Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq444 538 4e-148
seq10427 381 7e-101
seq32303 297 2e-75
seq31551 233 2e-56
seq31730 174 2e-38
seq34854 154 2e-32
seq31523 145 9e-30
seq155 125 8e-24
seq85 125 8e-24
seq77 114 1e-20
seq80 111 2e-19
seq134 102 9e-17
seq231 95.1 1e-14
seq31544 82.4 9e-11
>seq444
Length=4271
Score = 538 bits (596), Expect = 4e-148
Identities = 721/1000 (72%), Gaps = 2/1000 (0%)
Strand=Plus/Plus
Query 124033 TGTAGACTCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAAC 124092
|| || |||| ||| ||||||||||| ||||||||||| ||||| | ||||||||||||
Sbjct 116 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 175
Query 124093 TTCCATACCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTT 124152
||||||||| | ||| || | ||| | || |||| |||| || | | ||| |
Sbjct 176 TTCCATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTG 235
Query 124153 AGCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGAT 124212
| |||||| ||||||||||| || ||||||||||| | |||||| ||||| || | ||
Sbjct 236 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAAT 295
Query 124213 ACCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACT 124272
||| | || || ||||| | || ||| || || || | |||| |||||| || | |
Sbjct 296 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 355
Query 124273 TCTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGC 124332
| || |||||||| |||||| ||||| || | || ||||| |||||||| || ||
Sbjct 356 ACGAGAATTGTTGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCGTGAGCAGC 415
Query 124333 TACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTG 124392
||| |||||||| |||||||||||||| ||||| | ||||| | || || || |
Sbjct 416 TACAATGTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATT 475
Query 124393 CTCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAA 124452
||||| ||||| ||||| | | ||| || || | ||||||||||| || || |
Sbjct 476 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAG 535
Query 124453 AGATCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATG 124512
|| || ||||| | || ||||| ||| |||||| || || ||||| |||||||| ||
Sbjct 536 GGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTG 595
Query 124513 CTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATC 124572
||| || ||||| || | |||||||||||||||||| ||||| || || |||||||||||
Sbjct 596 CTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 655
Query 124573 AGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGG 124632
||| || |||||||||| ||| || | ||||| ||||| ||||| | || ||
Sbjct 656 AGAAAAACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGG 715
Query 124633 TGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTG 124692
|||||||| |||||| |||||||||||||| || | | | | ||||||||||
Sbjct 716 AGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTC 775
Query 124693 TCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACC 124752
| ||||| || | | ||||| | ||||| | || | | | |||||||||
Sbjct 776 ACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACC 835
Query 124753 ACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCC 124812
|| || || | |||||||||||| | ||| ||||||||||||||||| || || | |||
Sbjct 836 GCCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATTGGGTAAAAATGCAATCC 895
Query 124813 GATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAA-AG 124871
||||| || | |||| || ||||| || || || ||||| || || ||||| ||
Sbjct 896 AATAGCTGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTA-AAGAAGAG 954
Query 124872 AACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAA 124931
| || | || ||||| | || || || ||||| || ||||| || ||||| ||||| |
Sbjct 955 ATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGA 1014
Query 124932 CGATGAAACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAA 124991
|| ||| | | ||| || | |||| || ||||| | |||||||||||| ||||
Sbjct 1015 TAATAAAAACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAA 1074
Query 124992 CATAAATTCTGTTGTTTGTTGATGTTACCCACTCACAGAA 125031
|||| | ||| | || |||| ||| | ||||||
Sbjct 1075 TGTAAAGACGGTTTTCAGTGCTAGTTATCCAGTTACAGAA 1114
>seq10427
Length=4047
Score = 381 bits (422), Expect = 7e-101
Identities = 707/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||||| || || || ||||||| || || ||||| || ||
Sbjct 1792 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 1733
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | |||||| || || ||||||||
Sbjct 1732 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAA 1673
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || ||||| ||||| ||||| | || || || || || ||||| || || |
Sbjct 1672 AGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 1613
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | |||| ||| || | || | || |||| | ||| | || || ||
Sbjct 1612 TAGGTTCAAAGCTAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 1553
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || |||||
Sbjct 1552 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGA 1493
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | ||| || || | ||| |||||||||||| | || || || | || ||
Sbjct 1492 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGC 1433
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| | || ||| || ||||| | || ||
Sbjct 1432 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 1394
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||||||||||| || ||||| | || | || |||| || || ||
Sbjct 1393 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGAC 1334
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| |||||||| || || || ||||| | || | ||| |
Sbjct 1333 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 1274
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || || || ||||| || || || |||||||||| |||||||||||
Sbjct 1273 TCGAAATATAGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGG 1214
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| || || |||| | || || || || | |||||||||||| ||| || ||
Sbjct 1213 ATAAATTAGGAAGACAGAAACAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATA 1154
Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585
||||| | ||| || || | |||||||| | | ||| |||||||| | | |
Sbjct 1153 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGC 1094
Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645
|| | || || | || ||||| ||||||||| || | ||| |||||||| ||
Sbjct 1093 GAAAGCGCCGTGGAGAGCAACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAA 1034
Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705
||||||||||||||| ||||| || |||| | | ||| | | | | ||||
Sbjct 1033 ATCTCCTTGTGCTTCAGGACCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 974
Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765
|| || ||||| || ||||| || || || || | ||| ||| || | |||||
Sbjct 973 AGTAGAAACTGCAGCGGTTAAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATG 914
Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825
||||||||||| || || ||||| || ||| ||||||||| || | | | ||| ||
Sbjct 913 AGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 854
Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885
|||||| | || || ||||||||||| |||| || || || || || ||| ||||||
Sbjct 853 ACAAGGAAAGAGCAATAGACCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 794
Query 123886 GTCGTCAAGAACATCAAA 123903
||| || | || ||||||
Sbjct 793 GTCATCCATAATATCAAA 776
>seq32303
Length=834
Score = 297 bits (328), Expect = 2e-75
Identities = 445/632 (70%), Gaps = 0/632 (0%)
Strand=Plus/Plus
Query 123272 TCTTCATACAATGTGTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCT 123331
|||||| | || || || | || || ||||||||||| || ||||| | || | ||
Sbjct 105 TCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATAGCGCATAGGAGAGCAGCGCCC 164
Query 123332 AGTATTCCTGCAACACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGT 123391
| || || ||||| |||||||| |||||||| |||||||| || || || |||||
Sbjct 165 AATACACCGGCAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGG 224
Query 123392 ATGAATAAGATATAACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTG 123451
| || | ||| | ||||| || ||||| ||||| || || || ||||||||||
Sbjct 225 AAAAAAAGGATGAAGCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCA 284
Query 123452 TGCTGACCTAGTGGATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAAT 123511
||||||||||||||| ||||| || | | || || || || | |||| |||
Sbjct 285 GACTGACCTAGTGGATAAATCAGGAATACAGAAACAAAAACAGCAATTGGACCAGAAAAT 344
Query 123512 GCGAGTGCGTTGTAAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATG 123571
|||| ||| || ||||||| | ||| || || | |||||||| | | ||||
Sbjct 345 GCGATTGCATTATAAGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATG 404
Query 123572 AAACCTATGAGTCCAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGT 123631
|||||||| ||||| || | || || | || ||||| |||| ||||| || | |||
Sbjct 405 AAACCTATTAGTCCGAAAGCGCCGTGGAGAGCCACAAAAGTCCACAGACCACCTAATTGG 464
Query 123632 AACCAACGAACGAATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCC 123691
|||||||| || ||||||||||||||| ||||| || |||| | | ||| |
Sbjct 465 CACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCT 524
Query 123692 ATTGCGTCACCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAA 123751
| | | |||| || || ||||| || ||||||||||| ||| || | ||| |||
Sbjct 525 AAACTATTAGCAGGAGTAGAAACTGCGGCAGTTAAGAAGTTGCATCCTTCCAAATAGGAA 584
Query 123752 GATGCAATACCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCG 123811
|| | ||||| ||||||||||| || || ||||| || ||| ||||||||||||
Sbjct 585 CTGGCCAATCCATGGGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCACCT 644
Query 123812 ATTGATAGATACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGA 123871
| | | ||| |||||||| | || || ||||| ||||| |||| || || |||||
Sbjct 645 AAGGCGAAATAGGCACAAGGAAAGAGCAATAGACCGGACCAACCTACAAAAACGAAACGG 704
Query 123872 TCTCTCTTTAACCAGTCGTCAAGAACATCAAA 123903
||||| ||||||||| || | || ||||||
Sbjct 705 TCTCTACGTAACCAGTCATCCATAATATCAAA 736
>seq31551
Length=1713
Score = 233 bits (258), Expect = 2e-56
Identities = 311/431 (72%), Gaps = 6/431 (1%)
Strand=Plus/Plus
Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099
||| ||| ||||||||||| |||||||| || ||||| | |||||||||||||||||||
Sbjct 719 TCAACAGCAGCTAGGTCTAGGGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 778
Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGT-----TGGGACGAT-TTTTCCGTTA 124153
|| | ||| || | ||| | | |||| |||| || | | || |||||| | |
Sbjct 779 CCAAGGTTAGCACGGTTAATGAGATCAGCCCAGGTATTAATTACATGACCTTTTCCTTGA 838
Query 124154 GCATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATA 124213
|||||| || |||||||| || |||||||| || |||| || ||||| |||| |||
Sbjct 839 CTATCAACTACAGATTGGTTGAAATTGAAACCGTTTAAGTGAAAAGCCATGGTGCTAATA 898
Query 124214 CCCATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTT 124273
|| | || || ||||| | || ||| ||||| || | ||||||||||| || |
Sbjct 899 CCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAGGAA 958
Query 124274 CTTGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCT 124333
| || ||||||| |||||| |||||||| | || ||||| ||||| || || |||
Sbjct 959 CGAGAATTGTTGACACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCT 1018
Query 124334 ACTATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGC 124393
|| || || || |||||||||||||| ||||| | ||||| || || || |
Sbjct 1019 ACGATATTATAAGTTTCTTCTTCTTGACCGAATCTGTAACCTACATTAGCAGATTCATTT 1078
Query 124394 TCTGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAA 124453
||||| ||||| ||||| | | ||| || || | ||||||||||| || ||||| |
Sbjct 1079 TCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGA 1138
Query 124454 GATCCTCCGAA 124464
|| || |||||
Sbjct 1139 GAGCCGCCGAA 1149
>seq31730
Length=297
Score = 174 bits (192), Expect = 2e-38
Identities = 210/286 (73%), Gaps = 0/286 (0%)
Strand=Plus/Minus
Query 124406 CTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAAC 124465
||||| | | ||| || || | ||||||||||| || ||||| || || |||||
Sbjct 296 CTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 237
Query 124466 ATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAA 124525
| || ||||| ||| |||||| || || ||||| || ||||| ||||| || |||||
Sbjct 236 ACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAAT 177
Query 124526 ACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCC 124585
|| | ||| |||||||||||||| || || || || |||||||||||||| || ||
Sbjct 176 ACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCT 117
Query 124586 TGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCA 124645
||||||| |||||| | ||||| ||||| ||||| | || || |||||||| |||
Sbjct 116 TGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 57
Query 124646 ACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACT 124691
||| |||||||| ||||| || | | | | ||||||||||
Sbjct 56 ACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACT 11
>seq34854
Length=328
Score = 154 bits (170), Expect = 2e-32
Identities = 213/293 (73%), Gaps = 4/293 (1%)
Strand=Plus/Minus
Query 124741 CTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTA 124800
|| ||||||||| || || || |||||||||||||||| ||| |||||||| ||||||||
Sbjct 322 CTCATAAGGACCGCCGTTGTATAACCATTCATCAACAGATGCCGCTTCCCATATTGGGTA 263
Query 124801 GAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACC 124860
|| || | || ||||| || | |||| || ||||| ||||| || ||||| ||
Sbjct 262 AAAATGCAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCCGAGATAATATTGTTTCC 203
Query 124861 ATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGC 124920
||| | | ||| || | || ||||| | || || || ||||| || ||||| || ||
Sbjct 202 ATAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGC 143
Query 124921 AATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACAC 124979
||| || |||| || || ||| | | ||| || | |||| || ||||| | |||||
Sbjct 142 AATGAAGGCAATAATAAATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAC 84
Query 124980 CAAACCAACCAACATAAATTCTGTTGTTTGTTGAT-GTTACCCACTCACAGAA 125031
||||||| |||| |||| | ||| || | || | |||| ||| | ||||||
Sbjct 83 CAAACCATCCAATGTAAAGACGGTT-TTCGGTGCTGGTTATCCAGTTACAGAA 32
>seq31523
Length=225
Score = 145 bits (160), Expect = 9e-30
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 124175 AAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAACCATACA 124234
|| ||||||||||| | |||||| ||||| |||| |||||| | || || ||||| | |
Sbjct 224 AAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAACCAGATA 165
Query 124235 CATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAATGAAGCA 124294
| ||| ||||| || | |||||||||||||| | | | || |||||||| ||||
Sbjct 164 CCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTAGCA 105
Query 124295 TACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCT 124354
|| |||||||| | || ||||| ||||| || || ||||| || || || ||||||||
Sbjct 104 TATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTCC 45
Query 124355 TCTTGTCCGAACTTATAACC 124374
||||| ||||| | |||||
Sbjct 44 TCTTGACCGAATCTGTAACC 25
>seq155
Length=2184526
Score = 125 bits (138), Expect = 8e-24
Identities = 340/514 (66%), Gaps = 11/514 (2%)
Strand=Plus/Plus
Query 123348 CCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATAAC 123407
||||||| |||||||| |||||||| | || || ||||| | | | |||| | |
Sbjct 252593 CCATCATTTGAAATGGGTTCAATGTCCGATAATGAAACCCTTGGAAAGAAATGATAAAGC 252652
Query 123408 GAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGGAT 123467
||| || ||||| | ||| || ||||| |||||||||||| ||||||||| ||||
Sbjct 252653 AAAATATAGCTGCTATACCAAAATTAGGTGCAAAGAACCAACTGGACTGACCTAGCGGAT 252712
Query 123468 AGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTAAG 123527
| || || || || || || | || | || |||||| || ||| || ||||
Sbjct 252713 AAATT-GAGAG----TACAAAA-ACAACAATTGGACCATAGAATGTGATTGCATTATAAG 252766
Query 123528 GTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCCAA 123587
||| | ||| | || | |||||||| | | |||||||||||| ||| ||
Sbjct 252767 GTCGCAATTGAACAGATTGAGCAAGTTCAAATTGACGTA-CATGAAACCTATTAGTTTAA 252825
Query 123588 AGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAATG 123647
| | ||||| | || ||||| |||| || | || | ||| || | || ||
Sbjct 252826 AAGCGCCATGGAGAGCCACAAAAGTCCACGGATCGCCTAATTG--AC--ATGAGTAAAAT 252881
Query 123648 ATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGGTG 123707
||||||||| ||| | |||| || |||| | | ||| | | | | |||| |
Sbjct 252882 CTCCTTGTGCATCAAGATCCCATAGTAACAACAAAGGATGTGCTAAACTATTAACAGGAG 252941
Query 123708 TGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATGTG 123767
| | ||||| || ||||||||||| ||| || | ||| ||| || | |||| |
Sbjct 252942 TAAAAACTGCGGCGGTTAAGAAGTTACATCCGTCCAAATAGGAACTAGCCAATTCATGAG 253001
Query 123768 TATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGCAC 123827
|||||| ||| || || ||||| || ||| || |||||||| | | | ||| ||||
Sbjct 253002 TATACCGTGAAGTTACAAAGGTTGTACCTGTGAGCCAACCACTTAAAGCGAAATATGCAC 253061
Query 123828 AAGGCAGAAGTAAAAGACCAGACCATCCTATGAA 123861
|||| | || | |||| |||| ||| ||||
Sbjct 253062 AAGGAAAGAGCAGTTGACCGGACCGACCTCTGAA 253095
>seq85
Length=5226098
Score = 125 bits (138), Expect = 8e-24
Identities = 128/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
||||||||||| |||||||| || ||||| | ||||||||||||||||||||| | |||
Sbjct 1123187 GCTAGGTCTAGAGGGAAGTTATGAGCATTACATTCATGCATAACTTCCATACCAAGGTTA 1123246
Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168
|| | || | || |||| ||||||| | | || | | |||||| || |||
Sbjct 1123247 GCACAATTAATAATATCAACCCATGTATTAATTACACGACCTTGACTATCAACTACGGAT 1123306
Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACC 124215
||||| || ||||||||||| | |||||| ||||| |||| ||||||
Sbjct 1123307 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACC 1123353
>seq77
Length=8408033
Score = 114 bits (126), Expect = 1e-20
Identities = 230/341 (67%), Gaps = 0/341 (0%)
Strand=Plus/Minus
Query 124586 TGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCA 124645
||||||| |||||| | ||||| ||| | ||| | || || |||||||| |||
Sbjct 2699035 TGACCAATTGGGTAGATCAAGAAAACAATAATAGCAATTGCAACAGGAGCTGAATATGCA 2698976
Query 124646 ACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTAT 124705
||| ||||||| | ||| |||| | | |||||||||| | ||||||||
Sbjct 2698975 ACAGCAATCCAAGAGCACATACCTAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 2698916
Query 124706 GCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAAC 124765
| | ||||| | |||||| | | | | || ||||||||| || || || |||
Sbjct 2698915 CAAGCTACACCAAGTAAGAAGTGTAGTACAATTAGCTCATAAGGACCGCCGTTGTATAAC 2698856
Query 124766 CATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGAT 124825
||||||||||| | || ||||||| | |||||||| | || | || ||||| ||
Sbjct 2698855 CATTCATCAACTGATGATGCTTCCTACATTGGGTAAATATGCAAACCTATAGCTGAAGAA 2698796
Query 124826 GATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGT 124885
| ||||| || ||||| ||||| || ||||| ||||| | | ||| | | | |||
Sbjct 2698795 GTTGGAATAATGGCACCGGAGATAATATTGTTTCCATAAAGTAGAGATCTGGAAATAGGT 2698736
Query 124886 TCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAA 124926
| | || || || ||||| | ||||| || || || ||
Sbjct 2698735 TTGCGAATACCATCAATATCTATTGGAGGAGCAGCCATGAA 2698695
>seq80
Length=1461076
Score = 111 bits (122), Expect = 2e-19
Identities = 162/227 (71%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| || || |||||||| || || || |||||||| | ||||| ||||||||||||||
Sbjct 1155825 TGAGCAGTACAGATGTTGCTAGTAGCCTTGTCTCTGCGGATATGTTGCTCTCTAGTTTGC 1155884
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| ||| | | ||||| || || || |||| || ||| | ||| || |
Sbjct 1155885 ATTGCCATACGCAGAGCAGGTTTTCCAGAAGAATCAACACTAAC--ACCAATAATCCTTC 1155942
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
| || ||| ||||||| |||| | | || || || |||||||||||||||||||| |
Sbjct 1155943 CTGGCATCATTCTCTTGTACTCTTGAGAAGTAGCCAAAAATGCAGCATGAGGACCTCCAT 1156002
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541
||||||| || | |||||| ||||| ||| ||| ||||||||
Sbjct 1156003 ATCCCATTGGTACACCAAATCTTTGGGCTGAACCCACAACAATATCA 1156049
Score = 102 bits (112), Expect = 9e-17
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220
|||||||| || ||||| |||||||||||| || | |||||||| |||||||||||
Sbjct 1153104 AAATGGTGCCAGGTGTTTCTTTACACCAATAGGGCCCATCCCAGGACCACCACCTCCATG 1153163
Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269
||||||||||||||||| || | || ||||| || ||||| || |||
Sbjct 1153164 AGGAATACAGAATGTCTTGTGGAGGTTGAGATGGCAAACATCAGCTCCA 1153212
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
|||||||||||| || ||||| | ||||| | | || || || | |||||||| ||
Sbjct 1156364 CATTGCCTCTGCAGCAGCAGTCCCCTCATCGAGCAATGAAGCATTCGACATTGGTAACCC 1156423
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| || |||||||| | || || | || | || | || | | || ||||||||
Sbjct 1156424 GGTGAGGTCTGTGATCAATGTCTGAAAGTTAAGCAAGGACTCTAGACGCCCTTGAGATAT 1156483
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
||||||||| || || ||||| ||||||||| |||||||| | | ||| | | |
Sbjct 1156484 CTCAGCTTGGTAAGGCGTGTACTGCGTGTACCAAGCTGGATTCTCCATGATGTTCCTCAG 1156543
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071
|||||| || || || ||| |||||| ||
Sbjct 1156544 TATGACAGGAGGAACAAAGGTGTTATAGTACCC 1156576
>seq134
Length=15115857
Score = 102 bits (112), Expect = 9e-17
Identities = 184/265 (69%), Gaps = 3/265 (1%)
Strand=Plus/Plus
Query 124723 GAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGC 124782
|||||| | || | | || |||||||| | || || |||||||||||||||| |||
Sbjct 3765736 GAAGTGTAGAACAATTAGCTCATAAGGACTGTCGTTGTATAACCATTCATCAACAGATGC 3765795
Query 124783 TGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACC 124842
||||||||| |||| ||| || || | || |||| | | | |||| || || |
Sbjct 3765796 TGCTTCCCATATTGAGTAAAAATGCAAACCTATAGTTGTAGGAGTAGGAATAATGCCATC 3765855
Query 124843 AGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGAT 124902
| | || || ||||||||||| | | ||| || | | || | | ||| || || ||
Sbjct 3765856 ATAAATAATATTGTTACCATAAAGTAGAGATCCAGAAATAGGCTTACAGATACCATCAAT 3765915
Query 124903 ATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACAT-GCTGCTGCTGTGAGTAAGC 124961
||| || ||||| || |||| || |||| || ||| || | |||| || | ||||
Sbjct 3765916 ATCAACTGGAGGAGCAACAATGAAGGCAATAAT-AAATATAGAAGCTG-AGTCAATAAGG 3765973
Query 124962 ATGGAATCATTAGAACACCAAACCA 124986
|| ||||| | ||||||||||||
Sbjct 3765974 TAGGGATCATCAAAACACCAAACCA 3765998
>seq231
Length=1485859
Score = 95.1 bits (104), Expect = 1e-14
Identities = 202/302 (67%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 122903 AATACAAAATTCTCATGCGGTTGGTCAACAGATGACATCCATGCTCTCATGCCTTCATTA 122962
|||| || || ||||| ||||| || || | |||| | || | || | ||| ||
Sbjct 476400 AATATAAGGTTTTCATGAGGTTGATCTTGAGCCGCCATCTAAGCACAAATACTTTCGTTT 476459
Query 122963 AGAAGAATGTTCTTCGTATAGAAAGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCT 123022
| ||||| || || | |||||||| || || || || ||||||||||| | |||||
Sbjct 476460 AAGAGAATATTTTTGATGTAGAAAGTTTCAAATTCAGGATCTTCTGCTGCACAGATCTCC 476519
Query 123023 TGAGATACAAAGTCGTATGCTCTGAGGTTAAGTGCTAGACCTACGATACCTATAGATGAT 123082
|| | || |||| || || | ||||| | || ||||| || | || | ||
Sbjct 476520 TGGCAAACGAAGTTATAGGCACGTAGGTTCAAAGCCAGACCGACCACTCCAAGAGCACTC 476579
Query 123083 GTCCACATACCCATGACAGGAACGAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAA 123142
|||| | ||| | || || || || ||||||| || ||||| | | ||| || |||
Sbjct 476580 ATCCATAAACCGGTTACCGGTACAAATAACATAAACAAATGTAACCAACATTTATTGGAA 476639
Query 123143 AATGCGATACCAAATATCTGTGACCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCT 123202
|| || | ||||| || || ||||| || | || || || | ||| ||| ||||||
Sbjct 476640 AAAGCAACCCCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAGGTTTCT 476699
Query 123203 TC 123204
||
Sbjct 476700 TC 476701
>seq31544
Length=164
Score = 82.4 bits (90), Expect = 9e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099
||| ||| ||||||||||| |||||||| || ||||| | |||||||||||||||||||
Sbjct 132 TCAACAGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 73
Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGT 124134
|| | || || | || | || |||| |||| ||
Sbjct 72 CCAAGATTAGCACGATTAATAATATCAGCCCAGGT 38
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578735129427520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |