Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq22 143 2e-29
seq203 134 9e-27
seq8789 127 1e-24
seq49 127 1e-24
seq652 125 5e-24
seq116 123 2e-23
seq569 122 6e-23
seq87 122 6e-23
seq12 122 6e-23
seq32873 89.7 3e-13
seq91 86.0 4e-12
>seq22
Length=3960921
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| | ||| || || ||||| | |||| ||||||||| ||||| ||||| |
Sbjct 263339 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 263398
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | ||| | || ||||| ||||| |||||||||||||| || |||||||| | ||
Sbjct 263399 AGCGTTCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 263458
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||||||| | || || |||||| | || | || | ||| ||
Sbjct 263459 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 263518
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || ||||||||||| || |||||||||||
Sbjct 263519 TCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCAT 263565
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| | |||||| |||||||| | ||| ||||||||| ||||| ||||| |
Sbjct 262655 CCTCCCCTGAGCCTCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 262714
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || |||||||||||||||||||| | |||||||| | ||
Sbjct 262715 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 262774
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || |||||| | || | || | ||| ||
Sbjct 262775 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 262834
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || | |||||| || |||||||||||
Sbjct 262835 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 262881
Score = 129 bits (142), Expect = 4e-25
Identities = 160/217 (74%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| ||||||||| ||||| || |||| ||| |||| | ||
Sbjct 262442 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCGTCC 262501
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| | ||||||||| | || | || ||||||||
Sbjct 262502 TCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCC 262561
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | |||||| || | ||| ||
Sbjct 262562 TGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGAT 262617
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||||| || ||||||||||| |||||||||||||||
Sbjct 262618 GGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 262654
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||||||||| | ||| | || | ||
Sbjct 263126 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCGGCGAGGGTACGGCCGTCC 263185
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| | || | ||||||||||||
Sbjct 263186 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTGTCC 263245
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | ||| || || | ||| ||||||
Sbjct 263246 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTC 263305
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||||||||| || ||||||||||||
Sbjct 263306 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 263338
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||| ||||| | ||| | || | ||
Sbjct 262898 AGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCC 262957
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| |||||||| || || |||||||| | || | ||||||||||||
Sbjct 262958 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCCTCCTTGTCC 263017
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | ||| ||||||
Sbjct 263018 TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTC 263077
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| || |||||||||||
Sbjct 263078 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 263109
>seq203
Length=8626763
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || ||||||||||||||| ||||| | ||| | | | ||||
Sbjct 5731053 AGCACCAGGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTCCCATCC 5730994
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||||| || ||||| | || | ||||||||||||
Sbjct 5730993 TCCAGCTGCTTACCGGCGAAGATCAGTCTCTGTTGGTCCGGTGGGATCCCCTCCTTGTCT 5730934
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| || || | |||| || | |||||| || | ||| |||||
Sbjct 5730933 TGGATCTTTGCCTTAACATTATCAATCGTGTCCGAGCTCTCGACCTCCAAGGTGATGGTT 5730874
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| |||||||| ||||| ||||||||
Sbjct 5730873 TTTCCCGTCAGGGTCTTGACAAAAATCTGCAT 5730842
Score = 109 bits (120), Expect = 4e-19
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| | | || |||| ||| | ||| |||||||||||||||||| || |
Sbjct 5730156 CCTCCCCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 5730097
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | | || |||| || || ||||| || || ||||| || | |||||||| | ||
Sbjct 5730096 AAGGTTCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 5730037
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926
| ||| |||||||| | |||||| ||| || || ||||||| || | ||
Sbjct 5730036 ATCCCTTCCTTGTCTTGAATTTTTGCTTTTAC--AT--TATCGATTGTGTCGGAGCTTTC 5729981
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||| ||| || ||||| ||||| ||||| || |||||||| |||||
Sbjct 5729980 CACCTCAAGGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCAT 5729930
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||| ||| | || |||| ||| | ||| || ||||| ||||| |||||||
Sbjct 5730384 CCACCCCGCAAACGGAGCACCAAGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCCGCA 5730325
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | |||| || || |||||||| || || || || | |||||||| | ||
Sbjct 5730324 AGCGTCCTGCCATCTTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCCGGTGGA 5730265
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || ||||| | || | ||| | ||| ||
Sbjct 5730264 ATACCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 5730205
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| || ||||| || ||||||||||| |||||||| ||||||
Sbjct 5730204 TCTAGGGTAATTGTCTTCCCAGTGAGGGTCTTCACAAAGATTTGCATG 5730157
>seq8789
Length=1270
Score = 127 bits (140), Expect = 1e-24
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||| | ||| || || ||||| | |||| ||||||||| ||||| ||||| |
Sbjct 601 CCTCCCCTGAGCCTAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 660
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| | || || || ||||| ||||||||||||| | |||||||| ||||
Sbjct 661 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAATGCTGCTGGTCCGGCGGT 720
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG---CCTCG 34927
| |||||||||||| | || || ||||| | || | | | |||| |||
Sbjct 721 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GTTGTGAATGGT--GTTGGAGCTCTCC 777
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | ||| |||||||| || ||||||||||| || |||||||||||
Sbjct 778 ACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAGATCTGCAT 827
>seq49
Length=4798478
Score = 127 bits (140), Expect = 1e-24
Identities = 171/234 (73%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| ||||| | ||||||| ||||| |||| ||||| || ||||| |||||||
Sbjct 2869914 TTCCTCCTCTCAAACGGAGGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCCG 2869855
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
||| | || |||| || ||||||||||| || || |||| || ||||||||| | |
Sbjct 2869854 CTAGTGTCCGGCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCGCTGCTGGTCTGGGG 2869795
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGG---CC 34924
| | ||| || ||||| | ||||| || || || | || || || || |
Sbjct 2869794 GAATCCCTTCTTTGTCCTGGATTTTGGCCTTCAC--AT--TGTCAATGGTATCGGAACTC 2869739
Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || |||| || |||||||| || ||||| ||||| |||||||||||||||
Sbjct 2869738 TCCACCTCAAGAGTAATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATG 2869685
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| || | |||| |||||||| |||||||| || | ||| |||| ||||
Sbjct 2840613 AGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAGGGTGCGACCATCC 2840554
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || | ||||||||| | || | |||||||| ||
Sbjct 2840553 TCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTATCT 2840494
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| ||| | || || || | ||| ||||||
Sbjct 2840493 TGAATCTTGGCCTTGACATTATCAATCGTGTCAGAGCTTTCAACCTCGAGGGTAATGGTC 2840434
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||||||||| |||||||||||||||
Sbjct 2840433 TTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2840401
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| |||| |||| ||||| || ||||| || || | ||| ||||| ||||
Sbjct 2846191 AGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCCAGGGTGCGCCCATCC 2846132
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || | |||||||| | || | ||||| |||||
Sbjct 2846131 TCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCTTTGTCT 2846072
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || | || || || | ||| ||||||
Sbjct 2846071 TGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACCTCGAGGGTAATGGTC 2846012
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||||||||| |||||||||||||||
Sbjct 2846011 TTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2845979
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| || || | || | || |||| | |||||||| || || ||
Sbjct 2847265 CTCCTTTTGAATGTTGTAATCGGCCAGTGTCCGGCCATCCCCGAGTTGCTTCCCTGCAAA 2847206
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| || ||||||||| | || | ||||||||||| | ||| || ||||||
Sbjct 2847205 AATCAACCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGTATCTTCGCTTTGACATT 2847146
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || | ||| || || | ||| || ||||| || || || ||||| ||
Sbjct 2847145 ATCAATCGTGTCCGAGCTCTCAACTTCCAAGGTGATAGTCTTGCCAGTCAGAGTCTTCAC 2847086
Query 34966 AAAGATCTGCATG 34978
||| | |||||||
Sbjct 2847085 AAAAACCTGCATG 2847073
>seq652
Length=2384379
Score = 125 bits (138), Expect = 5e-24
Identities = 170/236 (72%), Gaps = 12/236 (5%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||||||||||| | || |||| ||||| |||| ||||| |||||||| ||||| |
Sbjct 465058 TTCCTCCCCTCAGACGGAGCACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCTG 464999
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
|| | | |||| || |||||||| || || || |||| | ||||||||| | |
Sbjct 464998 CGAGCGTCCTGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGG 464939
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCC---- 34924
| | ||||||||||| | ||||| || || | ||||||| | || ||
Sbjct 464938 GGATTCCCTCCTTGTCCTGGATTTTCGCCTTCAC----GTTATCGAT--AGTGTCCGAAC 464885
Query 34925 --TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || | |||||||||||| || ||||||||||| |||||||| ||||||
Sbjct 464884 TTTCGACCTCGAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACAAAGATTTGCATG 464829
Score = 86.0 bits (94), Expect = 4e-12
Identities = 138/195 (71%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| || ||||| || |||| || | || |||| || || ||||| || || ||
Sbjct 465477 CTCCTTTTGGATGTTGTAATCCGCCAGTGTCCGGCCATCCTCGAGCTGCTTCCCAGCAAA 465418
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| | ||||| ||| | || | || |||||||| | ||| || |||||| |
Sbjct 465417 AATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGTATCTTAGCTTTGAC--A 465360
Query 34906 TGCT-ATCGAT-TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| | | || | || | |||||| || | ||||||||||| || || ||||||||
Sbjct 465359 TTATCAACGGTATCCGAGCTCTCGACTTCCAAAGTTATGGTCTTCCCGGTAAGGGTCTTG 465300
Query 34964 ACAAAGATCTGCATG 34978
||||| |||||||||
Sbjct 465299 ACAAATATCTGCATG 465285
>seq116
Length=10441785
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | | ||||||||| ||||| | ||| ||||||||| ||||| || || |
Sbjct 4711844 CCTCCGCGGAGCCTCAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCG 4711903
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | | | || || || |||||||||||||||||||| || ||||| || ||||
Sbjct 4711904 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 4711963
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || |||||| | |||| || | ||||||
Sbjct 4711964 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATCGTGTCCGAGCTCTCGACC 4712023
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || ||||| || || || |||||||| || ||||||||||||
Sbjct 4712024 TCGAGCGTGATGGTTTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 4712071
Score = 118 bits (130), Expect = 7e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | | ||||||||| ||||| | || ||| ||||| ||||| || || |
Sbjct 4726743 CCTCCGCGGAGCCTCAGGACGAGGTGGAGCGTCGACTCTTTCTGGATGTTGTAATCGGCG 4726684
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | | | || || || |||||||||||||||||||| || ||||| || ||||
Sbjct 4726683 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 4726624
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | ||||| |||||| | |||| || | ||||||
Sbjct 4726623 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACC 4726564
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || |||||||| || || |||||||| || ||||||||||||
Sbjct 4726563 TCGAGCGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATG 4726516
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | | |||||| || ||||| | || ||||||||| || || || || |
Sbjct 4726515 CCTCCACGGAGCCTCAGAACGAGGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 4726456
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | | | || || || |||||||| ||||||||||| || ||||| || ||||
Sbjct 4726455 AGGGTCCTACCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCCGGCGGG 4726396
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | ||||| |||||| | |||| || | ||||||
Sbjct 4726395 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACC 4726336
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || |||||||| || || |||||||| || ||||||||||||
Sbjct 4726335 TCGAGCGTGATGGTCTTCCCGGTCAGGGTCTTGACGAAGATCTGCATG 4726288
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | | ||| || || ||||||| ||| ||||||||| ||||| ||||| |
Sbjct 4712300 CCTCCACGGAGCCTGAGCACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4712359
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | || | || || || ||||| ||||||||||| || || ||||| || | ||
Sbjct 4712360 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 4712419
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || |||||| | || | || | ||||||
Sbjct 4712420 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACC 4712479
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || || |||||||| || |||||||||||
Sbjct 4712480 TCGAGCGTGATGGTCTTCCCGGTCAGGGTCTTGACGAAGATCTGCAT 4712526
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | | ||| || || ||||||| ||| ||||||||| ||||| ||||| |
Sbjct 4726287 CCTCCGCGGAGCCTGAGCACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4726228
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | || | || || || ||||| ||||||||||| || || |||||||| | ||
Sbjct 4726227 AGGGTACGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 4726168
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | ||| || |||||| | || | || | ||||||
Sbjct 4726167 ATGCCTTCCTTGTCCTGTATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACC 4726108
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || | |||||| || || |||||||| || |||||||||||
Sbjct 4726107 TCGAGCGTGACGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4726061
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| || || || || | ||| |||| | ||
Sbjct 4711631 AGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAATCGGCGAGGGTGCGACCGTCC 4711690
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||| || || ||||| || |||| | ||||||||||||
Sbjct 4711691 TCCAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGATCCGGCGGGATCCCCTCCTTGTCC 4711750
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||| || || || | |||| || | ||| || || | || || |||
Sbjct 4711751 TGTATCTTCGCCTTCACATTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTGATCGTC 4711810
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 4711811 TTCCCGGTCAGGGTCTTCACGAAGATCTGCAT 4711842
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | | ||| || || ||||| | ||| ||||||||| ||||| || || |
Sbjct 4712072 CCTCCGCGGAGCCTGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCG 4712131
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | | | || || || |||||||||||||||||||| || ||||| || | ||
Sbjct 4712132 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGAGGG 4712191
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || |||||| | || | || | ||| ||
Sbjct 4712192 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 4712251
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || |||||||| || || |||||||| || ||||||||||||
Sbjct 4712252 TCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 4712299
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| || || ||||| | ||| |||| | ||
Sbjct 4726956 AGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGCGAGGGTGCGGCCGTCC 4726897
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || ||||| || |||| | ||||||||||||
Sbjct 4726896 TCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGATCCGGCGGGATCCCCTCCTTGTCC 4726837
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | |||| || | ||| || || | || || |||
Sbjct 4726836 TGAATCTTCGCCTTCACATTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTGATCGTC 4726777
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 4726776 TTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 4726745
>seq569
Length=4400913
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| | ||
Sbjct 2057967 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 2058026
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 2058027 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 2058086
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||| || || | ||| ||||||
Sbjct 2058087 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTC 2058146
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| ||||| || || |||||||||||
Sbjct 2058147 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 2058178
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| | ||
Sbjct 2054716 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 2054775
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || |||||||| | || | ||||| || ||
Sbjct 2054776 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCTTTATCC 2054835
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||| || |||| ||| ||||||
Sbjct 2054836 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTC 2054895
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| ||||| || || |||||||||||
Sbjct 2054896 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 2054927
>seq87
Length=12262769
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||| ||||| ||||| | ||| | || | ||
Sbjct 7257219 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCC 7257278
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 7257279 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 7257338
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || | | |||||| || | ||||||
Sbjct 7257339 TGGATCTTGGCCTTCAC--AT--TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTTAT 7257394
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| ||||| ||||| || || |||||||||||
Sbjct 7257395 GGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 7257430
>seq12
Length=4956709
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 34752 CTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATA 34811
||||||| | ||| || || ||||| | |||| ||||||||| ||||| ||||| | |
Sbjct 1013010 CTCCCCTGAGCCTAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGA 1012951
Query 34812 GGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCA 34871
| |||| || || || ||||| ||||||||||||| | |||||||| |||| |
Sbjct 1012950 GCATGCGGCAGTCCTCGAGCTGCTTGCCGGCGAAGATCAAATGCTGCTGGTCCGGCGGTA 1012891
Query 34872 CCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG---CCTCGA 34928
|||||||||||| | || || ||||| | || | | | |||| ||| |
Sbjct 1012890 TCCCCTCCTTGTCCTGGATCTTGGCCTTGAC-GTTGTGACTGGT--GTTGGAGCTCTCCA 1012834
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | ||| |||||||| || ||||||||||| || |||||||||||
Sbjct 1012833 CCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAGATCTGCAT 1012785
>seq32873
Length=187
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||| | || |||| | ||
Sbjct 1 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCC 60
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||||| | |||||||| |||| | ||||||||||||
Sbjct 61 TCAAGCTGCTTGCCGGCGAAGATCAAATGCTGCTGGTCCGGCGGTATCCCCTCCTTGTC 119
>seq91
Length=4251426
Score = 86.0 bits (94), Expect = 4e-12
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 34743 AATCAT--TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTT 34800
|||||| |||||||||| | ||||| ||||| |||| || |||||| || |||||
Sbjct 285765 AATCATAGTTCCTCCCCTGAGCCTCAACACCAGATGAAGAGTCGACTCCTTTTGGATGTT 285824
Query 34801 ATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTG 34860
|||||| | || | || |||| |||| |||||| || || || |||| ||| || ||
Sbjct 285825 ATAGTCTGCAAGAGTTCGTCCATCTTCCAATTGCTTACCAGCAAAAATCAATCGCTGTTG 285884
Query 34861 GTCTTGCGGCACCCCCTCCTTGTC 34884
||| | || | || ||||||||
Sbjct 285885 GTCCGGAGGAATACCTTCCTTGTC 285908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325548409796744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |