Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq35365 95.1 4e-15
seq31086 93.3 2e-14
seq86 89.7 2e-13
>seq35365
Length=745
Score = 95.1 bits (104), Expect = 4e-15
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| |
Sbjct 710 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 651
Query 50170 CTGCTCTACTCCGC-ATTA 50187
||||||||| |||| ||||
Sbjct 650 CTGCTCTACCCCGCGATTA 632
>seq31086
Length=5831
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 5484 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 5425
Query 50170 CTGCTCTACTCCGC 50183
||||||||| ||||
Sbjct 5424 CTGCTCTACCCCGC 5411
>seq86
Length=7715951
Score = 89.7 bits (98), Expect = 2e-13
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| |||||||||||||| |||| ||| ||||||||| |||||||||| |
Sbjct 330566 GTTGCGGAGACGGGATTTGAACCCCTCACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 330507
Query 50170 CTGCTCTACTCCGC-ATTA 50187
|||||||||||||| ||||
Sbjct 330506 CTGCTCTACTCCGCGATTA 330488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181524753773712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |