Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq203 131 1e-24 seq116 123 2e-22 seq49 120 2e-21 seq809 104 2e-16 seq91 104 2e-16 seq652 102 7e-16 seq24 91.5 1e-12 seq46 86.0 5e-11 >seq203 Length=8626763 Score = 131 bits (144), Expect = 1e-24 Identities = 165/222 (74%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| ||||| || ||||| ||| ||||| |||||||| || || || || Sbjct 5730832 GAGACGGAGGACAAGGTGGAGGGTCGATTCCTTTTGG--ATATTGTAGTCGGCCAGTGTC 5730775 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || ||||||||||||||| || ||||| || || |||||||| || |||||||| || Sbjct 5730774 CTGCCATCTTCAAGTTGTTTACCCGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCC 5730715 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAG 563432 ||||| || |||||||| || || || || || || | | | || ||||| Sbjct 5730714 TCTTTGTCCTGAATTTTAGCCTTCACATTGTCGATGGTGTCGGAGCTTTCGAC-CTCGAG 5730656 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || ||||||||||| || |||||||| ||||| Sbjct 5730655 AGTAATTGTCTTCCCAGTAAGAGTCTTCACGAAAATCTGCAT 5730614 Score = 107 bits (118), Expect = 2e-17 Identities = 169/238 (71%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 |||||||||||| || | || |||||| || || ||| || ||||| || | || Sbjct 5730151 CCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAGGT 5730092 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 || ||||||||| || || || ||||| ||||| || ||||| || ||||| || || Sbjct 5730091 TCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATCCC 5730032 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGA 563431 ||| || |||||||||||| |||||| || ||||| || | | | || || | Sbjct 5730031 TTCCTTGTCTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCAC-CTCAA 5729973 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT-AGACATCTTGGTTA 563488 | || | || || || ||||| ||||| || || |||||||| || ||| || ||| Sbjct 5729972 GGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCATCTGAAATCATGATTA 5729915 >seq116 Length=10441785 Score = 123 bits (136), Expect = 2e-22 Identities = 521/810 (64%), Gaps = 16/810 (2%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 ||| ||| | || |||||||| || || ||||| || ||| |||| | ||| | ||| Sbjct 2151841 TGGTGATACCCACCTTGGTGGAGAGGACTTTGACAACAGAATGGTCAACCAT--TTTGTC 2151784 Query 551847 GAAGATTTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 |||| || || | || ||||| || ||| | | || | | | ||| || | Sbjct 2151783 CAAGAGTTCAAGAGGAAGAACAAGAAGGACATC-AGCGGCAACC-CTAGAGCCCTCAGGA 2151726 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | | || || |||||||||| ||||| | | || |||||| | | || ||||| | Sbjct 2151725 GGTTGAGGACATCTTGCGAAAGGGCCAAGAGGACACTCTCATCTACTGCGCAGACCACCA 2151666 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 ||||| | ||||| || | |||||| ||||||| | || | || | | |||| || Sbjct 2151665 TTGAAATTGATTCCTTGTATGAGGGTATTGATTTCTACTCGACCATCACCCGTGCCAGAT 2151606 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTA 552083 | || || | || || || || || || || || || || |||| ||| Sbjct 2151605 TCGAGGAGCTCAACATGGACCTTTTCAGGAAGTGTATGGAGCCGGTTGAG-AAGTGTTTG 2151547 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 || ||| | ||||| ||||| | || ||||| ||| |||||||| || || || Sbjct 2151546 AGGGATGCCAAGATGGATAAGAGTACTGTCCATGATGCTGTCCTTGTTGGAGGTTCAACC 2151487 Query 552144 AGAATTCCTAAAATTC-GCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 || ||||| || ||| || | | || || || |||||| || || | || Sbjct 2151486 AGGATTCCCAAGGTTCAGCAGCTTCTGCAGGATTTCTT-CAATGGCAAGGAACTT--TGC 2151430 Query 552203 AAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 ||| | |||| ||||||||||| ||||||||||| || || ||||||| || || | Sbjct 2151429 AAGAGCATTAACCCAGATGAGGCCGTTGCCTATGGCGCTGCTGTTCAAGCTGCCATCTTG 2151370 Query 552261 TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 ||| | |||| ||| | || || | | ||| | ||||| || || || || Sbjct 2151369 AGTGGTGAGGGCAATGAGAAAGTGCAGGATCTCTTGCTTTTGGATGTCACCCCACTCTCC 2151310 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 |||||| | || || | || ||| | |||||| | ||| || || || || || Sbjct 2151309 CTTGGTCTCGAGACTGCCGGTGGTGTCATGACTGTGTTGATCCCAAGGAACACCACCATC 2151250 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 ||| || || | || || ||||| || ||||| || || ||| || || Sbjct 2151249 CCTACAAAGAAGGAGCAAGTTTTCTCTACCTACTCAGACAACCAGCCTGGAGTGCTCATC 2151190 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 || | | |||||| || |||| || | || || || | | |||| ||| | Sbjct 2151189 CAGGTCTATGAAGGTGAGAGAACGAGGACCAGGGACAACAACCTGTTGGGTAAATTTGAG 2151130 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 | ||| ||||| || |||||| | || || || |||||| || ||||| || Sbjct 2151129 CTCTCAGGCATTCCCCCGGCTCCTAGGGGCGTCCCTCAAATTACCGTGTGCTTCGACATT 2151070 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCT 552590 || |||||||| || ||||| ||| ||||| Sbjct 2151069 GACGCCAATGGTATCTTGAACGTGTCTGCT 2151040 >seq49 Length=4798478 Score = 120 bits (132), Expect = 2e-21 Identities = 162/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || | ||||| || ||| | | ||| || || ||||| || ||| Sbjct 2870135 CCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGG--ATGTTATAATCTGCCAGA 2870078 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || || |||||| || ||||| || ||||||||||| || |||||||| || ||||| Sbjct 2870077 GTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATG 2870018 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG 563430 |||||||| || ||||||||| ||| || || || || |||| | | ||| Sbjct 2870017 CCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTCTCAACTTCC 2869958 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||| | ||||| |||||||| || || || || |||||||| Sbjct 2869957 AAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCAT 2869914 Score = 114 bits (126), Expect = 1e-19 Identities = 161/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| || || || || | ||||| || ||| | | ||| || |||||||| || | | Sbjct 2841079 CCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCTTTCTGG--ATGTTGTAATCCGCCAAA 2841022 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || || |||||| || ||||| |||||||||||||| || |||||||| || ||||| Sbjct 2841021 GTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGCTGATCCGGGGGAATG 2840962 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG 563430 ||||| || || |||||||| ||| || || || || |||| | | ||| Sbjct 2840961 CCTTCCTTGTCCTGAATTTTCGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACTTCC 2840902 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||| | ||||| |||||||| || || || ||||||||||| Sbjct 2840901 AAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCAT 2840858 Score = 113 bits (124), Expect = 4e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| || | ||| || |||||| || ||||| || ||||||||||| || Sbjct 2847027 ATGTTGTAATCCGCCAAAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTC 2846968 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 |||||||| || ||||| ||||| || || ||||||||| ||| || || || || Sbjct 2846967 TGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATTTTTGCTTTGACGTTGTCGATGGTG 2846908 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 |||| | | ||| | ||| | ||||| |||||||| || || || ||||||||| Sbjct 2846907 TCAGAGCTCTCAACTTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGC 2846848 Query 563473 AT 563474 || Sbjct 2846847 AT 2846846 Score = 95.1 bits (104), Expect = 1e-13 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || || ||||| ||| | || || || ||||||||||||||| Sbjct 895655 ACTGTTCCTGCTTACTTCAACGACTCGCAAAGGACTGCAACAAAGGATGCTGGACGTATT 895714 Query 550469 GCTGGACTTA-ATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| |||| | || || || ||||| ||||||||||||||||| |||| || ||||| Sbjct 895715 GCTGG-CTTAGAAGTGCTCCGCATTATTAATGAACCTACTGCTGCATCACTGGCTTATGG 895773 Query 550528 ACTTGATAA 550536 |||| || Sbjct 895774 TTTTGAAAA 895782 Score = 91.5 bits (100), Expect = 1e-12 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||||||||| | ||| | ||| || || || || || ||||| || || ||| Sbjct 2845933 ATGTTGTAATCAGCCAAAGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTT 2845874 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||| ||||| |||||||| || || ||||| || || ||||| |||||||| Sbjct 2845873 TGCTGGTCAGGGGGAATTCCCTCCTTGTCTTGTATCTTGGCCTTTACATTGTCAATTGTG 2845814 Query 563413 TC---AGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 || | | | | || || || || | || || |||||||||||||| ||||| ||| Sbjct 2845813 TCTGAACTCTCA--AC-CTCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATT 2845757 Query 563470 TGCAT 563474 ||||| Sbjct 2845756 TGCAT 2845752 Score = 89.7 bits (98), Expect = 4e-12 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| |||||||| || || ||| |||| |||||||||||| || || || | Sbjct 2841303 AGACGGAGGACAAGATGGAGCGTCGACTCCTTTTG--AATATTGTAATCGGCCAGTGTCC 2841246 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||| || || ||||| || |||||||| | | ||||| || || ||||| |||| Sbjct 2841245 GGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGAATGCCTT 2841186 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGA 563433 | || || || || || ||| || ||||| || || | | | || ||| | | Sbjct 2841185 CCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCGAC-TTCCAAA 2841127 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||| || ||||| ||||| || || ||||| ||||| Sbjct 2841126 GTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCAT 2841086 Score = 87.8 bits (96), Expect = 1e-11 Identities = 104/139 (75%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAG 563311 || ||||| || || | ||||||||| ||| ||||| || ||||||||||| || | Sbjct 2846200 CTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGG--ATGTTGTAATCAGCCAGGG 2846143 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | ||| || || || || || ||||| || || || ||||| |||||||| |||| Sbjct 2846142 TGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTC 2846083 Query 563372 CTTCTTTATCTTGAATTTT 563390 | ||||| |||||||| || Sbjct 2846082 CCTCTTTGTCTTGAATCTT 2846064 Score = 87.8 bits (96), Expect = 1e-11 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 |||||| || || || | || ||||| ||| || || ||||||||||| | ||| Sbjct 2869451 CCTGAGGCGAAGAACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGT 2869392 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | ||| || || || || || ||||| || || |||||||| |||||||| ||||| Sbjct 2869391 GCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCAGGAGGGATTCC 2869332 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTC 563429 || || |||||||| || ||||| || ||||| || | | | | || || Sbjct 2869331 CTCCTTGTCTTGAATCTTGGCCTTTACATTGTCGATTGTGTCTGAACTCTCA--AC-CTC 2869275 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || |||||||||||||| || || || ||||| Sbjct 2869274 AAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 2869230 >seq809 Length=1236355 Score = 104 bits (114), Expect = 2e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| | ||||| ||||| || || ||||| || || | ||||||||| |||||| Sbjct 228970 GCAGTGGTGACTGTTCCAGCTTACTTCAATGATTCGCAGAGGACAGCTACTAAGGATGCT 229029 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || ||||||||||| | | |||||||| || ||||||||||||||||| || | | Sbjct 229030 GGTCGTATTGCTGGCTTGGAAGTTCTTCGCATAATCAATGAACCTACTGCGGCGTCCTTG 229089 Query 550520 GCATATGGACTTGATAA 550536 || |||||| |||| || Sbjct 229090 GCTTATGGATTTGAGAA 229106 >seq91 Length=4251426 Score = 104 bits (114), Expect = 2e-16 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| | ||||| ||||| || || ||||| || || | ||||||||| |||||| Sbjct 2877490 GCAGTGGTGACTGTTCCAGCTTACTTCAATGATTCGCAGAGGACAGCTACTAAGGATGCT 2877549 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || ||||||||||| | | |||||||| || ||||||||||| |||||||| | | Sbjct 2877550 GGTCGTATTGCTGGCTTGGAAGTTCTTCGCATAATCAATGAACCCACTGCTGCGTCCTTG 2877609 Query 550520 GCATATGGACTTGATAA 550536 || |||||| |||| || Sbjct 2877610 GCTTATGGATTTGAGAA 2877626 >seq652 Length=2384379 Score = 102 bits (112), Expect = 7e-16 Identities = 158/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 |||||||||||| || | || ||||| ||| || ||| || |||||||| | ||| Sbjct 464595 CCTGAGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAAAGT 464536 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | | ||| ||||| || || || ||||| ||||| || ||||| || || || ||||| Sbjct 464535 GCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGGATTCC 464476 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCG 563430 ||| || ||||| || || || || |||| ||| || || | || || Sbjct 464475 TTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAACTGTGTC--TGAACTTTCAACCTCA 464418 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || |||||||| ||||| |||||||||||||| Sbjct 464417 AGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTGCAT 464374 Score = 98.7 bits (108), Expect = 8e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || || ||||| || | ||| || ||| ||||||||||| |||||||| ||||| ||| Sbjct 465239 ATGTTATAATCCGCCAAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTT 465180 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 |||||||| || ||||| ||||| || || |||||||| ||| || ||||| || Sbjct 465179 TGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTG 465120 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 |||| | | ||| | || | || || ||||| || || || || || |||||| Sbjct 465119 TCAGAGCTCTCAACTTCCAAGGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTGC 465060 Query 563473 AT 563474 || Sbjct 465059 AT 465058 >seq24 Length=10012559 Score = 91.5 bits (100), Expect = 1e-12 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 550392 TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTA 550451 ||| | |||| || | || || || || || ||||||||||| || || || || || | Sbjct 6147325 TTAAGAATGCGGTCGTCACCGTCCCTGCCTACTTTAATGACTCTCAGCGGCAGGCCACCA 6147266 Query 550452 AAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTG 550511 | |||||||| || ||||| || ||||| | ||||| || ||||| |||||||||| Sbjct 6147265 AGGATGCTGGTGTCATCGCTGGCCTCAATGTCATGCGTATCATAAATGAGCCTACTGCTG 6147206 Query 550512 CTGCACTTGCATATGGACTTGATAA 550536 | || |||| ||||| || || || Sbjct 6147205 CGGCCATTGCTTATGGTCTCGACAA 6147181 >seq46 Length=3638525 Score = 86.0 bits (94), Expect = 5e-11 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 |||| || || || || | || | |||||||| || || ||||| ||||||||||| Sbjct 2089918 CAGCCTACTTCAACGATGCCCAGAGGCAAGCTACCAAGGACGCTGGTGTTATTGCTGGAC 2089977 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 | |||||| | | |||||||||||||| ||||||||||| |||| || || |||| Sbjct 2089978 TCAATGTTGCTAGAATTATCAATGAACCCACTGCTGCTGCCATTGCGTACGG-CTTG 2090033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027372273064240