Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq444 666 0.0
seq10427 596 2e-165
seq32303 379 2e-100
seq31551 300 2e-76
seq31730 244 1e-59
seq231 208 9e-49
seq111 208 9e-49
seq34854 194 2e-44
seq328 194 2e-44
seq31523 192 7e-44
seq77 159 4e-34
seq203 138 1e-27
seq134 120 3e-22
seq85 107 2e-18
seq31544 93.3 5e-14
seq4929 91.5 2e-13
seq31311 89.7 6e-13
seq13264 87.8 2e-12
seq151 86.0 7e-12
>seq444
Length=4271
Score = 666 bits (738), Expect = 0.0
Identities = 748/995 (75%), Gaps = 4/995 (0%)
Strand=Plus/Plus
Query 67833 CTCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCAT 67892
|||| ||||||| ||||| |||||||||||||| || ||||| |||||||||||||||||
Sbjct 122 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 181
Query 67893 ACCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATC 67952
||| | ||| ||||| | || || ||||| ||| | ||| || ||||||
Sbjct 182 ACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATC 241
Query 67953 AAGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAG 68012
|| | || |||||||| ||||||||||| |||||||| ||||| || |||| ||| |
Sbjct 242 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAA 301
Query 68013 TGCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGA 68072
||||| ||||| ||||| || || ||||| || || | |||||| || | ||||| ||
Sbjct 302 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 361
Query 68073 GTTGTTGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAAT 68132
|||||||| ||||| ||||| |||| || || || || || || ||||| |||||
Sbjct 362 ATTGTTGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 421
Query 68133 GTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGT 68192
||||||||| ||||||||||| ||||| ||||||| | || || ||| |||| ||
Sbjct 422 GTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 481
Query 68193 GGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCC 68252
|||||| | | || |||||| |||| |||||||||||| ||||| || || || ||
Sbjct 482 GGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAGGGAGCC 541
Query 68253 ACCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGC 68312
|| ||||| ||||| || || | ||| || || |||||||| || ||||||||||| ||
Sbjct 542 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGC 601
Query 68313 TTGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAA 68372
||||| || | ||| |||||||||||||||| || || |||||||| | ||||| ||
Sbjct 602 CTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAA 661
Query 68373 CGAACCTTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGA 68432
|| ||||| | ||||||| || ||| || || | || ||||||||||| || ||
Sbjct 662 ACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGA 721
Query 68433 GTATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCC 68492
||||||||| ||||||||||||||||| ||||| | ||||||||| ||||| ||
Sbjct 722 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 781
Query 68493 CATGTATGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATT 68552
||| || | | ||||| | ||||| | | | |||| ||||||| || ||
Sbjct 782 CATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTT 841
Query 68553 GTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGC 68612
||| | ||| ||||||| || ||| |||||||| || || ||||| || | ||||| ||
Sbjct 842 GTATAGCCATTCATCAACGGATGCAGCTTCCCAGATTGGGTAAAAATGCAATCCAATAGC 901
Query 68613 ATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGC 68672
||| |||||| || ||||| ||||| || ||||| || || ||||| || ||||
Sbjct 902 TGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGA 961
Query 68673 AACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGAT-GA 68731
||||||||||||||||||||| || || || || |||||||| ||||| |||| || |
Sbjct 962 AACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAA 1021
Query 68732 AACAGATGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAA 68790
|||||| ||||| | ||| || ||||||||||||| || || ||||| |||| ||||
Sbjct 1022 AACAGA-AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAACCATCCAATGTAA 1079
Query 68791 AGGCGGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825
|| ||||| || ||| ||| | ||| | |||||
Sbjct 1080 AGACGGTTTTCAGTGCTAGTTATCCAGTTACAGAA 1114
>seq10427
Length=4047
Score = 596 bits (660), Expect = 2e-165
Identities = 738/1007 (73%), Gaps = 2/1007 (0%)
Strand=Plus/Minus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| || || ||||| || ||||| || || ||||||| || ||||||||| || |
Sbjct 1793 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 1734
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705
|||| || |||| ||| ||||||| |||||| || || ||||| || || || ||||
Sbjct 1733 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGA 1674
Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765
| ||||| || ||||| ||||| ||||| | ||| || ||||| || |||||||| ||||
Sbjct 1673 AAGTCTCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 1614
Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825
| ||||| | ||| | ||| | | || | | ||| |||| | ||| | || || |
Sbjct 1613 GTAGGTTCAAAGCTAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTA 1554
Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885
|||| |||||||||||||| ||||| | |||||| ||| |||| |||||||| || |
Sbjct 1553 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTG 1494
Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945
|||| |||||||| || || |||||||| ||||||||||| ||||||| | || || |
Sbjct 1493 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAG 1434
Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005
| ||| || ||||| |||||||||||| | | |||||| ||||| ||| ||||||
Sbjct 1433 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCAT 1374
Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065
|||| || | |||| || | ||||| | ||| || || |||||||||||||| ||||
Sbjct 1373 GAATAGCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGT 1314
Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125
|||| ||||| ||||| || ||||| | ||||| | ||||||||| || || | || |
Sbjct 1313 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 1254
Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185
| ||| || || || ||||||| |||||||| || || || || || |||||| ||
Sbjct 1253 CAAAACTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAA 1194
Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA- 67244
|||||||||| || ||||||||||| || || ||||| || || || | | || |||
Sbjct 1193 CAAAAACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGAT 1135
Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304
|| || |||||||| || || | ||| ||||| |||| |||||||| |||||||| ||
Sbjct 1134 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCA 1075
Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364
|||||| ||| || || || | ||| ||| || ||||| || || | ||||||
Sbjct 1074 ACAAAAGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 1015
Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424
||||| |||| | | |||||| | | | || |||||| || || || || || ||
Sbjct 1014 CCCCACAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTT 955
Query 67425 AGAAAATTAGCACCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACA 67484
| |||||| ||| || | ||| | || | ||| ||||| ||||| || |||
Sbjct 954 AAAAAATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACA 895
Query 67485 AACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAGT 67544
|| || ||||| || | ||| || || | || | ||| ||| ||||| || | |||
Sbjct 894 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGA 835
Query 67545 CCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591
||||||||||| ||||| || ||||| || | | |||||||||
Sbjct 834 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATC 788
>seq32303
Length=834
Score = 379 bits (420), Expect = 2e-100
Identities = 520/721 (72%), Gaps = 4/721 (1%)
Strand=Plus/Plus
Query 66873 CCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGA 66932
|||||||| || ||||| ||||| || || || |||||||| ||||||||||| |||||
Sbjct 6 CCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGA 65
Query 66933 GTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCT 66992
|| | || || || ||| || ||||| |||||||||||| | | |||||| |||
Sbjct 66 GTTGGGTTAAAAGCACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCT 125
Query 66993 ACTGTAACACCATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATC 67052
|| ||| |||||||||| || | || | ||| | |||| | ||| || || ||||||
Sbjct 126 ACGGTAGCACCATGAATAGCGCATAGGAGAGCAGCGCCCAATACACCGGCAACTCCCATC 185
Query 67053 ATATGAAACGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAG 67112
|||||||| |||||||| ||||| ||||| || ||||| | || || | ||| |||||
Sbjct 186 ATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAAGCGAAAT 245
Query 67113 ATTGCTGAGACCCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATG 67172
|| |||| || || ||| || || || ||||||| || ||||| || || || ||
Sbjct 246 ATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAATC 305
Query 67173 AGAAAGACACTAACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGG 67232
|| || ||| |||||||||||| || |||||||| || || || ||||| || || ||
Sbjct 306 AGGAATACAGAAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATTATAAGGTCGC 365
Query 67233 ATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGC 67291
| | || ||| || || |||||||| || || | ||||||||| ||||| |||||||
Sbjct 366 A-ATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGC 424
Query 67292 CCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCC 67351
|||||||| ||||||||| |||| || || || | |||| ||| || ||||| ||
Sbjct 425 GCCGTGGAGAGCCACAAAAGTCCACAGACCACCTAATTGGCACCAACGAGTAAAATCTCC 484
Query 67352 CTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGA 67411
|| | ||||||||||| |||| | | |||||| | | | || |||||| || ||
Sbjct 485 TTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTAGA 544
Query 67412 CACAGCCGCTGTGAGAAAATTAGCA-CCCTCAAGATAACTAGACGCGAGTCCGTGAGTGT 67470
|| || || || | | || | ||| || || | ||| | || | ||| || || |
Sbjct 545 AACTGCGGCAGTTA-AGAAGTTGCATCCTTCCAAATAGGAACTGGCCAATCCATGGGTAT 603
Query 67471 ACCAGCTTGTGACAAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGG 67530
|||| || ||||| || ||||| || | ||| ||||| | || | ||| ||| |
Sbjct 604 ACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCACCTAAGGCGAAATAGGCACAAG 663
Query 67531 GAAAAAGAAGTAGTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCAT 67590
|||| || | ||| || |||||||| ||||| || || || |||| | ||||||||
Sbjct 664 GAAAGAGCAATAGACCGGACCAACCTACAAAAACGAAACGGTCTCTACGTAACCAGTCAT 723
Query 67591 C 67591
|
Sbjct 724 C 724
>seq31551
Length=1713
Score = 300 bits (332), Expect = 2e-76
Identities = 327/432 (76%), Gaps = 8/432 (2%)
Strand=Plus/Plus
Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893
||| ||||||| ||||| || |||||||| || || ||||| ||||||||||||||||||
Sbjct 719 TCAACAGCAGCTAGGTCTAGGGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 778
Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCA------GAACCTTACCAGAA 67947
|| | ||| ||||| | | || ||||||||| | || | || || |
Sbjct 779 CCAAGGTTAGCACGGTTAATGAGATCAGCCCAGGTATTAATTACATGACCTTTTCCTTGA 838
Query 67948 CTATCAAGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACA 68007
||||||| | ||| |||||||| |||||||| || | || || ||||||||||||| |
Sbjct 839 CTATCAACTACAGATTGGTTGAAATTGAAACCGTTTAAGTGAAAAGCCATGGTGCTAATA 898
Query 68008 CCAAGTGCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAA 68067
|| | ||||||||||||||||| || |||||||| ||||| |||||||| || | |||
Sbjct 899 CCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAGGAA 958
Query 68068 CGGGAGTTGTTGA-ACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGC 68126
|| || ||||||| || | ||||| |||||||||| || || || || ||||| |||||
Sbjct 959 CGAGAATTGTTGACACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 1017
Query 68127 AACAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGT 68186
|| || || ||||| ||||||||||||||||| ||||||| || || ||| |
Sbjct 1018 TACGATATTATAAGTTTCTTCTTCTTGACCGAATCTGTAACCTACATTAGCAGATTCATT 1077
Query 68187 TTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAG 68246
||| |||||||| | | || ||| || |||| |||||||||||| |||||||| ||
Sbjct 1078 TTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAG 1137
Query 68247 AGATCCACCAAA 68258
||| || || ||
Sbjct 1138 AGAGCCGCCGAA 1149
>seq31730
Length=297
Score = 244 bits (270), Expect = 1e-59
Identities = 225/285 (79%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 68211 AGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACGCCAGCAAC 68270
||| || |||| |||||||||||| |||||||| || || || || ||||| ||||| ||
Sbjct 285 AGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTAC 226
Query 68271 GCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCATGTA 68330
||| | ||| || || |||||||| |||||||||||||| || ||||| || | |||| |
Sbjct 225 GCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAA 166
Query 68331 GTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAAGG 68390
|||||||||||||||||| || |||||||| | ||||| || |||||||| | ||
Sbjct 165 GTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCAATTGG 106
Query 68391 ATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCCA 68450
|||| || ||| || || | || ||||||||||| || || ||||||||| |||||
Sbjct 105 GTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCA 46
Query 68451 AGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCAT 68495
||| |||||||| ||||| | ||||||||| ||||| |||||
Sbjct 45 AGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 1
>seq231
Length=1485859
Score = 208 bits (230), Expect = 9e-49
Identities = 241/325 (74%), Gaps = 0/325 (0%)
Strand=Plus/Plus
Query 66610 GAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTTGATCGATAGGTGCCAACCATGCAC 66669
|||| || || | |||| || ||||||||| |||||||| || |||| | | ||||
Sbjct 476386 GAACCTCCTCAAGAAATATAAGGTTTTCATGAGGTTGATCTTGAGCCGCCATCTAAGCAC 476445
Query 66670 GAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGAACGTCTCGAACTCTGGGTCTTCTG 66729
|| || ||| || || ||||| || || ||||||| || || || || || |||||||
Sbjct 476446 AAATACTTTCGTTTAAGAGAATATTTTTGATGTAGAAAGTTTCAAATTCAGGATCTTCTG 476505
Query 66730 CTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAA 66789
|||| | |||||| ||| | || |||| ||| ||||| ||||| | ||| ||||| | |
Sbjct 476506 CTGCACAGATCTCCTGGCAAACGAAGTTATAGGCACGTAGGTTCAAAGCCAGACCGACCA 476565
Query 66790 TACCGATGGAACTTGTCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACC 66849
|| | | ||| |||| | ||| | || || ||||| |||||||| ||||| ||||
Sbjct 476566 CTCCAAGAGCACTCATCCATAAACCGGTTACCGGTACAAATAACATAAACAAATGTAACC 476625
Query 66850 ACCTCTTATTGCTAAACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCA 66909
| | |||||| ||| |||| |||||||| || ||||| ||||| || || || ||||
Sbjct 476626 AACATTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCA 476685
Query 66910 TTGAGTAAGTTTCTTCCTCTTGAGT 66934
|||| || |||||||| |||||||
Sbjct 476686 TTGAATAGGTTTCTTCAGCTTGAGT 476710
>seq111
Length=3019079
Score = 208 bits (230), Expect = 9e-49
Identities = 217/285 (76%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| | || |||||||| ||||| || || ||||||| || ||||||||| || |
Sbjct 6515 ATTAAAGAGGGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 6574
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705
|||| || |||| ||| ||||||| |||||| || || ||||| || || |||||||
Sbjct 6575 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 6634
Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765
| || || || || || ||||| ||||| | |||||| ||||| || |||||||| ||||
Sbjct 6635 AAGTTTCAAATTCAGGATCTTCCGCTGCACGGATCTCCTGGGAAACGAAGTCATAGGCAC 6694
Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825
| ||||| ||||| ||||| | | || | | ||| |||| | ||| | || || |
Sbjct 6695 GTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 6754
Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAA 66870
|||| |||||||||||||| ||||| | |||||| ||| ||||
Sbjct 6755 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAA 6799
>seq34854
Length=328
Score = 194 bits (214), Expect = 2e-44
Identities = 207/268 (77%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599
||||||| || ||||| ||||| ||||||| | ||| |||||||| || || ||||| |
Sbjct 317 AAGGACCGCCGTTGTATAACCATTCATCAACAGATGCCGCTTCCCATATTGGGTAAAAAT 258
Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659
| | ||| || || ||| |||||| || ||||| || || || ||||| ||||| |
Sbjct 257 GCAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCCGAGATAATATTGTTTCCATAAA 198
Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719
| || || |||| ||||||||||||||||||||| || || || || |||||||| ||||
Sbjct 197 GTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGA 138
Query 68720 AGGCGACGATGAA-ACAGATGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAA 68777
|||| | || || ||||| ||||| | ||| || ||||||||||||| || || ||
Sbjct 137 AGGCAATAATAAATACAGA-AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAA 80
Query 68778 CCAACCAACGTAAAGGCGGTTCTCTGTG 68805
||| |||| |||||| ||||| || |||
Sbjct 79 CCATCCAATGTAAAGACGGTTTTCGGTG 52
>seq328
Length=921196
Score = 194 bits (214), Expect = 2e-44
Identities = 209/277 (75%), Gaps = 0/277 (0%)
Strand=Plus/Plus
Query 66628 CAAAGTTTTCATGCGGTTGATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATA 66687
||| ||||||||| || ||||| || |||| ||| ||||||| ||||| || || |
Sbjct 671393 CAAGGTTTTCATGAGGCTGATCTTGAGCCGCCATCCAAGCACGAATACCTTTGTTTAAGA 671452
Query 66688 GAATGTTCTTTGTGTAGAACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGG 66747
|||| || || |||||||| || || || || || ||||| ||||| | |||||| ||||
Sbjct 671453 GAATATTTTTGGTGTAGAAAGTTTCAAATTCAGGATCTTCCGCTGCACGGATCTCCTGGG 671512
Query 66748 ATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCC 66807
| || |||||||| ||||| ||||| ||||| ||||| | | || | | ||| |||
Sbjct 671513 AAACGAAGTCATAGGCACGTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCC 671572
Query 66808 AAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACG 66867
| | ||| | || || ||||| |||||||||||||| ||||| | |||||| ||| |
Sbjct 671573 ATAAACCGGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAG 671632
Query 66868 CAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGT 66904
||| |||||||| || ||||| ||||| || || ||
Sbjct 671633 CAACCCCAAAGATTTGGGACCAAAAGCGATTAGCGGT 671669
>seq31523
Length=225
Score = 192 bits (212), Expect = 7e-44
Identities = 163/201 (81%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 67968 GAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGAT 68027
||| ||||||||||| |||||||| ||||| ||||| | ||| | ||||||||||||||
Sbjct 225 GAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAACCAGAT 166
Query 68028 ACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGC 68087
||| || |||||||| ||||| ||||||||||| | ||||| || |||||||| ||
Sbjct 165 ACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTAGC 106
Query 68088 ATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTC 68147
||| |||||||||| || || || || ||||| ||||| || || || ||||| |||||
Sbjct 105 ATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTC 46
Query 68148 TTCTTGACCGAACTTGTAACC 68168
||||||||||| |||||||
Sbjct 45 CTCTTGACCGAATCTGTAACC 25
>seq77
Length=8408033
Score = 159 bits (176), Expect = 4e-34
Identities = 217/303 (72%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 68418 TGCAACAGGTGCAGAGTATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAG 68477
||||||||| || || ||||||||| ||||||| | |||||| |||||| | |||
Sbjct 2698997 TGCAACAGGAGCTGAATATGCAACAGCAATCCAAGAGCACATACCTAGACGAAAACTAAG 2698938
Query 68478 TTCCCATTCACGTCCCATGTATGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTG 68537
|||||| ||||| |||||||| | | ||||| | |||||| | | | || |
Sbjct 2698937 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGTACAATTAGCTC 2698878
Query 68538 GAAAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAA 68597
||||||| || ||||| ||||| ||||||| | || ||||||| | || || ||||
Sbjct 2698877 ATAAGGACCGCCGTTGTATAACCATTCATCAACTGATGATGCTTCCTACATTGGGTAAAT 2698818
Query 68598 GTGAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATA 68657
|| | ||| || || ||| | |||| || ||||| || || || ||||| |||||
Sbjct 2698817 ATGCAAACCTATAGCTGAAGAAGTTGGAATAATGGCACCGGAGATAATATTGTTTCCATA 2698758
Query 68658 CAGAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGAT 68717
|| || || | | || ||||| ||||||||||| || || | || |||||||| ||
Sbjct 2698757 AAGTAGAGATCTGGAAATAGGTTTGCGAATACCATCAATATCTATTGGAGGAGCAGCCAT 2698698
Query 68718 GAA 68720
|||
Sbjct 2698697 GAA 2698695
>seq203
Length=8626763
Score = 138 bits (152), Expect = 1e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 68280 ATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCATGTAGTTGAAAGT 68339
||| || || | ||| |||||||||||||| |||||||| || | |||| | |||||||
Sbjct 3756300 ATGCAATGGATACATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAATTGAAAGC 3756359
Query 68340 ACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAAGGATAGACCAG 68399
|| ||||| || |||||||| | ||| | || |||||||| | || |||| ||
Sbjct 3756360 ACTGGAAATTCCTAGAGGCATATCATCATAAAATCTTCCTTGACCAATTGGGTAGATCAA 3756419
Query 68400 GAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCCAAGGACGCAT 68459
||| || || | || | |||||| || || || ||||||||| |||||||| |||||
Sbjct 3756420 GAAAACAGCAGTAGCAGTTGCAACCGGAGCTGAATATGCAACAACAATCCAAGGGCGCAT 3756479
Query 68460 ACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTA 68498
||| ||||| | ||||||| | ||| ||||||||
Sbjct 3756480 ACCTAGACGGAAACTAAGTTCCTACTCATAACCCATGTA 3756518
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/186 (72%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 68130 AATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTC 68189
||| || |||| ||||| ||||||||||| |||||||| | || ||| ||| ||||
Sbjct 3392022 AATATTTTAAGCTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGTGGATTCATTTTC 3392081
Query 68190 AGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAAC-AGAG 68248
| ||||| | || || ||| || |||| ||| ||||||| | ||||| |||
Sbjct 3392082 TATAGTTTCCCTAATCAAACTAGAGGTTACCAAAGAAGCATGCATAAAATTGAACGAGA- 3392140
Query 68249 ATCCACCAAATACGCCAGC-AACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGC 68307
| || |||||||| ||| | | | | || ||| || || |||||| || |||||||||
Sbjct 3392141 AGCCCCCAAATACACCAACTATCTCTGA-CATGTGAAATAAGTGCATAAGAATGTTGTGC 3392199
Query 68308 TCTGCT 68313
||| ||
Sbjct 3392200 TCTACT 3392205
>seq134
Length=15115857
Score = 120 bits (132), Expect = 3e-22
Identities = 174/242 (72%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599
|||||| | ||||| ||||| ||||||| | |||||||||||| || | ||||| |
Sbjct 3765759 AAGGACTGTCGTTGTATAACCATTCATCAACAGATGCTGCTTCCCATATTGAGTAAAAAT 3765818
Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659
| | ||| || | | | | |||||| || || || |||| || ||||||||||| |
Sbjct 3765819 GCAAACCTATAGTTGTAGGAGTAGGAATAATGCCATCATAAATAATATTGTTACCATAAA 3765878
Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719
| || || |||| || ||| | || |||||||| || || || || |||||| | ||||
Sbjct 3765879 GTAGAGATCCAGAAATAGGCTTACAGATACCATCAATATCAACTGGAGGAGCAACAATGA 3765938
Query 68720 AGGCGACGATGAA-ACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAAC 68778
|||| | || || | ||| | || ||| || ||||||||||||| || || |||
Sbjct 3765939 AGGCAATAATAAATATAGA-AGCTGAGTCAATAAG-GTAGGGATCATCAAAACACCAAAC 3765996
Query 68779 CA 68780
||
Sbjct 3765997 CA 3765998
>seq85
Length=5226098
Score = 107 bits (118), Expect = 2e-18
Identities = 127/172 (74%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898
|| ||| ||||| ||||||||||| || || |||| |||||||||||||||||||| |
Sbjct 1123183 AGTAGCTAGGTCTAGAGGGAAGTTATGAGCATTACATTCATGCATAACTTCCATACCAAG 1123242
Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958
||| | || | || || |||| ||| | || ||| |||||||| |
Sbjct 1123243 GTTAGCACAATTAATAATATCAACCCATGTATTAATTACACGACCTTGACTATCAACTAC 1123302
Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCA 68010
|| |||||||| ||||||||||| |||||||| ||||| ||||| | ||||
Sbjct 1123303 GGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCA 1123354
>seq31544
Length=164
Score = 93.3 bits (102), Expect = 5e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893
||| ||||||| ||||| ||||||||||| || || ||||| ||||||||||||||||||
Sbjct 132 TCAACAGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 73
Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTA 67929
|| | | ||| || || | || || |||||||||
Sbjct 72 CCAAGATTAGCACGATTAATAATATCAGCCCAGGTA 37
>seq4929
Length=4131
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560
||||| || ||||||| |||||||| |||||||||||||||| ||||||| ||| ||
Sbjct 2590 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGC 2533
Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582
||| || |||||||||||||||
Sbjct 2532 TCTACCACTGAGCTACTGAGGA 2511
>seq31311
Length=6542
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570
||||||| |||||||||||||||||||||| || ||||||| ||| ||||| || |||
Sbjct 6219 CTCCCCAAGTAGGATTTGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 6160
Query 35571 AGCTACTGAGGA 35582
||||||||||||
Sbjct 6159 AGCTACTGAGGA 6148
>seq13264
Length=259
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560
||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| ||
Sbjct 142 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 85
Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582
||| || |||||||||||||||
Sbjct 84 TCTACCACTGAGCTACTGAGGA 63
>seq151
Length=2833985
Score = 86.0 bits (94), Expect = 7e-12
Identities = 86/111 (77%), Gaps = 2/111 (2%)
Strand=Plus/Minus
Query 68044 GCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGCATACTGGAAGATCAGA 68103
||||| ||||||||||| | |||||| || |||||||| ||||| |||||||||
Sbjct 2328121 GCAGCTAGGAAGAAGTGTAACGAACGAGAATTGTTGAAACTAGCATATAGGAAGATCAAT 2328062
Query 68104 CGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGA 68154
|| || || || ||||| ||||| || || || ||||| ||||| |||||
Sbjct 2328061 CGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTC--CTTGA 2328013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571794286864320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |