Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq49 172 4e-38
seq652 159 3e-34
seq203 149 5e-31
seq22 113 3e-20
seq116 87.8 1e-12
>seq49
Length=4798478
Score = 172 bits (190), Expect = 4e-38
Identities = 177/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| |||||| ||||| ||||| || || ||||| || ||||||||||| ||
Sbjct 2870140 CCTCCCCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCC 2870081
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || || ||||| |||||| | || | || ||||||||||| |||
Sbjct 2870080 AGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2870021
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || |||||||| || |||||||| ||||||| | || | ||||||||| || ||
Sbjct 2870020 ATGCCTTCTTTGTCCTG-AATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTCTCAAC 2869962
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | ||| || ||||| ||||| | ||| || ||||| || ||||||
Sbjct 2869961 TTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCATT 2869913
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| ||| |||||||||||||| |||||||| ||||| ||||| ||||| ||
Sbjct 2846206 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 2846147
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| ||||| || ||||||||| | || | || ||||| || || ||
Sbjct 2846146 AGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 2846087
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| |||||||||||||| ||| || | |||||| | || | ||||| || ||| ||
Sbjct 2846086 ATTCCCTCTTTGTCTTG-AATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAAC 2846028
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 2846027 CTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2845980
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||
Sbjct 2841084 CCTCCCCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCCGCC 2841025
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || || ||||| || ||| | || | || ||||||||||| |||
Sbjct 2841024 AAAGTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2840965
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || |||||| | |||||| | || | |||||||| || ||
Sbjct 2840964 ATGCCTTCCTTGTCCTG-AATTTTCGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAAC 2840906
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | ||| || ||||| ||||| | ||| || ||||| || ||||||
Sbjct 2840905 TTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCATT 2840857
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||| |||||| ||||| ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 2847072 CCTGCCCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCC 2847013
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || || ||||| |||||| | || | || ||||||||||| |||
Sbjct 2847012 AAAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2846953
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || |||||||| |||||| | || | |||||||| || ||
Sbjct 2846952 ATGCCTTCCTTGTCCTG-AATTTTTGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAAC 2846894
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | ||| || ||||| ||||| | ||| || ||||| || ||||||
Sbjct 2846893 TTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCATT 2846845
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| ||| ||||||||||| || |||||||| || || ||||||||||| ||
Sbjct 2840628 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 2840569
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||||| ||| ||||| || ||||| ||| | || | || ||||| || || ||
Sbjct 2840568 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2840509
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| || ||||| ||| || | |||||| | || | |||||||| ||| ||
Sbjct 2840508 ATTCCCTCCTTATCTTG-AATCTTGGCCTTGACATTATCAATCGTGTCAGAGCTTTCAAC 2840450
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 2840449 CTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2840402
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| ||| ||||||||||| || |||||| | || || ||||||||||| ||
Sbjct 2846617 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATCCCTTCTGGATGTTATAATCAGCC 2846558
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||||| ||| ||||| || |||| ||| | || | || ||||| || || ||
Sbjct 2846557 AGGGTGCGACCATCCTCGAGCTGCTTGCTTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2846498
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| || ||||| ||| || | || ||| | || | ||||| || ||| ||
Sbjct 2846497 ATTCCCTCCTTATCTTG-AATCTTGGCCTTAACATTATCGATCGTGTCGGAGCTTTCAAC 2846439
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || ||||| ||||||||
Sbjct 2846438 CTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2846391
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || || | ||| || || || || ||||||||||| ||||| ||
Sbjct 2847300 CCACCACGCAGACGGAGGACAAGATGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCC 2847241
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| ||||||| || || ||| | ||||| | ||||| || || |||
Sbjct 2847240 AGTGTCCGGCCATCCCCGAGTTGCTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGA 2847181
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| |||| || ||||||| | || | ||||| || || |||
Sbjct 2847180 ATGCCCTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCAACT 2847121
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || ||||| |||||||| | || || ||||| | ||||||
Sbjct 2847120 TCCAAGGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAACCTGCAT 2847074
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||| ||| || || || || ||||||||||| || || || | || ||
Sbjct 2870357 ACGGAGGACCAGATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCCAGTGTCCGGCC 2870298
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || || || ||||||| | ||||| ||||| ||||| || || ||
Sbjct 2870297 ATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGGAATGCCTTCCTT 2870238
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| |||| || |||||| | || | |||||||| || ||||| | || ||
Sbjct 2870237 ATCCTGTATCTTCGACTTGACATTATCGATCGTGTCAGAGCTCTCCACTTCCAAGGTGAT 2870178
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| ||||| || | ||| || ||||| ||||||||
Sbjct 2870177 AGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCAT 2870142
>seq652
Length=2384379
Score = 159 bits (176), Expect = 3e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||||| ||| |||||||| ||||| |||||||| ||||||||||| || || ||
Sbjct 465057 TCCTCCCCTCAGACGGAGCACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCTGC 464998
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || | ||| |||||||| ||||||||| | ||||| || ||||| || || ||
Sbjct 464997 GAGCGTCCTGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 464938
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| ||||| || | ||| || || | || | |||||| ||| ||| ||
Sbjct 464937 GATTCCCTCCTTGTCCTGGATTTTCGCCTTCACGTTATCGATAGTGTCCGAACTTTCGAC 464878
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| || |||||||| | ||| || ||||| || |||||
Sbjct 464877 CTCGAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACAAAGATTTGCAT 464830
Score = 158 bits (174), Expect = 9e-34
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| ||||||||||| ||||| ||||| || || || ||||||||||||||
Sbjct 465284 CCCCCCCTCAATCGCAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCC 465225
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || |||||||| || ||| | || | ||||||||||| || |||
Sbjct 465224 AAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGA 465165
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || |||||| | ||||||| | || | |||||||| || ||
Sbjct 465164 ATGCCTTCCTTGTCCTG-AATTTTCGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAAC 465106
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | || || || || ||||||| ||| || ||||| || ||||||
Sbjct 465105 TTCCAAGGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTGCATT 465057
Score = 145 bits (160), Expect = 6e-30
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || ||||| || || |||||||| || |||||||||||||| ||
Sbjct 464600 CCACCCCTGAGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCC 464541
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || || || ||||||||| | || | || ||||| ||||| ||
Sbjct 464540 AAAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGG 464481
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||||| || || ||| | || || ||||| ||| ||| ||
Sbjct 464480 ATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAACTGTGTCTGAACTTTCAACC 464421
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792
||||| || || || |||||||| | |||||| || || || ||||| | |||
Sbjct 464420 TCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTGCATCTAAAA 464368
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || | ||| |||||||| ||||| || ||||| || || || || || || ||
Sbjct 464828 CCACCTCTGAGACGAAGCACCAAGTGAAGTGTTGATTCCTTCTGGATATTGTAGTCTGCC 464769
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || || || ||||| || | ||||| ||||||||||| || |||
Sbjct 464768 AGGGTCCTACCATCCTCAAGCTGCTTGCCTGCGAAAATCAACCTTTGCTGATCTGGGGGA 464709
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | ||| || ||| | || | ||||| ||| ||| ||
Sbjct 464708 ATTCCCTCCTTGTCCTGGATTTTCGCCTTTACATTATCGATGGTGTCCGAACTTTCAACC 464649
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || |||||||| | ||| || ||||||||||||||
Sbjct 464648 TCTAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAATATCTGCAT 464602
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||| | ||| || || || || ||||| ||||| |||||||| | || || |
Sbjct 465500 CGAAGCACAAGATGTAGAGTTGACTCCTTTTGGATGTTGTAATCCGCCAGTGTCCGGCCA 465441
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || || |||||| | ||||| || |||||||| || ||||| || || |||
Sbjct 465440 TCCTCGAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTG 465381
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| |||| || ||||||| | || || || || || || ||||| | ||||||
Sbjct 465380 TCCTGTATCTTAGCTTTGACATTATCAACGGTATCCGAGCTCTCGACTTCCAAAGTTATG 465321
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || | ||| || ||||||||||||||
Sbjct 465320 GTCTTCCCGGTAAGGGTCTTGACAAATATCTGCAT 465286
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || ||||| || || || || ||||| || ||||||||||| ||
Sbjct 465740 CCACCACGCAGACGAAGGACCAAGTGCAGAGTTGACTCTTTCTGGATGTTATAATCGGCC 465681
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || ||||| || || ||| | |||| || ||||| || || ||
Sbjct 465680 AGTGTCCTTCCGTCTTCCAGTTGCTTCCCGGCAAAAATCAGCCTCTGCTGGTCTGGAGGG 465621
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | ||| || ||| | || | ||||| ||| || ||
Sbjct 465620 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGAACTCTCCACC 465561
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| ||||| || || || || || | || || ||||| |||||||||
Sbjct 465560 TCCAGAGTGATGGTCTTTCCGGTCAGAGTCTTGACAAAAATCTGCATT 465513
>seq203
Length=8626763
Score = 149 bits (164), Expect = 5e-31
Identities = 175/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||| |||||||| || || || || || || |||||||||||||| ||
Sbjct 5730156 CCTCCCCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 5730097
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || || ||||||||| | || | || ||||| ||||| ||
Sbjct 5730096 AAGGTTCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 5730037
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| |||||||| ||| ||| | || | ||||| || ||| ||
Sbjct 5730036 ATCCCTTCCTTGTCTTG-AATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCAC 5729978
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792
||||| || || || ||||| || | |||||| ||||| || ||||| | |||
Sbjct 5729977 CTCAAGGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCATCTGAAA 5729924
Score = 138 bits (152), Expect = 9e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||||||| |||||||| || || || || ||||| || |||||||| || |||
Sbjct 5730612 CCACCCCTCAAACGGAGCACCAAGTGGAGAGTAGACTCTTTCTGGATGTTATAGTCTGCA 5730553
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || |||||||| | || | ||| ||||| ||||| |||
Sbjct 5730552 AGAGTCCTGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGGGGA 5730493
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| |||||| | || ||| | || | ||||| || ||| ||
Sbjct 5730492 ATACCCTCCTTGTCTTG-AATTTTCGCCTTAACATTGTCAATGGTGTCCGAGCTTTCCAC 5730434
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | |||||| || || || || | || || || || ||||||||
Sbjct 5730433 TTCCAAAGTTATGGTCTTCCCGGTAAGCGTCTTCACGAAAATCTGCAT 5730386
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||| |||||| |||||||| || || ||||||||||| || ||||| || ||||||
Sbjct 5730384 CCACCCCGCAAACGGAGCACCAAGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCCGCA 5730325
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || || ||| | || | || ||||| ||||| |||
Sbjct 5730324 AGCGTCCTGCCATCTTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCCGGTGGA 5730265
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| |||||||| | || |||||| | || | |||||||| || |||
Sbjct 5730264 ATACCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 5730205
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || ||||| | ||| || ||||| || |||||
Sbjct 5730204 TCTAGGGTAATTGTCTTCCCAGTGAGGGTCTTCACAAAGATTTGCAT 5730158
Score = 109 bits (120), Expect = 4e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || ||||| ||||| || || || || || | || |
Sbjct 5730829 ACGGAGGACAAGGTGGAGGGTCGATTCCTTTTGGATATTGTAGTCGGCCAGTGTCCTGCC 5730770
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||| || ||| | |||| |||||||| ||||| ||||||||||||||
Sbjct 5730769 ATCTTCAAGTTGTTTACCCGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCCTCTTT 5730710
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || |||||| | || ||| | || | ||||| || ||| || || ||||| |
Sbjct 5730709 GTCCTG-AATTTTAGCCTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCGAGAGTAA 5730651
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || ||||| | || || || || ||||||||
Sbjct 5730650 TTGTCTTCCCAGTAAGAGTCTTCACGAAAATCTGCAT 5730614
>seq22
Length=3960921
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | | |||||||| || || || || || || || ||||| || || ||
Sbjct 262655 CCTCCCCTGAGCCTCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 262714
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| ||||| || || || || | |||| || ||||| ||||| |||
Sbjct 262715 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 262774
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| ||||| || | || ||||| | || | ||||| || || ||
Sbjct 262775 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 262834
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || |||||||| ||||| || || || ||||||||
Sbjct 262835 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 262881
>seq116
Length=10441785
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| |||||||| || || || ||||| ||||| || | ||| | || ||||| ||
Sbjct 4711868 TGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTCCTGCCGTCCTCGAGCTGC 4711927
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || || | |||| | |||||||||||||| || ||||| ||||| || | ||
Sbjct 4711928 TTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTG 4711987
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
||||| | || | ||||| || || || || || || || |||||||| ||
Sbjct 4711988 GCCTTGACGTTATCGATCGTGTCCGAGCTCTCGACCTCGAGCGTGATGGTTTTGCCGGTC 4712047
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
| ||| || || || ||||||||
Sbjct 4712048 AGGGTCTTGACGAAGATCTGCAT 4712070
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| ||||| || ||||| || ||||| ||||| || | ||| | || ||||| ||
Sbjct 4726719 TGGAGCGTCGACTCTTTCTGGATGTTGTAATCGGCGAGGGTTCTGCCGTCCTCGAGCTGC 4726660
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || || | |||| | |||||||||||||| || ||||| || || || | |||
Sbjct 4726659 TTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTGGATTTTG 4726600
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
||||| | || | ||||| || || || || || || || || ||||| |||
Sbjct 4726599 GCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGCGTGATGGTCTTGCCGGTT 4726540
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
| ||| || || || ||||||||
Sbjct 4726539 AGGGTCTTGACGAAGATCTGCAT 4726517
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| ||||| || || || || || || ||||| || | ||| | | || ||||| ||
Sbjct 4726491 TGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGGGTCCTACCGTCCTCGAGCTGC 4726432
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| ||||| | |||| | |||||||||||||| || ||||| ||||| || | |||
Sbjct 4726431 TTTCCAGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATTTTG 4726372
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
||||| | || | ||||| || || || || || || || || || || ||
Sbjct 4726371 GCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGCGTGATGGTCTTCCCGGTC 4726312
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
| ||| || || || ||||||||
Sbjct 4726311 AGGGTCTTGACGAAGATCTGCAT 4726289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385048419809016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |