Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq203 134 1e-26
seq49 134 1e-26
seq116 120 2e-22
seq652 114 1e-20
seq91 96.9 3e-15
>seq203
Length=8626763
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || | ||| | || || || |||||||| || || || || || ||||||||
Sbjct 5730156 CCTCCCCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 5730097
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||| | |||| || | ||||| || ||||| || | | ||| || || || ||
Sbjct 5730096 AAGGTTCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 5730037
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || |||||||||||| ||||||| | || | ||||| || |||||||
Sbjct 5730036 ATCCCTTCCTTGTCTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCACC 5729977
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| || ||||| || | ||||| ||||| || |||||
Sbjct 5729976 TCAAGGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCAT 5729930
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || ||||| | || || || || ||||| ||||| || || || || || ||
Sbjct 5730612 CCACCCCTCAAACGGAGCACCAAGTGGAGAGTAGACTCTTTCTGGATGTTATAGTCTGCA 5730553
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| ||| |||| || | ||||| || || || || | | ||| || || || |||
Sbjct 5730552 AGAGTCCTGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGGGGA 5730493
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || ||||||||||| || ||| | || | ||||| || ||||||||
Sbjct 5730492 ATACCCTCCTTGTCTTGAATTTTCGCCTTAACATTGTCAATGGTGTCCGAGCTTTCCACT 5730433
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||| | || || ||||| | || || || || ||||||||
Sbjct 5730432 TCCAAAGTTATGGTCTTCCCGGTAAGCGTCTTCACGAAAATCTGCAT 5730386
>seq49
Length=4798478
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || | ||| | ||| || ||||| || || ||||| || || || ||||| ||
Sbjct 2870140 CCTCCCCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCC 2870081
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| || |||| || | || || || ||||| || | | ||| ||||| || |||
Sbjct 2870080 AGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2870021
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| || ||||||||| ||| ||| | || | ||||||||| | || |||
Sbjct 2870020 ATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTCTCAACT 2869961
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| ||||| || || | || || ||||| || |||||
Sbjct 2869960 TCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCAT 2869914
Score = 131 bits (144), Expect = 1e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || || || ||||| || ||||| ||||| | || | | |||| || | |||
Sbjct 2870345 ATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCCAGTGTCCGGCCATCCTCAAGTTG 2870286
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| ||||| |||||||| ||||| || || || ||||||||||| ||||| || || ||
Sbjct 2870285 CTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGGAATGCCTTCCTTATCCTGTATCTT 2870226
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | |||||||| | |||||||| | |||| || ||||||||
Sbjct 2870225 CGACTTGACATTATCGATCGTGTCAGAGCTCTCCACTTCCAAGGTGATAGTCTTGCCGGT 2870166
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| || || ||||| |||||||||
Sbjct 2870165 AAGGGTCTTCACAAAAATCTGCATG 2870141
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || || || ||||| |||||||||||||| | || | | |||| || | ||
Sbjct 2841289 ATGGAGCGTCGACTCCTTTTGAATATTGTAATCGGCCAGTGTCCGGCCATCCTCGAGCTG 2841230
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| |||||||| ||||| ||||| || || || ||||||||||| || || || || ||
Sbjct 2841229 TTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGTATCTT 2841170
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | ||||| || | || ||||| | ||||| || ||||| ||
Sbjct 2841169 CGCTTTGACATTATCAATCGTGTCCGAGCTCTCGACTTCCAAAGTGATAGTCTTGCCAGT 2841110
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| ||| || ||||| |||||||||
Sbjct 2841109 CAGAGTCTTCACAAAAATCTGCATG 2841085
Score = 123 bits (136), Expect = 2e-23
Identities = 166/230 (72%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||||||||| | ||| | || || |||||||||||||| ||||| || ||||| || |
Sbjct 2846846 TTCCTCCTCTGAGACGGAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCCG 2846787
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
||| || ||| |||| || | ||||| | ||||| ||||| ||||| || || || |
Sbjct 2846786 CGAGCGTCCTGCCATCCTCGAGCTGCTTGGCAGCAAAGATCAACCGCTGCTGGTCTGGGG 2846727
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| || |||||||| || || ||||| || ||| | || | || | || | || |
Sbjct 2846726 GGATCCCTTCTTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGTAGCGGAACTCTCGA 2846667
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
| || ||||| | || ||||| || | || || ||||| |||||||||
Sbjct 2846666 C-TCCAGAGTAATTGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 2846618
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || | || | ||| || ||||| || || ||||| || || |||||||| ||
Sbjct 2841084 CCTCCCCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCCGCC 2841025
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| || |||| || | || || || ||||| || | | ||| ||||| || |||
Sbjct 2841024 AAAGTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2840965
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || |||||||| ||| || | || | |||||||| | || |||
Sbjct 2840964 ATGCCTTCCTTGTCCTGAATTTTCGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACT 2840905
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| ||||| || || | || || ||||| || |||||
Sbjct 2840904 TCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCAT 2840858
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || ||||||||||| ||||| ||||| || |||||||| ||
Sbjct 2846206 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 2846147
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| || ||||| || | | ||| || || || ||
Sbjct 2846146 AGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 2846087
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || ||||| |||||||| || || ||| | || | ||||| || |||| ||
Sbjct 2846086 ATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACC 2846027
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || || | || |||||||| | || || ||||| |||||||||
Sbjct 2846026 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2845979
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| || ||||| || || || || || || |||||||| || | ||| || |||| ||
Sbjct 2847055 AACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCTACCATCTTC 2846996
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| || || || ||||| || | | ||| ||||| || ||||||||||| || || ||
Sbjct 2846995 TAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTG 2846936
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||||| ||| || | || | |||||||| | || ||||| | ||||| |||||
Sbjct 2846935 AATTTTTGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACTTCCAAAGTGATTGTTTT 2846876
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| || |||||
Sbjct 2846875 CCCAGTAAGGGTCTTCACAAAAATTTGCAT 2846846
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || || || ||||| || ||||||||||| | || | | |||| | | |||
Sbjct 2847277 ATGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCCAGTGTCCGGCCATCCCCGAGTTG 2847218
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| |||||||| ||||| ||||| || || || |||||||| || || || || || ||
Sbjct 2847217 CTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGTATCTT 2847158
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | ||||| || | || ||||| | |||| || ||||| ||
Sbjct 2847157 CGCTTTGACATTATCAATCGTGTCCGAGCTCTCAACTTCCAAGGTGATAGTCTTGCCAGT 2847098
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| ||| || ||||| | |||||||
Sbjct 2847097 CAGAGTCTTCACAAAAACCTGCATG 2847073
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || ||||| ||||| ||||| || || || || ||||| ||
Sbjct 2840628 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 2840569
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| |||||||| || | | ||| || || || ||
Sbjct 2840568 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2840509
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||||||||| || || ||| | || | |||||||| |||| ||
Sbjct 2840508 ATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTATCAATCGTGTCAGAGCTTTCAACC 2840449
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || || | || |||||||| | || || ||||| |||||||||
Sbjct 2840448 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2840401
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || ||||| ||||| ||| | || || || || ||||| ||
Sbjct 2846617 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATCCCTTCTGGATGTTATAATCAGCC 2846558
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| | |||||| || | | ||| || || || ||
Sbjct 2846557 AGGGTGCGACCATCCTCGAGCTGCTTGCTTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2846498
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||||||||| || || ||| | || | ||||| || |||| ||
Sbjct 2846497 ATTCCCTCCTTATCTTGAATCTTGGCCTTAACATTATCGATCGTGTCGGAGCTTTCAACC 2846438
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || || | || |||||||| | || || ||||| |||||||||
Sbjct 2846437 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2846390
>seq116
Length=10441785
Score = 120 bits (132), Expect = 2e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || ||||| || || ||||||||||||| |||||| | || || | |||
Sbjct 4726719 TGGAGCGTCGACTCTTTCTGGATGTTGTAATCGGCGAGGGTTCTGCCGTCCTCGAGCTGC 4726660
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| |||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 4726659 TTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTGGATTTTG 4726600
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | || || || || |||| || |||||||||
Sbjct 4726599 GCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGCGTGATGGTCTTGCCGGTT 4726540
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| || || || || |||||||||
Sbjct 4726539 AGGGTCTTGACGAAGATCTGCATG 4726516
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || || || || || ||||||||||||| || ||| | || || | |||
Sbjct 4711868 TGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTCCTGCCGTCCTCGAGCTGC 4711927
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| |||||| ||||| ||||| ||||| || || || || || ||
Sbjct 4711928 TTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTG 4711987
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | || || || || |||| |||||||||||
Sbjct 4711988 GCCTTGACGTTATCGATCGTGTCCGAGCTCTCGACCTCGAGCGTGATGGTTTTGCCGGTC 4712047
Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481
| || || || || ||||||||| | |||| ||
Sbjct 4712048 AGGGTCTTGACGAAGATCTGCATGCCTCCGCGGAG 4712082
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || || || || || ||||||||||||| || ||| | || || | |||
Sbjct 4712096 TGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTCCTGCCGTCCTCGAGCTGC 4712155
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| |||||| |||||||| || ||||| || || || || || ||
Sbjct 4712156 TTTCCGGCGAAGATCAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTA 4712215
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | ||||| || || |||| || ||||||||
Sbjct 4712216 GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAGCGTGATGGTCTTGCCGGTC 4712275
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| || || || || |||||||||
Sbjct 4712276 AGGGTCTTGACGAAGATCTGCATG 4712299
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| |||||||| || || || |||||||||||||||| || | | || |||| |||
Sbjct 4711640 TGCAGGGTAGACTCCTTCTGGATATTGTAATCGGCGAGGGTGCGACCGTCCTCCAGCTGC 4711699
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || || | ||||| ||||| ||||| || || || || || || || ||
Sbjct 4711700 TTCCCGGCGAAGATGAGCCGCTGCTGATCCGGCGGGATCCCCTCCTTGTCCTGTATCTTC 4711759
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | ||||| || || |||| ||| || |||||
Sbjct 4711760 GCCTTCACATTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTGATCGTCTTCCCGGTC 4711819
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || ||||||||
Sbjct 4711820 AGGGTCTTCACGAAGATCTGCAT 4711842
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || || || || |||||||||||||||| || || | || || | |||
Sbjct 4726491 TGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGGGTCCTACCGTCCTCGAGCTGC 4726432
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| |||||| ||||| ||||| ||||| || || || || |||||
Sbjct 4726431 TTTCCAGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATTTTG 4726372
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| || | || || || || |||| || || |||||
Sbjct 4726371 GCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGCGTGATGGTCTTCCCGGTC 4726312
Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481
| || || || || ||||||||| | |||| ||
Sbjct 4726311 AGGGTCTTGACGAAGATCTGCATGCCTCCGCGGAG 4726277
>seq652
Length=2384379
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || || ||||| || ||||| || || |||||||| || ||
Sbjct 464828 CCACCTCTGAGACGAAGCACCAAGTGAAGTGTTGATTCCTTCTGGATATTGTAGTCTGCC 464769
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || || |||| || | ||||| ||||| || ||||| | || ||||| || |||
Sbjct 464768 AGGGTCCTACCATCCTCAAGCTGCTTGCCTGCGAAAATCAACCTTTGCTGATCTGGGGGA 464709
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || || || || ||||| |||||| | || | ||||| || |||| ||
Sbjct 464708 ATTCCCTCCTTGTCCTGGATTTTCGCCTTTACATTATCGATGGTGTCCGAACTTTCAACC 464649
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || || | || ||||| || | || || |||||||||||||||
Sbjct 464648 TCTAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAATATCTGCATG 464601
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || || || ||||| || |||||||| || | || | | |||| || | ||
Sbjct 465489 ATGTAGAGTTGACTCCTTTTGGATGTTGTAATCCGCCAGTGTCCGGCCATCCTCGAGCTG 465430
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| ||||| | ||| ||||| || ||||||||||| || || || || ||
Sbjct 465429 CTTCCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGTATCTT 465370
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || || || || || | || ||||| | ||| | || || |||||
Sbjct 465369 AGCTTTGACATTATCAACGGTATCCGAGCTCTCGACTTCCAAAGTTATGGTCTTCCCGGT 465310
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| || || |||||||||||||||
Sbjct 465309 AAGGGTCTTGACAAATATCTGCATG 465285
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || || || | || || ||||| || || || || || || || ||||| ||
Sbjct 465284 CCCCCCCTCAATCGCAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCC 465225
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| || |||| || | ||| || || ||||| || | | || ||||| || |||
Sbjct 465224 AAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGA 465165
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || |||||||| ||| ||| | || | |||||||| | || |||
Sbjct 465164 ATGCCTTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 465105
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||| ||| || || |||| || || ||||| || |||||
Sbjct 465104 TCCAAGGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTGCAT 465058
>seq91
Length=4251426
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
||||||| || | | || || | |||||| || || || ||||| || || || || |
Sbjct 285773 TTCCTCCCCTGAGCCTCAACACCAGATGAAGAGTCGACTCCTTTTGGATGTTATAGTCTG 285832
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||||| |||| |||||||||||||| ||||| ||||| |||||||| || || |
Sbjct 285833 CAAGAGTTCGTCCATCTTCCAATTGCTTACCAGCAAAAATCAATCGCTGTTGGTCCGGAG 285892
Query 101361 GAATGCCTTCTTTATC 101376
|||| ||||| || ||
Sbjct 285893 GAATACCTTCCTTGTC 285908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396102716906232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |