Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq161 116 2e-20
seq49 114 8e-20
seq203 113 3e-19
seq116 111 1e-18
seq652 109 4e-18
seq91 100 2e-15
seq24 95.1 8e-14
seq18 87.8 1e-11
seq809 86.0 4e-11
>seq161
Length=5110746
Score = 116 bits (128), Expect = 2e-20
Identities = 141/187 (75%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 474680 GTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATG 474737
||| || | || |||||| |||| || ||| | || ||||| |||| |||| | | |
Sbjct 4994064 GTTCTAACAAAGATGAAAGAAACGGCTGAGG-CTTA-CTTGGGGAAGACAGTATCAAAAG 4994007
Query 474738 CAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGG 474797
| || ||||| |||||||| || || |||||| | || | || ||||| |||||||| |
Sbjct 4994006 CTGTGATTACGGTTCCAGCTTACTTCAATGATGCCCAGAGACAGGCAACCAAAGATGCTG 4993947
Query 474798 GAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTG 474857
| ||||||||||||||| | || | || |||||||| ||||| ||||| ||||||
Sbjct 4993946 GCAGAATTGCAGGTCTTGACGTGCAGAGAATCATTAATGAGCCAACTGCAGCTGCACTTT 4993887
Query 474858 CTTATGG 474864
|||||||
Sbjct 4993886 CTTATGG 4993880
Score = 100 bits (110), Expect = 2e-15
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887
||||| | | || |||||| ||||| ||||| || ||||| || ||||||||||||
Sbjct 4993880 CCATAAGAAAGTGCAGCTGCAGTTGGCTCATTAATGATTCTCTGCACGTCAAGACCTGCA 4993939
Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947
||| | | | |||| |||||||| | || |||||||| || ||||| || || |||
Sbjct 4993940 ATTCTGCCAGCATCTTTGGTTGCCTGTCTCTGGGCATCATTGAAGTAAGCTGGAACCGTA 4993999
Query 290948 ATAACAGCTTTTTCCACTTTCTTTTTCAAATAATTTTCTGCCATTTGTTTTAT 291000
|| ||||||||| ||| |||| ||| ||| || ||| ||| ||| ||
Sbjct 4994000 ATCACAGCTTTTGATACTGTCTTCCCCAAGTAAGCCTCAGCCGTTTCTTTCAT 4994052
>seq49
Length=4798478
Score = 114 bits (126), Expect = 8e-20
Identities = 133/177 (75%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|||||||| || ||||| || |||||| || || || |||||||||||||| | ||
Sbjct 2870092 TTATAATCTGCCAGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGC 2870033
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
||||| || ||||| ||||| ||||| ||||| ||| ||||||| || ||||| |||
Sbjct 2870032 TGATCCGGGGGAATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCA 2869973
Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || || ||| || || ||||| || || || ||||| || || |||||
Sbjct 2869972 GAGCTCTCAACTTCCAA-AGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTG 2869917
Score = 105 bits (116), Expect = 4e-17
Identities = 131/177 (74%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || | ||| || |||||| || || || |||||||||||||| | ||
Sbjct 2847024 TTGTAATCCGCCAAAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGC 2846965
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
||||| || ||||| ||||||||||| ||||| ||| |||||| || || || |||
Sbjct 2846964 TGATCCGGGGGAATGCCTTCCTTGTCCTGAATTTTTGCTTTGACGTTGTCGATGGTGTCA 2846905
Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || || ||| || || ||||| || || || ||||| || ||||||||
Sbjct 2846904 GAGCTCTCAACTTCCAA-AGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTG 2846849
Score = 104 bits (114), Expect = 2e-16
Identities = 160/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608
||| |||||||| |||||||| || || ||| |||| ||| ||| ||||| || ||
Sbjct 2841307 ACGCAGACGGAGGACAAGATGGAGCGTCGACTC-CTTTTGAAT-ATTGTAATCGGCCAGT 2841250
Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668
|| | | ||| || || || || || |||||||| | || || || || || |||||
Sbjct 2841249 GTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGAATG 2841190
Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727
||||||||||| || ||||| ||||||| ||||| || || | | | | | || |
Sbjct 2841189 CCTTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCGACTTCC 2841130
Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| || || || |||||||| || ||||| ||
Sbjct 2841129 AA-AGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTG 2841089
Score = 102 bits (112), Expect = 5e-16
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| |||||||| || || | ||| || || ||||| |||||||| || || | ||
Sbjct 2869636 TTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGC 2869577
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| |||||||| ||||| ||||||||||||||||| |||||| |||| || ||
Sbjct 2869576 TGGTCAGGAGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAACCGTGTCC 2869517
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | ||||||||||| || || |||||||| ||||| || || || ||
Sbjct 2869516 GAGCTTTCAACCTCAAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2869461
Score = 100 bits (110), Expect = 2e-15
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614
||||| || || | |||||| || ||| || | || |||||||| || || |
Sbjct 2846197 AGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCCAGGGTGCGC 2846138
Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674
||| || || ||||| |||||||| || || | || || |||||||| ||||| ||
Sbjct 2846137 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCT 2846078
Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734
|||||||||||||| |||||| ||||| || || | | | | || ||||||
Sbjct 2846077 TTGTCTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACCTCGAGGGTA 2846018
Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || |||||||| ||||| || || || ||
Sbjct 2846017 ATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2845983
Score = 96.9 bits (106), Expect = 2e-14
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| |||||||| || || | ||| || || ||||| |||||||| || || | ||
Sbjct 2840352 TTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGC 2840293
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| |||||||| ||||| ||||||||||||||||| |||||| |||| || ||
Sbjct 2840292 TGGTCAGGAGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAACCGTGTCC 2840233
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || |||||||| || || |||||||| ||||| || || || ||
Sbjct 2840232 GAGCTTTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2840177
Score = 96.9 bits (106), Expect = 2e-14
Identities = 129/177 (73%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || | ||| || |||||| || || || || ||||||||||| | ||
Sbjct 2841036 TTGTAATCCGCCAAAGTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGC 2840977
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
||||| || ||||| ||||||||||| ||||| || |||||| || || || |||
Sbjct 2840976 TGATCCGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTGACGTTGTCGATGGTGTCA 2840917
Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || || ||| || || ||||| || || || ||||| || ||||||||
Sbjct 2840916 GAGCTCTCAACTTCCAA-AGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTG 2840861
Score = 93.3 bits (102), Expect = 3e-13
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
||||||||||| || || | ||| || || ||||| || ||||| || || | ||
Sbjct 2840580 TTATAATCAGCCAGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGC 2840521
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || || ||||| ||||| ||||||||||| |||||| ||||| || |||
Sbjct 2840520 TGGTCTGGGGGGATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTATCAATCGTGTCA 2840461
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || |||||||| || || |||||||| ||||| || || || ||
Sbjct 2840460 GAGCTTTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2840405
Score = 91.5 bits (100), Expect = 1e-12
Identities = 113/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785
|||||||| | || || | |||||||| || || || || || || ||| | ||||
Sbjct 895635 AAGTAACTAAAGCTGTGGTCACTGTTCCTGCTTACTTCAACGACTCGCAAAGGACTGCAA 895694
Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTA-ATGTTTTACGTATTATTAATGAACCAACA 474844
| || ||||| ||| | ||||| || |||| | || | || |||||||||||||| ||
Sbjct 895695 CAAAGGATGCTGGACGTATTGCTGG-CTTAGAAGTGCTCCGCATTATTAATGAACCTACT 895753
Query 474845 GCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| || |||| ||||||||| |||| |||||
Sbjct 895754 GCTGCATCACTGGCTTATGGTTTTGAAAAGAA 895785
Score = 91.5 bits (100), Expect = 1e-12
Identities = 128/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| |||||||| | ||| | ||| || || ||||| |||||||| || || | |||
Sbjct 2845930 TTGTAATCAGCCAAAGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTTTGC 2845871
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||| |||||||| ||||||||||| ||||| || ||| ||||| || ||
Sbjct 2845870 TGGTCAGGGGGAATTCCCTCCTTGTCTTGTATCTTGGCCTTTACATTGTCAATTGTGTCT 2845811
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | || |||||||| || || || || || ||||| || ||||| |||||
Sbjct 2845810 GAACTCTCAA-CCTCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATTTG 2845755
Score = 91.5 bits (100), Expect = 1e-12
Identities = 157/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608
||| |||||||| || ||||| || || ||| |||| ||| || || || || ||
Sbjct 2870363 ACGGAGACGGAGGACCAGATGGAGAGTCGACTC-CTTTTGAATG-TTGTAGTCGGCCAGT 2870306
Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668
|| | | ||| ||||||||||| || || || || | || || || || || |||||
Sbjct 2870305 GTCCGGCCATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGGAATG 2870246
Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727
|||||||| || || ||||| |||||| || || || |||| | | | | || |
Sbjct 2870245 CCTTCCTTATCCTGTATCTTCGACTTGACATTATCGATCGTGTCAGAGCTCTCCACTTCC 2870186
Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||| ||||| || ||||| || ||||| || ||||| ||
Sbjct 2870185 AA-GGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTG 2870145
Score = 89.7 bits (98), Expect = 3e-12
Identities = 210/317 (66%), Gaps = 0/317 (0%)
Strand=Plus/Plus
Query 475866 TAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAG 475925
||| | | ||||| ||| | || || || ||||| || | ||| | || ||| | || |
Sbjct 897100 TAAGTGACATTGTTCTTCTAGATGTGACACCACTATCTCTTGGTTTGGAGACACTGGGTG 897159
Query 475926 GGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTAT 475985
| | ||||| || | ||| ||||| || || |||| |||||| |||| |
Sbjct 897160 GTGTCATGACCAAGATCATTCCAAGAAACACAACTCTCCCGACTTCTAAATCAGAAGTTT 897219
Query 475986 TTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAA 476045
| || ||| ||||| |||||| | ||| || | || | |||| || ||
Sbjct 897220 TCTCTACTGCGGCTGATGGTCAAACTAGTGTTGAGATTAATGTCCTCCAAGGAGAGAGGG 897279
Query 476046 AATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTC 476105
| || || |||||||| || || | || || || |||||||| || ||||
Sbjct 897280 AGTTTGTTAGGGATAATAAATCTCTGGGCAGCTTCCGCCTCGACGGTATTCCGCCCGCTC 897339
Query 476106 CCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATG 476165
| |||| || |||||||| || || | |||||||||||||| ||||| || || ||
Sbjct 897340 CACGAGGTGTCCCTCAAATCGAGGTCAAGTTTGATATTGATGCCAATGGAATCCTCTCTG 897399
Query 476166 TTACTGCTTGTGATAAA 476182
|||||||| ||||||
Sbjct 897400 TTACTGCTGTGGATAAA 897416
Score = 87.8 bits (96), Expect = 1e-11
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| || || ||||| || | | ||| || |||||||||||||||||||| | || ||
Sbjct 2869864 TTGTAGTCCGCTAGTGTCCGGCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCGCTGC 2869805
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||| ||||| ||||| || || || || ||| ||||| |||||
Sbjct 2869804 TGGTCTGGGGGAATCCCTTCTTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCG 2869745
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | ||||| ||||| || || |||||||||||||| || || || ||
Sbjct 2869744 GAACTCTCCA-CCTCAAGAGTAATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTG 2869689
>seq203
Length=8626763
Score = 113 bits (124), Expect = 3e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616
|||||| || | || ||||| |||||| | || || || || || || |||
Sbjct 5730373 ACGGAGCACCAAGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCCGCAAGCGTCCTGCC 5730314
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||||||||| |||||||| |||||||| || | || || || || ||||| || |||||
Sbjct 5730313 ATCTTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCCGGTGGAATACCCTCCTT 5730254
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735
|||||| ||||| |||||| ||||| || |||| | | | || ||| |||||||
Sbjct 5730253 GTCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAA-CTTCTAGGGTAA 5730195
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || ||||| ||||| || || |||||
Sbjct 5730194 TTGTCTTCCCAGTGAGGGTCTTCACAAAGATTTG 5730161
Score = 100 bits (110), Expect = 2e-15
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614
|||||||| || | || || ||| || || || |||||||| || | |||| |
Sbjct 5730147 AGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAGGTTCGG 5730088
Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674
||||||||| ||||| |||||||| ||||| | || || || ||||| || ||||||
Sbjct 5730087 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCTTCC 5730028
Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734
||||||||||| ||| ||| ||| || || || || | | | ||||||||
Sbjct 5730027 TTGTCTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCACCTCAAGGGTG 5729968
Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || || || || || || |||||
Sbjct 5729967 ATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTG 5729933
Score = 96.9 bits (106), Expect = 2e-14
Identities = 435/680 (64%), Gaps = 12/680 (2%)
Strand=Plus/Minus
Query 475493 AGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAA 475552
|| || ||||||||| | || ||| | |||| ||||| | || || || || | ||
Sbjct 1982707 AGGACCGCTTGTGAAAGGGCCAAGAGGACTCTGTCTTCGACGACCCAGACGACGATCGAG 1982648
Query 475553 GTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAA 475612
| || || |||| |||||| ||||||| | || || || ||||| | ||| ||
Sbjct 1982647 ATCGACTCGCTTTATGAAGGTATTGATTTCTACGCTACAATCACTAGGGCGAGATTCGAG 1982588
Query 475613 GATATTTGTTCT--GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAG 475670
|| ||| | ||| | ||||| || || || ||||| || || ||| || |
Sbjct 1982587 GAG--TTGAACATGGATTTGTTTAGGAAGTGTATGGAGCCCGTGGAGAAATGTCTGAGGG 1982530
Query 475671 ATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAA 475730
| || || | || || || || ||||| |||||||||| || || || || || |
Sbjct 1982529 ACTCGAAGATCGATAAGAGTCAGGTTCATGATGTTGTTCTTGTTGGCGGGTCGACGAGGA 1982470
Query 475731 TTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGT 475789
| || ||| | || || ||| || | | || ||||| || |||| || |||
Sbjct 1982469 TCCCGAAAGTTC-AGCAACTCTTGCAGGACTTCTTCAATGGAAAGGAGTTG--TGCAAGA 1982413
Query 475790 GTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAG 475847
| | || |||||||| |||||||||||||| ||||| || ||||| || || || |
Sbjct 1982412 GCATTAACCCTGATGAGGCTGTTGCATATGGGGCTGCAGTGCAAGCTGCAATCTTGAGTG 1982353
Query 475848 GTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTAACTCCACTTTCATTA 475906
|| || |||||||| | | | ||| |||| | || || || || || |
Sbjct 1982352 GTGAAGGGAACGAGAAAGTGCAGGA-CTTGCTCTTGCTCGATGTCACGCCTCTGAGCCTC 1982294
Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966
||| |||| || | || || | |||||| |||||| || || || | ||||||
Sbjct 1982293 GGTATTGAGACTGCAGGTGGCGTGATGACTGTTCTTATCCCAAGGAACACGACGATCCCA 1982234
Query 475967 TGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAA 476026
|| ||| | || || || || || | |||||||| | ||| ||| ||
Sbjct 1982233 ACGAAGAAAGAGCAGGTGTTCTCGACATACGCCGATAATCAGCCGGGTGTGCTCATTCAG 1982174
Query 476027 ATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTT 476086
| | ||||| || || || | || || || || || | || | ||
Sbjct 1982173 GTGTACGAAGGCGAGAGGGCGAGGACGATGGACAACAATCTTCTGGGCAAATTCGAGCTC 1982114
Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146
|| |||||||| || || ||||| |||||||| || | ||| ||| || || |||
Sbjct 1982113 ACGGGCATTCCTCCAGCCCCAAGAGGTGTTCCTCAGATCAACGTTTGTTTCGACATCGAT 1982054
Query 476147 GCAAATGGTATTCTTAATGT 476166
|| ||||| ||| | |||||
Sbjct 1982053 GCCAATGGAATTGTCAATGT 1982034
Score = 96.9 bits (106), Expect = 2e-14
Identities = 129/177 (73%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
||||| || || ||||| ||| ||||||||| ||||| ||||| || ||||| | ||
Sbjct 5730564 TTATAGTCTGCAAGAGTCCTGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGC 5730505
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||| || |||||||||||||| || || ||| ||||| || ||
Sbjct 5730504 TGGTCCGGGGGAATACCCTCCTTGTCTTGAATTTTCGCCTTAACATTGTCAATGGTGTCC 5730445
Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | | || ||| || || || || ||||| || ||||| |||||||| ||
Sbjct 5730444 GAGCTTTCCACTTCCAA-AGTTATGGTCTTCCCGGTAAGCGTCTTCACGAAAATCTG 5730389
Score = 91.5 bits (100), Expect = 1e-12
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| |||||||| ||||| || || || ||| || | ||| || || || || ||
Sbjct 5730834 CGGAGACGGAGGACAAGGTGGAGGGTCGATTCCTTTTGGATATTGTAGTCGGCCAGTGTC 5730775
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
||| |||||||||||| || || ||||| || || | ||| || || |||||||| ||
Sbjct 5730774 CTGCCATCTTCAAGTTGTTTACCCGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCC 5730715
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731
|| ||||| ||||| || || ||| || || || || | | | || ||
Sbjct 5730714 TCTTTGTCCTGAATTTTAGCCTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCGAGA 5730655
Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || || |||||||| |||||||| ||
Sbjct 5730654 GTAATTGTCTTCCCAGTAAGAGTCTTCACGAAAATCTG 5730617
>seq116
Length=10441785
Score = 111 bits (122), Expect = 1e-18
Identities = 103/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
||||| ||||| || || |||||||| || ||||| || || || ||||| || ||
Sbjct 2152083 ACTGTCCCAGCGTACTTCAATGATTCCCAGCGTCAGGCCACCAAGGATGCTGGTGTCATC 2152024
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
||||| || ||||| | ||||| |||||||| || |||||||| || |||||||||||
Sbjct 2152023 GCAGGCCTAAATGTGATGCGTATCATTAATGAGCCTACAGCAGCTGCTATTGCTTATGGT 2151964
Query 474866 CTTGATAAGAA 474876
||||| |||||
Sbjct 2151963 CTTGACAAGAA 2151953
>seq652
Length=2384379
Score = 109 bits (120), Expect = 4e-18
Identities = 132/177 (75%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|||||||| || | ||| || ||| |||||||| || || ||||| ||||| | |||
Sbjct 465236 TTATAATCCGCCAAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGC 465177
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
||||| || ||||| ||||||||||| ||||| || ||||||| ||||| || |||
Sbjct 465176 TGATCTGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCA 465117
Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || || ||| ||| || || || || || || ||||| || || |||||
Sbjct 465116 GAGCTCTCAACTTCCAA-GGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTG 465061
Score = 98.7 bits (108), Expect = 6e-15
Identities = 154/221 (70%), Gaps = 12/221 (5%)
Strand=Plus/Minus
Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614
|||||||| || | || || || ||| || || ||||||||||| | ||| |
Sbjct 464591 AGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAAAGTGCGT 464532
Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674
||| ||||| ||||| |||||||| ||||| | || || || || || |||||||||
Sbjct 464531 CCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGGATTCCTTCC 464472
Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT------TCA 480728
|||||||| ||||| || ||| |||| | |||| |||| || |||
Sbjct 464471 TTGTCTTGTATCTTGGCCTTCACATTGTCAA------CTGTGTCTGAACTTTCAACCTCA 464418
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || || || || || || |||||||||||
Sbjct 464417 AGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTG 464377
Score = 86.0 bits (94), Expect = 4e-11
Identities = 155/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608
||| || || || |||||||| || || ||| ||| || || ||||| || ||
Sbjct 465507 ACGGAGGCGAAGCACAAGATGTAGAGTTGACTCCTTTTGGATG--TTGTAATCCGCCAGT 465450
Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668
|| | | ||| || || ||||| ||||||||||| | | || ||||| || |||||
Sbjct 465449 GTCCGGCCATCCTCGAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATG 465390
Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727
||||||||||| || ||||| ||||||| |||| ||||| | | | | | || |
Sbjct 465389 CCTTCCTTGTCCTGTATCTTAGCTTTGACATTATCAACGGTATCCGAGCTCTCGACTTCC 465330
Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || ||||| || ||||| || || || ||
Sbjct 465329 AA-AGTTATGGTCTTCCCGGTAAGGGTCTTGACAAATATCTG 465289
>seq91
Length=4251426
Score = 100 bits (110), Expect = 2e-15
Identities = 208/310 (67%), Gaps = 0/310 (0%)
Strand=Plus/Plus
Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931
||||||| ||| | || || || ||| | || | ||| | ||||| | || || |||
Sbjct 2879667 ATATTGTGCTTTTAGATGTGACACCATTATCTCTGGGTTTGGAAACTCTCGGTGGTGTTA 2879726
Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991
||||||| | || || ||||| | | || | |||||| |||| ||||| |
Sbjct 2879727 TGACTAAAATCATCCCAAGGAATACGACCTTGCCGACCTCAAAATCGGAAGTGTTTTCAA 2879786
Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051
| | |||| |||||| | ||| || | || || ||||||| || ||||
Sbjct 2879787 CGGCTGCTGACGGTCAAACCAGTGTCGAGATTAATGTCCTTCAAGGTGAGAGGGAATTTG 2879846
Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111
| ||| || || |||| | ||| ||||| || || || |||||||| | |
Sbjct 2879847 TGAGAGACAACAAATCTGTTGGCAGTTTCCGACTTGATGGCATCCCACCTGCTCCACGTG 2879906
Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171
| ||||| || |||||||||| |||||||||||||| |||||||| || ||| ||||
Sbjct 2879907 GTGTTCCGCAGATTGAAGTTAAATTTGATATTGATGCTAATGGTATCCTCTCTGTAACTG 2879966
Query 476172 CTTGTGATAA 476181
|| |||||
Sbjct 2879967 CTGTGGATAA 2879976
>seq24
Length=10012559
Score = 95.1 bits (104), Expect = 8e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
||||||| | || || || || || || ||||| || || | || || || || ||||
Sbjct 6127123 ATGCAGTTGTCACCGTCCCTGCCTACTTCAATGACTCCCAGAGGCAGGCCACCAAGGATG 6127064
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || |||||||| || ||||| | ||||| |||||||| ||||| || || ||
Sbjct 6127063 CTGGTGTCATTGCAGGGCTCAATGTCATGCGTATCATTAATGAGCCAACTGCTGCGGCCA 6127004
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
||||||||||||||||||| ||
Sbjct 6127003 TTGCTTATGGTCTTGATAAAAA 6126982
>seq18
Length=12238210
Score = 87.8 bits (96), Expect = 1e-11
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887
||||||| | | |||||| || || || || || |||||| ||||||||| |||||
Sbjct 920044 CCATATGAAAGAGCAGCTGCAGTGGGCTCGTTGATGATTCTTTCTACATCAAGCCCTGCG 919985
Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947
|| | | | |||| |||||||| | || |||||||| || || || || || ||
Sbjct 919984 ATCCTCCCAGCATCTTTTGTTGCCTGTCTCTGGGCATCATTGAAGTAGGCTGGAACAGTT 919925
Query 290948 ATAACAGCTTTTTCCACTTTCTTTTTCAAATAA 290980
|||||||||||| ||| |||| |||||||
Sbjct 919924 ATAACAGCTTTTGAAACTGACTTTCCCAAATAA 919892
>seq809
Length=1236355
Score = 86.0 bits (94), Expect = 4e-11
Identities = 193/290 (67%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931
||||||| ||| | || || | ||| | || | ||| | ||||| | || || |||
Sbjct 230465 ATATTGTGCTTTTAGATGTGATACCATTATCTCTGGGTTTGGAAACTCTCGGTGGTGTTA 230524
Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991
||||||| | || || ||||| | | ||| | ||||||| |||| ||||| |
Sbjct 230525 TGACTAAAATCATCACAAGGAATACGACCTTGCCAACCTCAAAATCAGAAGTGTTTTCAA 230584
Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051
| | |||| |||||| | ||| || | || || ||||||| || | ||
Sbjct 230585 CGGCTGCTGACGGTCAAACCAGTGTCGAGATTAATGTCCTTCAAGGTGAGAGGGAGTTTG 230644
Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111
| ||| || || ||||| | ||| || || || || || |||||||| | |
Sbjct 230645 TGAGAGACAACAAATCCCTTGGCAGTTTCCGACTCGATGGCATCCCACCTGCTCCACGTG 230704
Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTT 476161
| ||||| || |||||||| | || ||||||||||| |||||||| |||
Sbjct 230705 GTGTTCCGCAGATTGAAGTGAAATTCGATATTGATGCTAATGGTATCCTT 230754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3266618856863648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |