Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq444 518 4e-142
seq10427 511 5e-140
seq32303 361 6e-95
seq31551 223 4e-53
seq31730 197 2e-45
seq231 188 8e-43
seq328 176 5e-39
seq111 176 5e-39
seq31523 147 2e-30
seq85 122 1e-22
seq203 111 2e-19
seq155 107 2e-18
seq31544 104 3e-17
>seq444
Length=4271
Score = 518 bits (574), Expect = 4e-142
Identities = 713/994 (72%), Gaps = 2/994 (0%)
Strand=Plus/Minus
Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951
||||| | ||| ||||| || | ||||| || || | || ||||| || || ||
Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055
Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGTTTC-ATCGTCGCCTTCGTCGCTGCTCC 163010
||||| || || | ||| | |||||| ||||||| || |||| ||| | ||||||||
Sbjct 1054 ATGATCCCTACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCC 996
Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070
|| || || ||||| || || ||||| || || |||| || || | || || |||||
Sbjct 995 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 936
Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130
|| || || ||||| || |||| |||| || ||||| | || || || || ||
Sbjct 935 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAAT 876
Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 163190
||||||||| ||||| ||||||| ||||| || ||||| ||||||| |||| | ||
Sbjct 875 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGT 816
Query 163191 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCG 163250
| ||||| | | || | | |||||||| ||||| ||||||||| | ||
Sbjct 815 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 756
Query 163251 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 163310
| |||||||| || ||||| ||| ||||| || || ||||||||||| || | ||
Sbjct 755 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 696
Query 163311 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 163370
|| ||| || ||||||| | ||||| || ||| ||||| | ||||| || || ||
Sbjct 695 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 636
Query 163371 CTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 163430
|||||| || ||||||| ||| |||| ||||| || ||||||||||| || ||||||||
Sbjct 635 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 576
Query 163431 CTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGG 163490
|| || ||||| || || |||||||| ||||| || || || || || ||||||||
Sbjct 575 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 516
Query 163491 CAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGG 163550
| || || ||| | || | || || || |||| ||| || || | ||
Sbjct 515 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 456
Query 163551 TTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 163610
||||| || || ||||||||||| || |||||||| || || || || || || || ||
Sbjct 455 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 396
Query 163611 TCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGC 163670
|| ||||| ||||||||||| |||||||| | | | || |||||| | ||
Sbjct 395 CCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 336
Query 163671 AGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAA 163730
|| ||||| || || || || ||||||||||| | || | || || ||||| |||||
Sbjct 335 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 276
Query 163731 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACAC 163790
||| || |||||||| |||||||| || | ||||| |||| || ||||| | || ||
Sbjct 275 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 216
Query 163791 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 163850
|||||| || | ||||||| ||| || |||||||||||||||||||| ||||| ||
Sbjct 215 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 156
Query 163851 ACACAACTTCCCACTCGATCTTGCTGCTGCTGAG 163884
||||||||||| || || || ||||||| ||||
Sbjct 155 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 122
>seq10427
Length=4047
Score = 511 bits (566), Expect = 5e-140
Identities = 719/1007 (71%), Gaps = 2/1007 (0%)
Strand=Plus/Plus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || ||||| |||||||| || |||||||| || | || ||
Sbjct 788 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 847
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 848 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 907
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| || ||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 908 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 967
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || |||||| || | | | |||||| | | |||| ||||||||||| | ||
Sbjct 968 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 1027
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
|| |||| || ||||| ||| | || || |||||| ||| || |||||||||||
Sbjct 1028 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 1087
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| ||||| |||| ||||| ||| | || || ||||| || || || ||| | | |
Sbjct 1088 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 1146
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||||||||
Sbjct 1147 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 1206
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || ||||| ||||| || ||||||| || || || ||||| || || || ||
Sbjct 1207 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 1266
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||| ||||| | | || | ||||| || || || ||||| | ||||| || |||||
Sbjct 1267 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 1326
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| || || ||| | |||| | || |||||| ||||||||||| | || ||
Sbjct 1327 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 1386
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
|||||||| |||| || ||||| || |||||||| || || ||| | | ||
Sbjct 1387 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 1446
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| ||
Sbjct 1447 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 1506
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||
Sbjct 1507 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 1566
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| || |||| | | ||| | ||| | ||||| ||||| || || ||
Sbjct 1567 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTAGCTTTGAACCTACGTGCCTATGACTT 1626
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
||| ||||| ||| | ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 1627 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 1686
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| || || || ||||| | ||||||||| |||| || ||||| || ||||||||
Sbjct 1687 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 1746
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 1747 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 1793
>seq32303
Length=834
Score = 361 bits (400), Expect = 6e-95
Identities = 516/721 (72%), Gaps = 4/721 (1%)
Strand=Plus/Minus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | |||| || || |||||||| || ||||| || || | || ||
Sbjct 724 GATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 665
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | ||| | || |||||| | || || ||| | ||||| || |||
Sbjct 664 CCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 605
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTCACAGCAGCTGT 164797
|| |||||||| | || ||||||| | ||||| ||| ||||| | || || || ||
Sbjct 604 TATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGC-AACTTCTTAACTGCCGCAGT 546
Query 164798 CTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCA 164857
|| || |||||| || | | | |||||| | | |||| ||||||||||| | ||
Sbjct 545 TTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACA 486
Query 164858 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGG 164917
|| |||| || ||||||||| | || || || |||| ||| ||||||||||||||
Sbjct 485 AGGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGTGGCTCTCCACGG 426
Query 164918 TGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTA 164976
|| |||| ||||| ||||||||| | || || ||||| || || || ||| | |
Sbjct 425 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT- 367
Query 164977 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCC 165036
| || ||||| ||||| || || || |||||||| |||||||||||||| || ||||
Sbjct 366 TGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCC 307
Query 165037 TTATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAA 165096
| || || ||||| |||||||| ||||||| || || || ||||| || ||||| |
Sbjct 306 TGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTA 247
Query 165097 TCTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATA 165156
| ||| | ||| | | || | ||||| || || || ||||| | ||||| || ||||
Sbjct 246 TATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 187
Query 165157 TGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAG 165216
||||||| ||||| ||| | ||||| | || | |||| ||||||||||| | || |
Sbjct 186 TGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTCATGGTGCTACCG 127
Query 165217 TTGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGA 165276
| |||||||| |||| || ||||| || |||||||| || || ||| | | |
Sbjct 126 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAA 67
Query 165277 CACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCG 165336
| || | ||||| |||||||| |||||||| || || ||||| ||||| || ||||| |
Sbjct 66 CTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTG 7
Query 165337 G 165337
|
Sbjct 6 G 6
>seq31551
Length=1713
Score = 223 bits (246), Expect = 4e-53
Identities = 315/439 (72%), Gaps = 9/439 (2%)
Strand=Plus/Minus
Query 163453 GGTGT-CTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACT 163511
||||| |||||| || || || ||| || |||||||| | || |||||| |
Sbjct 1156 GGTGTACTTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 1097
Query 163512 CGTCCGTGAGACGACTGAAACTGAGTCA-CAAAACTATGGTTACAAGTTTGGTCAAGAAG 163570
|| | || || || |||| ||| || | || || ||||||| || ||||||||||
Sbjct 1096 GATCAGGGAAACCACAGAAAATGAATCTGCTAATGTA-GGTTACAGATTCGGTCAAGAAG 1038
Query 163571 AAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATG 163630
|||| || || || ||||| || || ||||| || || || || ||||||||||||||||
Sbjct 1037 AAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATG 978
Query 163631 CATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAA 163690
| ||||||| | | || |||||||| || || |||||||| || || |
Sbjct 977 CTAGTGTCAACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTA 918
Query 163691 TCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCA 163750
||||||| ||||| | || | ||||||||||| || || | ||||||||||| ||||
Sbjct 917 TCTGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAATTTCA 858
Query 163751 ACCAGTCCATCCTTGATGGTC------AGGGTCGTGTGCTCAACACTTGGGCAGACGTGC 163804
|||| || | ||||| ||| | |||| ||| | || || ||||| || |
Sbjct 857 ACCAATCTGTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGATCTCA 798
Query 163805 TTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 163864
||||||| ||| || |||||||||||||||||||| ||||| || || |||||||| |
Sbjct 797 TTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCCC 738
Query 163865 TCGATCTTGCTGCTGCTGA 163883
| || || ||||||| |||
Sbjct 737 TAGACCTAGCTGCTGTTGA 719
>seq31730
Length=297
Score = 197 bits (218), Expect = 2e-45
Identities = 205/269 (76%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 163222 ATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCA 163281
||||| ||||| ||||||||| | || | ||||||||||| ||||| ||| |||
Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCA 60
Query 163282 TACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGT 163341
|| || || ||||||||||| || | || || ||| || |||| || | ||||||||
Sbjct 61 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGA 120
Query 163342 TCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGTCTTC 163401
||| ||||| | ||||| || || || ||||| || ||||||| |||| |||| |||
Sbjct 121 AGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTC 180
Query 163402 CAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGTCTTC 163461
|| || |||||||||||||| |||||||| || || ||||| || || |||||||| |||
Sbjct 181 CAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTC 240
Query 163462 GGTGGATCACTCTTCTCGGCAATGCATGG 163490
|| || || || ||| || ||||||||
Sbjct 241 GGCGGCTCCCTATTCAGTGCTATGCATGG 269
>seq231
Length=1485859
Score = 188 bits (208), Expect = 8e-43
Identities = 223/302 (74%), Gaps = 0/302 (0%)
Strand=Plus/Minus
Query 165285 GAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCG 165344
||||| || ||||| |||||||| || || ||||| ||||| || ||||| || ||||
Sbjct 476701 GAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 476642
Query 165345 TTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGG 165404
||||| || || | ||| | ||||| || ||||| ||||| || || | ||| | |||
Sbjct 476641 TTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACCGGTTTATGG 476582
Query 165405 ACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGT 165464
| || |||| | | ||||| ||| | ||||| ||||| || | ||||| |
Sbjct 476581 ATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAACTTCGTTTGC 476522
Query 165465 CAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTA 165524
||||||||| | |||||||||||||| |||||||| || ||||||| |||||| || ||
Sbjct 476521 CAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAAAATATTCTC 476462
Query 165525 TTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTTATC 165584
|| || ||| | | |||||| | |||| || |||||||| ||||||||| ||||
Sbjct 476461 TTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAAAACCTTATA 476402
Query 165585 TT 165586
||
Sbjct 476401 TT 476400
>seq328
Length=921196
Score = 176 bits (194), Expect = 5e-39
Identities = 205/277 (74%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 165305 CACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCT 165364
||| || || ||||| ||||| || ||||| || |||| ||||| || || || ||| |
Sbjct 671670 CACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTT 671611
Query 165365 TCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTAT 165424
||||| || ||||| ||||| || || | ||| | |||| || |||| | |
Sbjct 671610 ACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 671551
Query 165425 TGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGA 165484
||||| ||||| ||||| ||||| || || ||||| ||||||||| | ||||| ||
Sbjct 671550 CGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGA 671491
Query 165485 AGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGTGC 165544
|||||| |||||||| || |||||||||||||| || || || || |||| | |||||
Sbjct 671490 AGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGC 671431
Query 165545 TTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTT 165581
|||| |||| || ||||| || ||||||||| ||
Sbjct 671430 TTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTT 671394
>seq111
Length=3019079
Score = 176 bits (194), Expect = 5e-39
Identities = 210/285 (74%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 165340 TTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTC 165399
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | |||
Sbjct 6799 TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 6740
Query 165400 TTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCG 165459
| |||| || |||| | | ||||| ||||| ||||| ||||| || || ||||
Sbjct 6739 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCG 6680
Query 165460 TGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACA 165519
| ||||||||| | ||||| |||||||| |||||||| || |||||||||||||| |
Sbjct 6679 TTTCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATA 6620
Query 165520 TCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACT 165579
| || || || ||||| | ||||||||| |||| || ||||| || |||||||||
Sbjct 6619 TTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 6560
Query 165580 TTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
|||| ||||| || || || | || | || ||| | |||||||
Sbjct 6559 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACCCTCTTTAAT 6515
>seq31523
Length=225
Score = 147 bits (162), Expect = 2e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 163549 GGTTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTC 163608
||||||| || |||||||| ||||| || || || ||||| || || ||||| || ||
Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84
Query 163609 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTG 163668
|| || ||||||||||||||||| |||||||| | | | |||||||||||
Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144
Query 163669 GCAGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTC 163728
|| || |||||||| || || |||||||| ||||| | || | ||||| ||||| |||
Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTC 204
Query 163729 AACCTCAACGGTTTCAACTTC 163749
||||| || |||||||| |||
Sbjct 205 AACCTAAATGGTTTCAATTTC 225
>seq85
Length=5226098
Score = 122 bits (134), Expect = 1e-22
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 163714 AGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 163773
||||| ||||| |||||||| || |||||||| |||||||| ||| | ||||| ||||
Sbjct 1123347 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAA 1123288
Query 163774 GGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTT 163833
|||||||| | || || |||| || | |||| | ||| || ||||||||||||
Sbjct 1123287 GGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATGGAAGTT 1123228
Query 163834 ATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGCT 163878
|||||||| |||| || || |||||||| || || || ||| ||
Sbjct 1123227 ATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGCTACT 1123183
>seq203
Length=8626763
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 163219 TATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGTA 163278
|| ||||| ||| | ||||||| | || ||||||||||||| ||||| |||
Sbjct 3756518 TACATGGGTTATGAGTAGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTT 3756459
Query 163279 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 163338
||||| || || || |||||| | || | || || ||| || |||| || | ||||||
Sbjct 3756458 GCATATTCAGCTCCGGTTGCAACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 3756399
Query 163339 GGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGTC 163398
|| || | ||| | ||||| || || || || | | ||||| | |||| ||||
Sbjct 3756398 GGAAGATTTTATGATGATATGCCTCTAGGAATTTCCAGTGCTTTCAATTTCATGATTGTA 3756339
Query 163399 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCAT 163437
|||||||| |||||||||||||| ||| | || || |||
Sbjct 3756338 TTCCAAGCTGAGCACAACATCCTTATGTATCCATTGCAT 3756300
>seq155
Length=2184526
Score = 107 bits (118), Expect = 2e-18
Identities = 307/463 (66%), Gaps = 17/463 (4%)
Strand=Plus/Minus
Query 164703 GGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCC 164762
|||||||| || || ||| | ||||| || |||| || |||| | ||| ||||
Sbjct 253041 GGTTGGCTCACAGGTACAACCTTTGTAACTTCACGGTATACTCATGAATTGGCTAGTTCC 252982
Query 164763 TATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTCTCGACGCCTGCTGATGCTATGGGT 164822
||| | || || |||||| | || || || || | || |||| | || | | |
Sbjct 252981 TATTTGGACGGATGTAACTTCTTAACCGCCGCAGTTTTTACTCCTGTTAATAGTTTAGCA 252922
Query 164823 CATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGG-GAATTTCCAGCGGTGGTGCCA 164881
||| || | | |||| |||| || ||| | || || || ||| | | || ||
Sbjct 252921 CATCCTTTGTTGTTACTATGGGATCTTGATGCACAAGGAGATTTTAC-----TCATGTCA 252867
Query 164882 ACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGTTTCAT 164941
| | || | | |||| ||| ||||||||||| || || || ||||| ||||||||
Sbjct 252866 ATTAGGCGATCCGTGGACTTTTGTGGCTCTCCATGGCGCTTTTAAACTAATAGGTTTCAT 252807
Query 164942 GCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTATCCGTCCTTACAATGCTATTGCGT 165000
| | || || ||||| || || | ||| | | | || ||||| ||||| || | |
Sbjct 252806 G-TACGTCAATTTGAACTTGCTCAATCTGTTCAAT-TGCGACCTTATAATGCAATCACAT 252749
Query 165001 TCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTGGGTCAGTCCA 165060
||| |||||| |||| ||||||||| | || || || || || ||||||||||
Sbjct 252748 TCTATGGTCCAATTGTTGTTTTTGTACTC----TCA--ATTTATCCGCTAGGTCAGTCCA 252695
Query 165061 GTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTT- 165119
||||||| || || || ||||| | ||||| || ||| | || | | ||| ||
Sbjct 252694 GTTGGTTCTTTGCACCTAATTTTGGTATAGCAGCTATATTTTGCTTTATCAT-TTCTTTC 252636
Query 165120 CAAGGATTCCACAACTGGACCCTCAACCCCTTCCATATGATGG 165162
||||| || || | |||| | ||||| || || |||||||
Sbjct 252635 CAAGGGTTTCATTATCGGACATTGAACCCATTTCAAATGATGG 252593
>seq31544
Length=164
Score = 104 bits (114), Expect = 3e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 163752 CCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCG 163811
||| ||| | ||||| |||| |||||||| | || || ||||| || | |||| ||
Sbjct 1 CCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 60
Query 163812 CGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCT 163871
||| ||| |||||||||||||||||||| ||||| || || |||||||| || || ||
Sbjct 61 TGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 120
Query 163872 TGCTGCTGCTGA 163883
||||||| |||
Sbjct 121 AGCTGCTGTTGA 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562953508594880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |