Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_019711.1
Length=47288
Score E
Sequences producing significant alignments: (Bits) Value
seq22652 183 9e-42
seq21163 183 9e-42
seq13007 183 9e-42
>seq22652
Length=101
Score = 183 bits (202), Expect = 9e-42
Identities = 101/101 (100%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 22943 AGCTTGGCTGTATAGTCAACTAACTCTTCTGTCGAAGTGATATTTTTAGGCTTATCTACC 23002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101 AGCTTGGCTGTATAGTCAACTAACTCTTCTGTCGAAGTGATATTTTTAGGCTTATCTACC 42
Query 23003 AGTTTTAGACGCTCTTTAATATCTTCAGGAATTATTTTATT 23043
|||||||||||||||||||||||||||||||||||||||||
Sbjct 41 AGTTTTAGACGCTCTTTAATATCTTCAGGAATTATTTTATT 1
>seq21163
Length=101
Score = 183 bits (202), Expect = 9e-42
Identities = 101/101 (100%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 27195 GTGTGGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACTGCTATCTT 27254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGTGGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACTGCTATCTT 60
Query 27255 CTTACTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 27295
|||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CTTACTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 101
>seq13007
Length=101
Score = 183 bits (202), Expect = 9e-42
Identities = 101/101 (100%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 24970 AGCTTTTCTAATTTAACCTTTGTCAGGTTACCAACTACTAAGGTTGTAGGCTCAAGAGGG 25029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGCTTTTCTAATTTAACCTTTGTCAGGTTACCAACTACTAAGGTTGTAGGCTCAAGAGGG 60
Query 25030 TGTGTCCTGTCGTAGGTAAATAACTGACCTGTCGAGCTTAA 25070
|||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGTGTCCTGTCGTAGGTAAATAACTGACCTGTCGAGCTTAA 101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151134686892000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |