Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq444 590 7e-164
seq10427 545 3e-150
seq32303 379 2e-100
seq31551 239 5e-58
seq31730 210 2e-49
seq231 187 3e-42
seq111 176 5e-39
seq328 174 2e-38
seq31523 156 5e-33
seq155 147 2e-30
seq77 145 8e-30
seq85 127 2e-24
seq203 123 3e-23
seq31544 109 6e-19
seq134 100 3e-16
>seq444
Length=4271
Score = 590 bits (654), Expect = 7e-164
Identities = 728/990 (74%), Gaps = 4/990 (0%)
Strand=Plus/Minus
Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110
||||| | ||| ||||| ||| | |||||| | || |||| ||||| ||||| |
Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055
Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGCTTC-ATTGTTGCATTCGTAGCAGCACC 157169
||||| || || || | | |||||| |||| || ||| | |||||| | || || ||
Sbjct 1054 ATGATCCCTACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCC 996
Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229
||| || ||||| || |||||||| ||||| ||| |||| ||||| | || || |||||
Sbjct 995 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 936
Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289
|| || || ||||| || ||||| |||| || || || | || || ||||| ||
Sbjct 935 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAAT 876
Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349
||||||||| ||||| ||||||| ||||| |||||||| ||||||| |||| | ||
Sbjct 875 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGT 816
Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409
| ||||| | | || | | |||||||| ||||||||||||||| || |||
Sbjct 815 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 756
Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469
| | |||||||| || ||||| |||||| || || || || || || ||||||| |||
Sbjct 755 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 696
Query 157470 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 157529
|| ||| | ||||||| | ||||| || ||| || |||| ||||||||| || ||
Sbjct 695 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 636
Query 157530 CTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCC 157589
|||||||||||| |||| |||| | || |||||||| |||||||| ||||||||||| ||
Sbjct 635 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 576
Query 157590 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 157649
|| |||||| | || || ||||| |||||||| || || | || ||||||||| ||
Sbjct 575 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 516
Query 157650 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATG 157708
| || |||| || | ||| || | ||||| || |||| || || || | |
Sbjct 515 TTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 457
Query 157709 GTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCG 157768
|||||| ||||| ||||||||||| || |||||||| || ||||| |||||||| || |
Sbjct 456 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 397
Query 157769 GTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCG 157828
| || |||| |||||||| ||| |||||||| | | | || |||||| | |
Sbjct 396 GCCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 337
Query 157829 CCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 157888
| || ||||| || || || || ||||| ||||| | || | || || ||||| ||||
Sbjct 336 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 277
Query 157889 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 157948
|||| || |||||||| |||||||| || | ||||| |||| || ||||| | || |
Sbjct 276 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 217
Query 157949 CCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158008
| ||||| ||| | | ||||| ||| ||||||||||||||||||||||| ||||| |
Sbjct 216 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 157
Query 158009 CACACAACTTCCCACTGGATCTTGCTGCTG 158038
| ||||||||||| || || || |||||||
Sbjct 156 CTCACAACTTCCCTCTAGACCTAGCTGCTG 127
>seq10427
Length=4047
Score = 545 bits (604), Expect = 3e-150
Identities = 729/1011 (72%), Gaps = 2/1011 (0%)
Strand=Plus/Plus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| || ||||||||||| || ||||||||
Sbjct 776 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 835
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | ||| | || |||||| | || || || || ||
Sbjct 836 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 895
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTT 158954
| || |||||||| |||||| | || | ||||||| | || ||| || ||| |
Sbjct 896 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 955
Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014
|| || |||||||| ||||| ||| || | | | |||||| | || | || ||||||
Sbjct 956 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 1015
Query 159015 CCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 159074
||||| || ||||| ||||| | ||| ||| | || || || ||| ||||||
Sbjct 1016 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 1075
Query 159075 GCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 159133
|| |||||||| || || || |||| ||||| ||| | || || |||||||| || ||
Sbjct 1076 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 1135
Query 159134 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159193
||| || | | || || || ||||| || || ||||||||||| ||||||||||||||
Sbjct 1136 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 1194
Query 159194 CAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 159253
|||||||| || || ||||| ||||| || ||||||| || || || |||||
Sbjct 1195 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 1254
Query 159254 GGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAA 159313
|| || || ||||| | ||| | ||||| | |||||||| || ||||||||| | ||
Sbjct 1255 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 1314
Query 159314 CCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCA 159373
||| || |||||||||||||| || ||| | || || | || || |||| ||||||||
Sbjct 1315 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 1374
Query 159374 TGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 159433
||| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 1375 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 1434
Query 159434 GTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 159493
||| | ||||||||| || || |||||||| |||||||| || |||||||| |||||
Sbjct 1435 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 1494
Query 159494 GCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGT 159553
|| ||||| || |||| ||||| || || || ||| | |||||||||||||| |||||
Sbjct 1495 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 1554
Query 159554 GCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCG 159613
|| || | ||| |||||| | |||| | | ||| | ||| | || || ||
Sbjct 1555 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTAGCTTTGAACCTACG 1614
Query 159614 TGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTT 159673
||| || || ||||| || || ||| | ||||| ||||||||||||||||| || ||
Sbjct 1615 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 1674
Query 159674 CTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 159733
||| || || || |||||| | || ||||| | ||||||||| |||| || |||||
Sbjct 1675 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 1734
Query 159734 ACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
|| ||||||||| | || ||||| || || ||||||||| | || |||||
Sbjct 1735 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 1785
>seq32303
Length=834
Score = 379 bits (420), Expect = 2e-100
Identities = 509/703 (72%), Gaps = 4/703 (1%)
Strand=Plus/Minus
Query 158805 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTACCCACTGCTTATCTTGCT 158864
|| |||||||||||||| || ||||| || || | || | || ||| ||| | ||
Sbjct 706 GACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCC 647
Query 158865 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCT 158924
| || |||||| | || || || || || | || |||||||| |||||| | ||
Sbjct 646 TTAGGTGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCC 587
Query 158925 ACTTCCTATCTTGAGGG-TGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGC 158983
| ||||||| | || || ||||| ||| | || || |||||||| ||||| ||| ||
Sbjct 586 AGTTCCTATTTGGAAGGATGCAA-CTTCTTAACTGCCGCAGTTTCTACTCCTGCTAATAG 528
Query 158984 TATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 159043
| | | |||||| | || | || ||||||||||| || ||||| ||||| | ||
Sbjct 527 TTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 468
Query 159044 GGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGG 159103
| |||| | || || || |||| ||||||||| |||||||| || || | ||||| ||
Sbjct 467 GTGCCAATTAGGTGGTCTGTGGACTTTTGTGGCTCTCCACGGCGCTTTCGGACTAATAGG 408
Query 159104 TTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTA 159162
||||||| | || || |||||||| || || ||| || | | || || || ||||| |
Sbjct 407 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 349
Query 159163 TTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTC 159222
| || || |||||||| |||||||||||||| || ||||| || || ||||| ||||
Sbjct 348 TCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTC 289
Query 159223 AGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCT 159282
|||| ||||||| || || || ||||| || || || ||||| | ||| | || |
Sbjct 288 AGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTCATCCTTT 229
Query 159283 TCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGTA 159342
| | |||||||| || ||||||||| | ||||| || ||||||||||||||||| |||
Sbjct 228 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCCGGTG 169
Query 159343 TCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACG 159402
| | || | || || |||| ||||||||||| | || || |||||||| |||| |
Sbjct 168 TATTGGGCGCTGCTCTCCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTG 109
Query 159403 AGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTT 159462
| ||||| || ||||| || || || ||| | ||||||||| || || ||||
Sbjct 108 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTT 49
Query 159463 ATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 159505
|||| |||||||| || || ||||| ||||| || ||||| ||
Sbjct 48 ATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGG 6
>seq31551
Length=1713
Score = 239 bits (264), Expect = 5e-58
Identities = 320/440 (73%), Gaps = 10/440 (2%)
Strand=Plus/Minus
Query 157608 TGCTGGG-GTA-TTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCC 157665
|| |||| ||| ||||| || ||| | ||| ||||||||| || | || || ||
Sbjct 1161 TGTTGGGTGTACTTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC- 1103
Query 157666 TCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGTCA 157724
| | ||| || | ||||| || |||| || || || ||||||| ||||||||
Sbjct 1102 TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGTAGGTTACAGATTCGGTCA 1043
Query 157725 AGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGATCTTCCA 157784
||||||||| || || || ||||| ||||| || ||||| || || || ||||||||||
Sbjct 1042 AGAAGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCA 983
Query 157785 ATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCCTGTTGT 157844
||| ||| ||||||| | | || |||||||| || || |||||||| ||
Sbjct 982 ATATGCTAGTGTCAACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGT 923
Query 157845 CGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAA 157904
|| |||||||||||||| | || | ||||||||||| || || | |||||||||||
Sbjct 922 AGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAA 863
Query 157905 CTTCAACCAGTCCATCCTTGATGGTC------AGGGTCGTGTGTTGAACACCTGGGCAGA 157958
|||||||| || | ||||| ||| | |||| ||| | || |||||||| ||
Sbjct 862 TTTCAACCAATCTGTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGA 803
Query 157959 TGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158018
| || | ||||| ||| ||||||||||||||||||||||| ||||| || || |||||
Sbjct 802 TCTCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 743
Query 158019 CCCACTGGATCTTGCTGCTG 158038
||| || || || |||||||
Sbjct 742 CCCCCTAGACCTAGCTGCTG 723
>seq31730
Length=297
Score = 210 bits (232), Expect = 2e-49
Identities = 208/269 (77%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 157381 ATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTTGCC 157440
||||| ||||||||||||||| || |||| | ||||||||||| ||||| ||||||
Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCA 60
Query 157441 TACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGT 157500
|| || || || || || ||||| | ||| || ||| | |||| || | ||||||||
Sbjct 61 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGA 120
Query 157501 TCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGTCTTC 157560
||| || |||| ||||||||| || || ||||||||||| |||| ||| | || |||
Sbjct 121 AGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTC 180
Query 157561 CAGGCAGAGCACAATATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTC 157620
||||| |||||||| || |||||||| || || |||||| | ||||| ||||| ||||||
Sbjct 181 CAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTC 240
Query 157621 GGTGGATCTTTGTTCTCTGCTATGCACGG 157649
|| || || | ||| ||||||||| ||
Sbjct 241 GGCGGCTCCCTATTCAGTGCTATGCATGG 269
>seq231
Length=1485859
Score = 187 bits (206), Expect = 3e-42
Identities = 237/326 (73%), Gaps = 0/326 (0%)
Strand=Plus/Minus
Query 159443 AACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 159502
|||||||| || || || ||||| |||||||| || || ||||| ||||| || |||||
Sbjct 476711 AACTCAAGCTGAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 476652
Query 159503 CGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTAT 159562
|| |||| ||||| || || | ||| | ||||| |||||||| ||||| || || |
Sbjct 476651 TGGGGTTGCTTTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAAC 476592
Query 159563 GGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGA 159622
||| |||||| | |||| | | ||||| ||| | || || ||||| || |
Sbjct 476591 CGGTTTATGGATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAA 476532
Query 159623 TTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAA 159682
||||| | || |||||| | |||||||||||||| ||||||||||| ||||||| |||
Sbjct 476531 CTTCGTTTGCCAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAA 476472
Query 159683 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGA 159742
|| ||||| | || ||| | | |||||| | |||| || |||||||| |||||
Sbjct 476471 AAATATTCTCTTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGA 476412
Query 159743 AAACTTCATCTTCCCAGAAGAAGTTC 159768
|||| | || || | || || ||||
Sbjct 476411 AAACCTTATATTTCTTGAGGAGGTTC 476386
>seq111
Length=3019079
Score = 176 bits (194), Expect = 5e-39
Identities = 198/265 (75%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 159508 TTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTC 159567
|||| ||||| || || || ||| | |||||||||||||| ||||| || || | |||
Sbjct 6799 TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 6740
Query 159568 TATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCG 159627
|||||| | |||| | | ||||| ||||| || || ||||| || || ||||
Sbjct 6739 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCG 6680
Query 159628 TGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACA 159687
| || |||||| | ||||| |||||||| ||||||||||| ||||||||||| || |
Sbjct 6679 TTTCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATA 6620
Query 159688 TTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACT 159747
|||| | || ||||| | ||||||||| |||| || ||||| || |||||||||
Sbjct 6619 TTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 6560
Query 159748 TCATCTTCCCAGAAGAAGTTCTACC 159772
| || ||||| || || ||||||||
Sbjct 6559 TTATATTCCCTGAGGAGGTTCTACC 6535
>seq328
Length=921196
Score = 174 bits (192), Expect = 2e-38
Identities = 203/274 (74%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 159473 CACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCT 159532
||| || || ||||| ||||| || ||||| || |||| ||||| || || || ||| |
Sbjct 671670 CACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTT 671611
Query 159533 TCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTAT 159592
|||||||||||||| ||||| || || | ||| |||||| | |||| | |
Sbjct 671610 ACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 671551
Query 159593 TGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGA 159652
||||| ||||| || || ||||| || || ||||| || |||||| | ||||| ||
Sbjct 671550 CGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGA 671491
Query 159653 AGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGC 159712
|||||| ||||||||||| ||||||||||| || ||||| | || |||| | |||||
Sbjct 671490 AGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGC 671431
Query 159713 TTGGTTGGCACCTGCTGATCAACCCCATGAAAAC 159746
|||| |||| || ||||| || |||||||||
Sbjct 671430 TTGGATGGCGGCTCAAGATCAGCCTCATGAAAAC 671397
>seq31523
Length=225
Score = 156 bits (172), Expect = 5e-33
Identities = 155/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 157708 GGTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTC 157767
||||||| ||||||||||| ||||| || || || ||||| ||||| || ||||| ||
Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84
Query 157768 GGTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTC 157827
|| || ||||||||||||| ||| |||||||| | | | |||||||||||
Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144
Query 157828 GCCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTC 157887
|| || |||||||| || || |||||||||||||| | || | ||||| ||||| |||
Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTC 204
Query 157888 AACCTCAACGGTTTCAACTTC 157908
||||| || |||||||| |||
Sbjct 205 AACCTAAATGGTTTCAATTTC 225
>seq155
Length=2184526
Score = 147 bits (162), Expect = 2e-30
Identities = 329/486 (68%), Gaps = 16/486 (3%)
Strand=Plus/Minus
Query 158852 TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATAC 158911
||| ||| | ||| | | |||||||| || || || || || | || |||||||
Sbjct 253060 TGCATATTTCGCTTTAAGTGGTTGGCTCACAGGTACAACCTTTGTAACTTCACGGTATAC 253001
Query 158912 ACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCAGCAGTTTCGAC 158971
|||| | | |||| ||||||| | || || ||||| | || || ||||||| ||
Sbjct 253000 TCATGAATTGGCTAGTTCCTATTTGGACGGATGTAACTTCTTAACCGCCGCAGTTTTTAC 252941
Query 158972 TCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGA 159031
||| | | || | | | ||| || | || | || |||| || ||| || ||||| ||
Sbjct 252940 TCCTGTTAATAGTTTAGCACATCCTTTGTTGTTACTATGGGATCTTGATGCACAAGGAGA 252881
Query 159032 TTTCG-TCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCT 159090
||| ||| || ||| | || | | |||| ||||||||| ||||| || || |
Sbjct 252880 TTTTACTCATGT-----CAATTAGGCGATCCGTGGACTTTTGTGGCTCTCCATGGCGCTT 252826
Query 159091 TTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGT 159149
|| ||||| ||||||||| | || || |||||||| || | ||| || | | ||
Sbjct 252825 TTAAACTAATAGGTTTCATG-TACGTCAATTTGAACTTGCTCAATCTGTTCAAT-TGCGA 252768
Query 159150 CCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATC 159209
|| || ||||| || | |||| |||||| |||| ||||||||| | || ||
Sbjct 252767 CCTTATAATGCAATCACATTCTATGGTCCAATTGTTGTTTTTGTACTC----TCA--ATT 252714
Query 159210 TACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTC 159269
|| || || ||||||||||||||||| || || || ||||| | || || |||||
Sbjct 252713 TATCCGCTAGGTCAGTCCAGTTGGTTCTTTGCACCTAATTTTGGTATAGCAGCTATATTT 252654
Query 159270 AGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGATG 159329
| || | | | | |||||||| || || ||||| | ||||| || || |||||
Sbjct 252653 TGCTTTATCATTTCTTTCCAAGGGTTTCATTATCGGACATTGAACCCATTTCAAATGAT- 252595
Query 159330 GGAGTT 159335
||||||
Sbjct 252594 GGAGTT 252589
>seq77
Length=8408033
Score = 145 bits (160), Expect = 8e-30
Identities = 216/305 (71%), Gaps = 6/305 (2%)
Strand=Plus/Plus
Query 157156 TTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTC 157215
||| | || || ||||| | ||||| || ||||||||| |||| || | | |||||
Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754
Query 157216 ATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCC---TTCTTCAAACGCAATCGGT 157272
| ||||| ||||| || ||||| ||||| || |||| ||||||| || || |||
Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCA---GCTATAGGT 2698811
Query 157273 CTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGT 157332
| || | ||||| || | ||||||| ||||| ||||||| ||| | |||||||| |||
Sbjct 2698812 TTGCATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGT 2698871
Query 157333 CCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAG 157392
|||| | || | || | |||||| | | || | | || ||||| ||||||
Sbjct 2698872 CCTTATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAG 2698931
Query 157393 TGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCA 157452
||||||||| || ||| |||||||| || | ||||| |||||| || || || ||
Sbjct 2698932 TGGGAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCT 2698991
Query 157453 GTCGC 157457
|| ||
Sbjct 2698992 GTTGC 2698996
>seq85
Length=5226098
Score = 127 bits (140), Expect = 2e-24
Identities = 127/165 (77%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 157873 AGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 157932
||||| ||||| |||||||| || |||||||| |||||||| ||| | ||||| ||||
Sbjct 1123347 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAA 1123288
Query 157933 GGTCGTGTGTTGAACACCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTT 157992
|||||||| | || || |||| ||| | | || | ||| |||||||||||||||
Sbjct 1123287 GGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATGGAAGTT 1123228
Query 157993 ATGCATGAGCGTAACGCACACAACTTCCCACTGGATCTTGCTGCT 158037
|||||||| |||| || || |||||||| || || || ||| ||
Sbjct 1123227 ATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGCTACT 1123183
>seq203
Length=8626763
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 157378 TATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTT 157437
|| ||||| ||||| ||||||| || |||| ||||||||||||| ||||| ||||
Sbjct 3756518 TACATGGGTTATGAGTAGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTT 3756459
Query 157438 GCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAA 157497
|| || || || || || || |||| | ||| || ||| | |||| || | ||||||
Sbjct 3756458 GCATATTCAGCTCCGGTTGCAACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 3756399
Query 157498 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGTC 157557
|| || | |||| ||||||||| || || || || |||| || | ||| | ||
Sbjct 3756398 GGAAGATTTTATGATGATATGCCTCTAGGAATTTCCAGTGCTTTCAATTTCATGATTGTA 3756339
Query 157558 TTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCA 157595
||||| || |||||||| || |||||| |||| || ||
Sbjct 3756338 TTCCAAGCTGAGCACAACATCCTTATGTATCCATTGCA 3756301
>seq31544
Length=164
Score = 109 bits (120), Expect = 6e-19
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 157911 CCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTCCTGAACCG 157970
||| ||| | ||||| |||| |||||||| | || |||||||| ||| | | || ||
Sbjct 1 CCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 60
Query 157971 CGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGATCT 158030
||| |||||||||||||||||||||||| ||||| || || |||||||| || || ||
Sbjct 61 TGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 120
Query 158031 TGCTGCTG 158038
|||||||
Sbjct 121 AGCTGCTG 128
>seq134
Length=15115857
Score = 100 bits (110), Expect = 3e-16
Identities = 170/244 (70%), Gaps = 7/244 (3%)
Strand=Plus/Minus
Query 157096 TGGTTCGGTGTGCTTATGATTCCAACATTGCTTG---CAGCAACTATCTGCTTCATTGTT 157152
||||| ||||| | ||||| || || || ||| |||| |||| | | ||| ||
Sbjct 3765998 TGGTTTGGTGTTTTGATGATCCCTACCTTA-TTGACTCAGCTTCTATAT---TTATTATT 3765943
Query 157153 GCATTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCT 157212
|| ||| | | || ||||| |||||||| || ||||| | | || || |||| |||
Sbjct 3765942 GCCTTCATTGTTGCTCCTCCAGTTGATATTGATGGTATCTGTAAGCCTATTTCTGGATCT 3765883
Query 157213 CTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGT 157272
|| | ||||| ||||| || || | || || || ||||| || | | | || |||
Sbjct 3765882 CTACTTTATGGTAACAATATTATTTATGATGGCATTATTCCTACTCCTACAACTATAGGT 3765823
Query 157273 CTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGT 157332
| || || ||| | || |||||||||||||| ||||||| ||| | ||||||| ||
Sbjct 3765822 TTGCATTTTTACTCAATATGGGAAGCAGCATCTGTTGATGAATGGTTATACAACGACAGT 3765763
Query 157333 CCTT 157336
||||
Sbjct 3765762 CCTT 3765759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545025664094080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |