
|||||||| || ||||||||| ||| || || || || |||| | | |||
Sbjct 2870017 CCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTCTCAACTTCC 2869958
Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| ||| | ||||| |||||||| || || || || ||||||||
Sbjct 2869957 AAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCAT 2869914
Score = 114 bits (126), Expect = 1e-19
Identities = 161/224 (72%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| || || || || | ||||| || ||| | | ||| || |||||||| || | |
Sbjct 2841079 CCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCTTTCTGG--ATGTTGTAATCCGCCAAA 2841022
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| || |||||| || ||||| |||||||||||||| || |||||||| || |||||
Sbjct 2841021 GTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGCTGATCCGGGGGAATG 2840962
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG 563430
||||| || || |||||||| ||| || || || || |||| | | |||
Sbjct 2840961 CCTTCCTTGTCCTGAATTTTCGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACTTCC 2840902
Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| ||| | ||||| |||||||| || || || |||||||||||
Sbjct 2840901 AAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCAT 2840858
Score = 113 bits (124), Expect = 4e-19
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| |||||||| || | ||| || |||||| || ||||| || ||||||||||| ||
Sbjct 2847027 ATGTTGTAATCCGCCAAAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTC 2846968
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|||||||| || ||||| ||||| || || ||||||||| ||| || || || ||
Sbjct 2846967 TGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATTTTTGCTTTGACGTTGTCGATGGTG 2846908
Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472
|||| | | ||| | ||| | ||||| |||||||| || || || |||||||||
Sbjct 2846907 TCAGAGCTCTCAACTTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGC 2846848
Query 563473 AT 563474
||
Sbjct 2846847 AT 2846846
Score = 95.1 bits (104), Expect = 1e-13
Identities = 100/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || || ||||| ||| | || || || |||||||||||||||
Sbjct 895655 ACTGTTCCTGCTTACTTCAACGACTCGCAAAGGACTGCAACAAAGGATGCTGGACGTATT 895714
Query 550469 GCTGGACTTA-ATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
||||| |||| | || || || ||||| ||||||||||||||||| |||| || |||||
Sbjct 895715 GCTGG-CTTAGAAGTGCTCCGCATTATTAATGAACCTACTGCTGCATCACTGGCTTATGG 895773
Query 550528 ACTTGATAA 550536
|||| ||
Sbjct 895774 TTTTGAAAA 895782
Score = 91.5 bits (100), Expect = 1e-12
Identities = 133/185 (72%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| ||||||||||| | ||| | ||| || || || || || ||||| || || |||
Sbjct 2845933 ATGTTGTAATCAGCCAAAGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTT 2845874
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
||||| ||||| |||||||| || || ||||| || || ||||| ||||||||
Sbjct 2845873 TGCTGGTCAGGGGGAATTCCCTCCTTGTCTTGTATCTTGGCCTTTACATTGTCAATTGTG 2845814
Query 563413 TC---AGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469
|| | | | | || || || || | || || |||||||||||||| ||||| |||
Sbjct 2845813 TCTGAACTCTCA--AC-CTCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATT 2845757
Query 563470 TGCAT 563474
|||||
Sbjct 2845756 TGCAT 2845752
Score = 89.7 bits (98), Expect = 4e-12
Identities = 155/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| |||||||| || || ||| |||| |||||||||||| || || || |
Sbjct 2841303 AGACGGAGGACAAGATGGAGCGTCGACTCCTTTTG--AATATTGTAATCGGCCAGTGTCC 2841246
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
||| || || ||||| || |||||||| | | ||||| || || ||||| ||||
Sbjct 2841245 GGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGAATGCCTT 2841186
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGA 563433
| || || || || || ||| || ||||| || || | | | || ||| | |
Sbjct 2841185 CCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCGAC-TTCCAAA 2841127
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | ||| || ||||| ||||| || || ||||| |||||
Sbjct 2841126 GTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCAT 2841086
Score = 87.8 bits (96), Expect = 1e-11
Identities = 104/139 (75%), Gaps = 4/139 (3%)
Strand=Plus/Minus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAG 563311
|| ||||| || || | ||||||||| ||| ||||| || ||||||||||| || |
Sbjct 2846200 CTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGG--ATGTTGTAATCAGCCAGGG 2846143
Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371
| | ||| || || || || || ||||| || || || ||||| |||||||| ||||
Sbjct 2846142 TGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTC 2846083
Query 563372 CTTCTTTATCTTGAATTTT 563390
| ||||| |||||||| ||
Sbjct 2846082 CCTCTTTGTCTTGAATCTT 2846064
Score = 87.8 bits (96), Expect = 1e-11
Identities = 156/225 (69%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
|||||| || || || | || ||||| ||| || || ||||||||||| | |||
Sbjct 2869451 CCTGAGGCGAAGAACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGT 2869392
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| ||| || || || || || ||||| || || |||||||| |||||||| |||||
Sbjct 2869391 GCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCAGGAGGGATTCC 2869332
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTC 563429
|| || |||||||| || ||||| || ||||| || | | | | || ||
Sbjct 2869331 CTCCTTGTCTTGAATCTTGGCCTTTACATTGTCGATTGTGTCTGAACTCTCA--AC-CTC 2869275
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | || || |||||||||||||| || || || |||||
Sbjct 2869274 AAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 2869230
>seq809
Length=1236355
Score = 104 bits (114), Expect = 2e-16
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
||||| | ||||| ||||| || || ||||| || || | ||||||||| ||||||
Sbjct 228970 GCAGTGGTGACTGTTCCAGCTTACTTCAATGATTCGCAGAGGACAGCTACTAAGGATGCT 229029
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| ||||||||||| | | |||||||| || ||||||||||||||||| || | |
Sbjct 229030 GGTCGTATTGCTGGCTTGGAAGTTCTTCGCATAATCAATGAACCTACTGCGGCGTCCTTG 229089
Query 550520 GCATATGGACTTGATAA 550536
|| |||||| |||| ||
Sbjct 229090 GCTTATGGATTTGAGAA 229106
>seq91
Length=4251426
Score = 104 bits (114), Expect = 2e-16
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
||||| | ||||| ||||| || || ||||| || || | ||||||||| ||||||
Sbjct 2877490 GCAGTGGTGACTGTTCCAGCTTACTTCAATGATTCGCAGAGGACAGCTACTAAGGATGCT 2877549
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| ||||||||||| | | |||||||| || ||||||||||| |||||||| | |
Sbjct 2877550 GGTCGTATTGCTGGCTTGGAAGTTCTTCGCATAATCAATGAACCCACTGCTGCGTCCTTG 2877609
Query 550520 GCATATGGACTTGATAA 550536
|| |||||| |||| ||
Sbjct 2877610 GCTTATGGATTTGAGAA 2877626
>seq652
Length=2384379
Score = 102 bits (112), Expect = 7e-16
Identities = 158/224 (71%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
|||||||||||| || | || ||||| ||| || ||| || |||||||| | |||
Sbjct 464595 CCTGAGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAAAGT 464536
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | ||| ||||| || || || ||||| ||||| || ||||| || || || |||||
Sbjct 464535 GCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGGATTCC 464476
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCG 563430
||| || ||||| || || || || |||| ||| || || | || ||
Sbjct 464475 TTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAACTGTGTC--TGAACTTTCAACCTCA 464418
Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | || || |||||||| ||||| ||||||||||||||
Sbjct 464417 AGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTGCAT 464374
Score = 98.7 bits (108), Expect = 8e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
|| || ||||| || | ||| || ||| ||||||||||| |||||||| ||||| |||
Sbjct 465239 ATGTTATAATCCGCCAAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTT 465180
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|||||||| || ||||| ||||| || || |||||||| ||| || ||||| ||
Sbjct 465179 TGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTG 465120
Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472
|||| | | ||| | || | || || ||||| || || || || || ||||||
Sbjct 465119 TCAGAGCTCTCAACTTCCAAGGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTGC 465060
Query 563473 AT 563474
||
Sbjct 465059 AT 465058
>seq24
Length=10012559
Score = 91.5 bits (100), Expect = 1e-12
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 550392 TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTA 550451
||| | |||| || | || || || || || ||||||||||| || || || || || |
Sbjct 6147325 TTAAGAATGCGGTCGTCACCGTCCCTGCCTACTTTAATGACTCTCAGCGGCAGGCCACCA 6147266
Query 550452 AAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTG 550511
| |||||||| || ||||| || ||||| | ||||| || ||||| ||||||||||
Sbjct 6147265 AGGATGCTGGTGTCATCGCTGGCCTCAATGTCATGCGTATCATAAATGAGCCTACTGCTG 6147206
Query 550512 CTGCACTTGCATATGGACTTGATAA 550536
| || |||| ||||| || || ||
Sbjct 6147205 CGGCCATTGCTTATGGTCTCGACAA 6147181
>seq46
Length=3638525
Score = 86.0 bits (94), Expect = 5e-11
Identities = 90/117 (77%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475
|||| || || || || | || | |||||||| || || ||||| |||||||||||
Sbjct 2089918 CAGCCTACTTCAACGATGCCCAGAGGCAAGCTACCAAGGACGCTGGTGTTATTGCTGGAC 2089977
Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532
| |||||| | | |||||||||||||| ||||||||||| |||| || || ||||
Sbjct 2089978 TCAATGTTGCTAGAATTATCAATGAACCCACTGCTGCTGCCATTGCGTACGG-CTTG 2090033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4027372273064240
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