Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq161 116 2e-20 seq49 114 8e-20 seq203 113 3e-19 seq116 111 1e-18 seq652 109 4e-18 seq91 100 2e-15 seq24 95.1 8e-14 seq18 87.8 1e-11 seq809 86.0 4e-11 >seq161 Length=5110746 Score = 116 bits (128), Expect = 2e-20 Identities = 141/187 (75%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 474680 GTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATG 474737 ||| || | || |||||| |||| || ||| | || ||||| |||| |||| | | | Sbjct 4994064 GTTCTAACAAAGATGAAAGAAACGGCTGAGG-CTTA-CTTGGGGAAGACAGTATCAAAAG 4994007 Query 474738 CAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGG 474797 | || ||||| |||||||| || || |||||| | || | || ||||| |||||||| | Sbjct 4994006 CTGTGATTACGGTTCCAGCTTACTTCAATGATGCCCAGAGACAGGCAACCAAAGATGCTG 4993947 Query 474798 GAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTG 474857 | ||||||||||||||| | || | || |||||||| ||||| ||||| |||||| Sbjct 4993946 GCAGAATTGCAGGTCTTGACGTGCAGAGAATCATTAATGAGCCAACTGCAGCTGCACTTT 4993887 Query 474858 CTTATGG 474864 ||||||| Sbjct 4993886 CTTATGG 4993880 Score = 100 bits (110), Expect = 2e-15 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887 ||||| | | || |||||| ||||| ||||| || ||||| || |||||||||||| Sbjct 4993880 CCATAAGAAAGTGCAGCTGCAGTTGGCTCATTAATGATTCTCTGCACGTCAAGACCTGCA 4993939 Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947 ||| | | | |||| |||||||| | || |||||||| || ||||| || || ||| Sbjct 4993940 ATTCTGCCAGCATCTTTGGTTGCCTGTCTCTGGGCATCATTGAAGTAAGCTGGAACCGTA 4993999 Query 290948 ATAACAGCTTTTTCCACTTTCTTTTTCAAATAATTTTCTGCCATTTGTTTTAT 291000 || ||||||||| ||| |||| ||| ||| || ||| ||| ||| || Sbjct 4994000 ATCACAGCTTTTGATACTGTCTTCCCCAAGTAAGCCTCAGCCGTTTCTTTCAT 4994052 >seq49 Length=4798478 Score = 114 bits (126), Expect = 8e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| || ||||| || |||||| || || || |||||||||||||| | || Sbjct 2870092 TTATAATCTGCCAGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGC 2870033 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || ||||| ||||| ||||| ||||| ||| ||||||| || ||||| ||| Sbjct 2870032 TGATCCGGGGGAATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCA 2869973 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || || ||| || || ||||| || || || ||||| || || ||||| Sbjct 2869972 GAGCTCTCAACTTCCAA-AGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTG 2869917 Score = 105 bits (116), Expect = 4e-17 Identities = 131/177 (74%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || | ||| || |||||| || || || |||||||||||||| | || Sbjct 2847024 TTGTAATCCGCCAAAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGC 2846965 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || ||||| ||||||||||| ||||| ||| |||||| || || || ||| Sbjct 2846964 TGATCCGGGGGAATGCCTTCCTTGTCCTGAATTTTTGCTTTGACGTTGTCGATGGTGTCA 2846905 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || || ||| || || ||||| || || || ||||| || |||||||| Sbjct 2846904 GAGCTCTCAACTTCCAA-AGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTG 2846849 Score = 104 bits (114), Expect = 2e-16 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| |||||||| |||||||| || || ||| |||| ||| ||| ||||| || || Sbjct 2841307 ACGCAGACGGAGGACAAGATGGAGCGTCGACTC-CTTTTGAAT-ATTGTAATCGGCCAGT 2841250 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| || || || || || |||||||| | || || || || || ||||| Sbjct 2841249 GTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGAATG 2841190 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727 ||||||||||| || ||||| ||||||| ||||| || || | | | | | || | Sbjct 2841189 CCTTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCGACTTCC 2841130 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || || || |||||||| || ||||| || Sbjct 2841129 AA-AGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTG 2841089 Score = 102 bits (112), Expect = 5e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || |||||||| || || | ||| || || ||||| |||||||| || || | || Sbjct 2869636 TTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGC 2869577 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || |||||||| ||||| ||||||||||||||||| |||||| |||| || || Sbjct 2869576 TGGTCAGGAGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAACCGTGTCC 2869517 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | ||||||||||| || || |||||||| ||||| || || || || Sbjct 2869516 GAGCTTTCAACCTCAAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2869461 Score = 100 bits (110), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || || | |||||| || ||| || | || |||||||| || || | Sbjct 2846197 AGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCCAGGGTGCGC 2846138 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || || ||||| |||||||| || || | || || |||||||| ||||| || Sbjct 2846137 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCT 2846078 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 |||||||||||||| |||||| ||||| || || | | | | || |||||| Sbjct 2846077 TTGTCTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACCTCGAGGGTA 2846018 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || |||||||| ||||| || || || || Sbjct 2846017 ATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2845983 Score = 96.9 bits (106), Expect = 2e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || |||||||| || || | ||| || || ||||| |||||||| || || | || Sbjct 2840352 TTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGC 2840293 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || |||||||| ||||| ||||||||||||||||| |||||| |||| || || Sbjct 2840292 TGGTCAGGAGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAACCGTGTCC 2840233 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || |||||||| || || |||||||| ||||| || || || || Sbjct 2840232 GAGCTTTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2840177 Score = 96.9 bits (106), Expect = 2e-14 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || | ||| || |||||| || || || || ||||||||||| | || Sbjct 2841036 TTGTAATCCGCCAAAGTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGC 2840977 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || ||||| ||||||||||| ||||| || |||||| || || || ||| Sbjct 2840976 TGATCCGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTGACGTTGTCGATGGTGTCA 2840917 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || || ||| || || ||||| || || || ||||| || |||||||| Sbjct 2840916 GAGCTCTCAACTTCCAA-AGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTG 2840861 Score = 93.3 bits (102), Expect = 3e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||||||||| || || | ||| || || ||||| || ||||| || || | || Sbjct 2840580 TTATAATCAGCCAGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGC 2840521 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || || ||||| ||||| ||||||||||| |||||| ||||| || ||| Sbjct 2840520 TGGTCTGGGGGGATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTATCAATCGTGTCA 2840461 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || |||||||| || || |||||||| ||||| || || || || Sbjct 2840460 GAGCTTTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 2840405 Score = 91.5 bits (100), Expect = 1e-12 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785 |||||||| | || || | |||||||| || || || || || || ||| | |||| Sbjct 895635 AAGTAACTAAAGCTGTGGTCACTGTTCCTGCTTACTTCAACGACTCGCAAAGGACTGCAA 895694 Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTA-ATGTTTTACGTATTATTAATGAACCAACA 474844 | || ||||| ||| | ||||| || |||| | || | || |||||||||||||| || Sbjct 895695 CAAAGGATGCTGGACGTATTGCTGG-CTTAGAAGTGCTCCGCATTATTAATGAACCTACT 895753 Query 474845 GCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || || |||| ||||||||| |||| ||||| Sbjct 895754 GCTGCATCACTGGCTTATGGTTTTGAAAAGAA 895785 Score = 91.5 bits (100), Expect = 1e-12 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || |||||||| | ||| | ||| || || ||||| |||||||| || || | ||| Sbjct 2845930 TTGTAATCAGCCAAAGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTTTGC 2845871 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| |||||||| ||||||||||| ||||| || ||| ||||| || || Sbjct 2845870 TGGTCAGGGGGAATTCCCTCCTTGTCTTGTATCTTGGCCTTTACATTGTCAATTGTGTCT 2845811 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | || |||||||| || || || || || ||||| || ||||| ||||| Sbjct 2845810 GAACTCTCAA-CCTCAAGGGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAGATTTG 2845755 Score = 91.5 bits (100), Expect = 1e-12 Identities = 157/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| |||||||| || ||||| || || ||| |||| ||| || || || || || Sbjct 2870363 ACGGAGACGGAGGACCAGATGGAGAGTCGACTC-CTTTTGAATG-TTGTAGTCGGCCAGT 2870306 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| ||||||||||| || || || || | || || || || || ||||| Sbjct 2870305 GTCCGGCCATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGGAATG 2870246 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727 |||||||| || || ||||| |||||| || || || |||| | | | | || | Sbjct 2870245 CCTTCCTTATCCTGTATCTTCGACTTGACATTATCGATCGTGTCAGAGCTCTCCACTTCC 2870186 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||| ||||| || ||||| || ||||| || ||||| || Sbjct 2870185 AA-GGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTG 2870145 Score = 89.7 bits (98), Expect = 3e-12 Identities = 210/317 (66%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 475866 TAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAG 475925 ||| | | ||||| ||| | || || || ||||| || | ||| | || ||| | || | Sbjct 897100 TAAGTGACATTGTTCTTCTAGATGTGACACCACTATCTCTTGGTTTGGAGACACTGGGTG 897159 Query 475926 GGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTAT 475985 | | ||||| || | ||| ||||| || || |||| |||||| |||| | Sbjct 897160 GTGTCATGACCAAGATCATTCCAAGAAACACAACTCTCCCGACTTCTAAATCAGAAGTTT 897219 Query 475986 TTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAA 476045 | || ||| ||||| |||||| | ||| || | || | |||| || || Sbjct 897220 TCTCTACTGCGGCTGATGGTCAAACTAGTGTTGAGATTAATGTCCTCCAAGGAGAGAGGG 897279 Query 476046 AATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTC 476105 | || || |||||||| || || | || || || |||||||| || |||| Sbjct 897280 AGTTTGTTAGGGATAATAAATCTCTGGGCAGCTTCCGCCTCGACGGTATTCCGCCCGCTC 897339 Query 476106 CCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATG 476165 | |||| || |||||||| || || | |||||||||||||| ||||| || || || Sbjct 897340 CACGAGGTGTCCCTCAAATCGAGGTCAAGTTTGATATTGATGCCAATGGAATCCTCTCTG 897399 Query 476166 TTACTGCTTGTGATAAA 476182 |||||||| |||||| Sbjct 897400 TTACTGCTGTGGATAAA 897416 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || || ||||| || | | ||| || |||||||||||||||||||| | || || Sbjct 2869864 TTGTAGTCCGCTAGTGTCCGGCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCGCTGC 2869805 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| ||||| ||||| || || || || ||| ||||| ||||| Sbjct 2869804 TGGTCTGGGGGAATCCCTTCTTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCG 2869745 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | ||||| ||||| || || |||||||||||||| || || || || Sbjct 2869744 GAACTCTCCA-CCTCAAGAGTAATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTG 2869689 >seq203 Length=8626763 Score = 113 bits (124), Expect = 3e-19 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 |||||| || | || ||||| |||||| | || || || || || || ||| Sbjct 5730373 ACGGAGCACCAAGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCCGCAAGCGTCCTGCC 5730314 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||||||| |||||||| |||||||| || | || || || || ||||| || ||||| Sbjct 5730313 ATCTTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCCGGTGGAATACCCTCCTT 5730254 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 |||||| ||||| |||||| ||||| || |||| | | | || ||| ||||||| Sbjct 5730253 GTCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAA-CTTCTAGGGTAA 5730195 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || ||||| ||||| || || ||||| Sbjct 5730194 TTGTCTTCCCAGTGAGGGTCTTCACAAAGATTTG 5730161 Score = 100 bits (110), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||| || | || || ||| || || || |||||||| || | |||| | Sbjct 5730147 AGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAGGTTCGG 5730088 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||||||||| ||||| |||||||| ||||| | || || || ||||| || |||||| Sbjct 5730087 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCTTCC 5730028 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 ||||||||||| ||| ||| ||| || || || || | | | |||||||| Sbjct 5730027 TTGTCTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCACCTCAAGGGTG 5729968 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || || || || ||||| Sbjct 5729967 ATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTG 5729933 Score = 96.9 bits (106), Expect = 2e-14 Identities = 435/680 (64%), Gaps = 12/680 (2%) Strand=Plus/Minus Query 475493 AGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAA 475552 || || ||||||||| | || ||| | |||| ||||| | || || || || | || Sbjct 1982707 AGGACCGCTTGTGAAAGGGCCAAGAGGACTCTGTCTTCGACGACCCAGACGACGATCGAG 1982648 Query 475553 GTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAA 475612 | || || |||| |||||| ||||||| | || || || ||||| | ||| || Sbjct 1982647 ATCGACTCGCTTTATGAAGGTATTGATTTCTACGCTACAATCACTAGGGCGAGATTCGAG 1982588 Query 475613 GATATTTGTTCT--GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAG 475670 || ||| | ||| | ||||| || || || ||||| || || ||| || | Sbjct 1982587 GAG--TTGAACATGGATTTGTTTAGGAAGTGTATGGAGCCCGTGGAGAAATGTCTGAGGG 1982530 Query 475671 ATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAA 475730 | || || | || || || || ||||| |||||||||| || || || || || | Sbjct 1982529 ACTCGAAGATCGATAAGAGTCAGGTTCATGATGTTGTTCTTGTTGGCGGGTCGACGAGGA 1982470 Query 475731 TTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGT 475789 | || ||| | || || ||| || | | || ||||| || |||| || ||| Sbjct 1982469 TCCCGAAAGTTC-AGCAACTCTTGCAGGACTTCTTCAATGGAAAGGAGTTG--TGCAAGA 1982413 Query 475790 GTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAG 475847 | | || |||||||| |||||||||||||| ||||| || ||||| || || || | Sbjct 1982412 GCATTAACCCTGATGAGGCTGTTGCATATGGGGCTGCAGTGCAAGCTGCAATCTTGAGTG 1982353 Query 475848 GTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTAACTCCACTTTCATTA 475906 || || |||||||| | | | ||| |||| | || || || || || | Sbjct 1982352 GTGAAGGGAACGAGAAAGTGCAGGA-CTTGCTCTTGCTCGATGTCACGCCTCTGAGCCTC 1982294 Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966 ||| |||| || | || || | |||||| |||||| || || || | |||||| Sbjct 1982293 GGTATTGAGACTGCAGGTGGCGTGATGACTGTTCTTATCCCAAGGAACACGACGATCCCA 1982234 Query 475967 TGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAA 476026 || ||| | || || || || || | |||||||| | ||| ||| || Sbjct 1982233 ACGAAGAAAGAGCAGGTGTTCTCGACATACGCCGATAATCAGCCGGGTGTGCTCATTCAG 1982174 Query 476027 ATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTT 476086 | | ||||| || || || | || || || || || | || | || Sbjct 1982173 GTGTACGAAGGCGAGAGGGCGAGGACGATGGACAACAATCTTCTGGGCAAATTCGAGCTC 1982114 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 || |||||||| || || ||||| |||||||| || | ||| ||| || || ||| Sbjct 1982113 ACGGGCATTCCTCCAGCCCCAAGAGGTGTTCCTCAGATCAACGTTTGTTTCGACATCGAT 1982054 Query 476147 GCAAATGGTATTCTTAATGT 476166 || ||||| ||| | ||||| Sbjct 1982053 GCCAATGGAATTGTCAATGT 1982034 Score = 96.9 bits (106), Expect = 2e-14 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| || || ||||| ||| ||||||||| ||||| ||||| || ||||| | || Sbjct 5730564 TTATAGTCTGCAAGAGTCCTGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGC 5730505 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| || |||||||||||||| || || ||| ||||| || || Sbjct 5730504 TGGTCCGGGGGAATACCCTCCTTGTCTTGAATTTTCGCCTTAACATTGTCAATGGTGTCC 5730445 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | | || ||| || || || || ||||| || ||||| |||||||| || Sbjct 5730444 GAGCTTTCCACTTCCAA-AGTTATGGTCTTCCCGGTAAGCGTCTTCACGAAAATCTG 5730389 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| ||||| || || || ||| || | ||| || || || || || Sbjct 5730834 CGGAGACGGAGGACAAGGTGGAGGGTCGATTCCTTTTGGATATTGTAGTCGGCCAGTGTC 5730775 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||||||||| || || ||||| || || | ||| || || |||||||| || Sbjct 5730774 CTGCCATCTTCAAGTTGTTTACCCGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCC 5730715 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||| ||||| || || ||| || || || || | | | || || Sbjct 5730714 TCTTTGTCCTGAATTTTAGCCTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCGAGA 5730655 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || |||||||| |||||||| || Sbjct 5730654 GTAATTGTCTTCCCAGTAAGAGTCTTCACGAAAATCTG 5730617 >seq116 Length=10441785 Score = 111 bits (122), Expect = 1e-18 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| ||||| || || |||||||| || ||||| || || || ||||| || || Sbjct 2152083 ACTGTCCCAGCGTACTTCAATGATTCCCAGCGTCAGGCCACCAAGGATGCTGGTGTCATC 2152024 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||| || ||||| | ||||| |||||||| || |||||||| || ||||||||||| Sbjct 2152023 GCAGGCCTAAATGTGATGCGTATCATTAATGAGCCTACAGCAGCTGCTATTGCTTATGGT 2151964 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 2151963 CTTGACAAGAA 2151953 >seq652 Length=2384379 Score = 109 bits (120), Expect = 4e-18 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| || | ||| || ||| |||||||| || || ||||| ||||| | ||| Sbjct 465236 TTATAATCCGCCAAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGC 465177 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || ||||| ||||||||||| ||||| || ||||||| ||||| || ||| Sbjct 465176 TGATCTGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCA 465117 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || || ||| ||| || || || || || || ||||| || || ||||| Sbjct 465116 GAGCTCTCAACTTCCAA-GGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTG 465061 Score = 98.7 bits (108), Expect = 6e-15 Identities = 154/221 (70%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||| || | || || || ||| || || ||||||||||| | ||| | Sbjct 464591 AGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCCAAAGTGCGT 464532 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| ||||| ||||| |||||||| ||||| | || || || || || ||||||||| Sbjct 464531 CCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGGATTCCTTCC 464472 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT------TCA 480728 |||||||| ||||| || ||| |||| | |||| |||| || ||| Sbjct 464471 TTGTCTTGTATCTTGGCCTTCACATTGTCAA------CTGTGTCTGAACTTTCAACCTCA 464418 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || || || ||||||||||| Sbjct 464417 AGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTG 464377 Score = 86.0 bits (94), Expect = 4e-11 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| || || || |||||||| || || ||| ||| || || ||||| || || Sbjct 465507 ACGGAGGCGAAGCACAAGATGTAGAGTTGACTCCTTTTGGATG--TTGTAATCCGCCAGT 465450 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| || || ||||| ||||||||||| | | || ||||| || ||||| Sbjct 465449 GTCCGGCCATCCTCGAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATG 465390 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727 ||||||||||| || ||||| ||||||| |||| ||||| | | | | | || | Sbjct 465389 CCTTCCTTGTCCTGTATCTTAGCTTTGACATTATCAACGGTATCCGAGCTCTCGACTTCC 465330 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || ||||| || || || || Sbjct 465329 AA-AGTTATGGTCTTCCCGGTAAGGGTCTTGACAAATATCTG 465289 >seq91 Length=4251426 Score = 100 bits (110), Expect = 2e-15 Identities = 208/310 (67%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 ||||||| ||| | || || || ||| | || | ||| | ||||| | || || ||| Sbjct 2879667 ATATTGTGCTTTTAGATGTGACACCATTATCTCTGGGTTTGGAAACTCTCGGTGGTGTTA 2879726 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 ||||||| | || || ||||| | | || | |||||| |||| ||||| | Sbjct 2879727 TGACTAAAATCATCCCAAGGAATACGACCTTGCCGACCTCAAAATCGGAAGTGTTTTCAA 2879786 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | | |||| |||||| | ||| || | || || ||||||| || |||| Sbjct 2879787 CGGCTGCTGACGGTCAAACCAGTGTCGAGATTAATGTCCTTCAAGGTGAGAGGGAATTTG 2879846 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 | ||| || || |||| | ||| ||||| || || || |||||||| | | Sbjct 2879847 TGAGAGACAACAAATCTGTTGGCAGTTTCCGACTTGATGGCATCCCACCTGCTCCACGTG 2879906 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 | ||||| || |||||||||| |||||||||||||| |||||||| || ||| |||| Sbjct 2879907 GTGTTCCGCAGATTGAAGTTAAATTTGATATTGATGCTAATGGTATCCTCTCTGTAACTG 2879966 Query 476172 CTTGTGATAA 476181 || ||||| Sbjct 2879967 CTGTGGATAA 2879976 >seq24 Length=10012559 Score = 95.1 bits (104), Expect = 8e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| | || || || || || || ||||| || || | || || || || |||| Sbjct 6127123 ATGCAGTTGTCACCGTCCCTGCCTACTTCAATGACTCCCAGAGGCAGGCCACCAAGGATG 6127064 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||||| || ||||| | ||||| |||||||| ||||| || || || Sbjct 6127063 CTGGTGTCATTGCAGGGCTCAATGTCATGCGTATCATTAATGAGCCAACTGCTGCGGCCA 6127004 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 ||||||||||||||||||| || Sbjct 6127003 TTGCTTATGGTCTTGATAAAAA 6126982 >seq18 Length=12238210 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887 ||||||| | | |||||| || || || || || |||||| ||||||||| ||||| Sbjct 920044 CCATATGAAAGAGCAGCTGCAGTGGGCTCGTTGATGATTCTTTCTACATCAAGCCCTGCG 919985 Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947 || | | | |||| |||||||| | || |||||||| || || || || || || Sbjct 919984 ATCCTCCCAGCATCTTTTGTTGCCTGTCTCTGGGCATCATTGAAGTAGGCTGGAACAGTT 919925 Query 290948 ATAACAGCTTTTTCCACTTTCTTTTTCAAATAA 290980 |||||||||||| ||| |||| ||||||| Sbjct 919924 ATAACAGCTTTTGAAACTGACTTTCCCAAATAA 919892 >seq809 Length=1236355 Score = 86.0 bits (94), Expect = 4e-11 Identities = 193/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 ||||||| ||| | || || | ||| | || | ||| | ||||| | || || ||| Sbjct 230465 ATATTGTGCTTTTAGATGTGATACCATTATCTCTGGGTTTGGAAACTCTCGGTGGTGTTA 230524 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 ||||||| | || || ||||| | | ||| | ||||||| |||| ||||| | Sbjct 230525 TGACTAAAATCATCACAAGGAATACGACCTTGCCAACCTCAAAATCAGAAGTGTTTTCAA 230584 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | | |||| |||||| | ||| || | || || ||||||| || | || Sbjct 230585 CGGCTGCTGACGGTCAAACCAGTGTCGAGATTAATGTCCTTCAAGGTGAGAGGGAGTTTG 230644 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 | ||| || || ||||| | ||| || || || || || |||||||| | | Sbjct 230645 TGAGAGACAACAAATCCCTTGGCAGTTTCCGACTCGATGGCATCCCACCTGCTCCACGTG 230704 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTT 476161 | ||||| || |||||||| | || ||||||||||| |||||||| ||| Sbjct 230705 GTGTTCCGCAGATTGAAGTGAAATTCGATATTGATGCTAATGGTATCCTT 230754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266618856863648