Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq10427 560 1e-154
seq444 535 5e-147
seq32303 414 1e-110
seq31730 232 8e-56
seq31551 232 8e-56
seq31523 181 1e-40
seq231 159 4e-34
seq328 154 2e-32
seq111 149 8e-31
seq203 145 9e-30
seq155 127 2e-24
seq77 123 3e-23
seq151 93.3 5e-14
>seq10427
Length=4047
Score = 560 bits (620), Expect = 1e-154
Identities = 728/1004 (73%), Gaps = 2/1004 (0%)
Strand=Plus/Plus
Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008
||||||||||| | |||| ||||| || ||||| ||||||||||| || | ||
Sbjct 786 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCT 845
Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068
|||| ||| ||| | || | || |||||| | || || ||| | ||||| || |
Sbjct 846 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 905
Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 179128
|||| || ||||| | || ||||||||| | |||||| || ||| | || || || |
Sbjct 906 GGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 965
Query 179129 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 179188
| || || |||||| || | | | |||||| | | |||| ||||||||||| | |
Sbjct 966 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 1025
Query 179189 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACG 179248
| || |||| || ||||| ||| | || || |||||| ||| || ||||||||||
Sbjct 1026 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACG 1085
Query 179249 GTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 179307
| || ||||| |||| || || ||| | ||||| |||||||| || || ||| || |
Sbjct 1086 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 1145
Query 179308 ATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTT 179367
| || ||||| ||||| || || || ||||||| ||||| || || ||| ||| ||
Sbjct 1146 -TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 1204
Query 179368 CTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCG 179427
|| || || ||||| || ||||| |||||||||||||||| |||||||| |||||
Sbjct 1205 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCT 1264
Query 179428 ATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCAC 179487
|| ||| ||||| | || || || ||||| || || || |||||| | ||||| |||||
Sbjct 1265 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 1324
Query 179488 ATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACT 179547
||||||||||| || ||| | ||||| | |||||||| | ||||||||||| | |||
Sbjct 1325 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 1384
Query 179548 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTCT 179607
||||| ||||| || | ||||||||| || ||||| ||||| || || || |
Sbjct 1385 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 1444
Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667
|| |||| || || || ||||| ||||| || || ||||| |||||||| || |||||
Sbjct 1445 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 1504
Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727
|||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || |
Sbjct 1505 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 1564
Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787
||| | ||| | | || |||| | | || ||||| | || || ||||| |||||
Sbjct 1565 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTAGCTTTGAACCTACGTGCCTATGAC 1624
Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847
|| || || || ||| | ||||| |||||||| || || ||||| |||||||| ||
Sbjct 1625 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 1684
Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907
|| |||||| | || ||||| | ||||||||| |||| || ||||| || ||||||
Sbjct 1685 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 1744
Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
||| | || ||||| || || || ||||| |||| ||||| ||
Sbjct 1745 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 1788
>seq444
Length=4271
Score = 535 bits (592), Expect = 5e-147
Identities = 720/996 (72%), Gaps = 5/996 (1%)
Strand=Plus/Minus
Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617
||||| | ||| ||||| || | ||||| || || | || ||||| || || ||
Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055
Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTC-ATCGTCGCCTTCGTCGCTGCTCC 177676
||||| || || | ||| | |||||| |||| || || |||| ||| | ||||||||
Sbjct 1054 ATGATCCCTACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCC 996
Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736
|| || || || || || || |||||||| || |||| || || | || || |||||
Sbjct 995 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 936
Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796
|| || || ||||| || | || |||| || ||||| | || || || || ||
Sbjct 935 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAAT 876
Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856
||||||||| ||||| ||||||| ||||| || ||||| ||||||| |||| | ||
Sbjct 875 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGT 816
Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916
| ||||| | | || | | |||||||| ||||||||||||||| | |||
Sbjct 815 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 756
Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976
||| |||||||| || ||||| ||||||||| || || ||||||||||| || | ||
Sbjct 755 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 696
Query 177977 AGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTA 178035
|| ||||| | ||||||| | ||||| || || || |||| ||||||||| || |
Sbjct 695 TGT-TTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 637
Query 178036 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACC 178095
||||||||||||| |||| ||| |||||||||| || || ||||| || ||||||||||
Sbjct 636 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 577
Query 178096 CGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 178155
| || |||||| | ||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 576 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATG 517
Query 178156 GAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATG 178215
| | || |||||| | || | || || ||||||| ||| || || | |
Sbjct 516 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 457
Query 178216 GTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCG 178275
|||||| ||||| |||||||||||||| || ||||| || || || || ||||| || |
Sbjct 456 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 397
Query 178276 GTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCG 178335
| || ||||| ||||||||||| |||||||| || ||||| | || |||||| | |
Sbjct 396 GCCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 337
Query 178336 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTA 178395
| || ||||| ||||| || || ||||| || || | ||| | || ||||| || |
Sbjct 336 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 277
Query 178396 ACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACA 178455
|||| ||||| ||||| |||||||| || | | || | ||||||||||| | || |
Sbjct 276 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 217
Query 178456 CATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATA 178515
| ||||| || | | |||||||| || || |||||||| ||||| ||| | |||
Sbjct 216 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT- 158
Query 178516 GCACATAACTTCCCGCTTGATCTTGCAGCAGCTGAG 178551
|| || |||||||| || || || || || | ||||
Sbjct 157 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 122
>seq32303
Length=834
Score = 414 bits (458), Expect = 1e-110
Identities = 531/727 (73%), Gaps = 4/727 (1%)
Strand=Plus/Minus
Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008
||||||||||| | | | || || || || ||||| |||||||| || || | ||
Sbjct 726 TGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCT 667
Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068
|||| ||| ||| | ||| | || |||||| | || || ||| | ||||| || |
Sbjct 666 TTCCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 607
Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 179127
|||| |||||||| | || ||||||||| | ||||| ||| ||||| | || || ||
Sbjct 606 GGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGC-AACTTCTTAACTGCCGCA 548
Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187
|| || || |||||| || | | | |||||| | | |||| ||||||||||| |
Sbjct 547 GTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 488
Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247
|| || |||| || ||||||||| | || || || |||| ||| ||||||||||||
Sbjct 487 CAAGGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGTGGCTCTCCAC 428
Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGG 179306
|| || |||| ||||| || |||||| | ||||| |||||||| || || ||| ||
Sbjct 427 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAA 368
Query 179307 TATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATT 179366
| | || ||||| ||||| || || ||| ||||||| ||||| || || ||| ||||||
Sbjct 367 T-TGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATT 309
Query 179367 TCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGC 179426
|| || || ||||| || || || |||||||||||||||| |||||||| || ||
Sbjct 308 CCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGC 249
Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486
|| ||| | ||| | ||||| || ||||| || || || |||||| | ||||| |||||
Sbjct 248 TATATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 189
Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546
|||||||||||||| ||| | |||| | |||||| || | ||||||||||| | ||
Sbjct 188 TATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTCATGGTGCTAC 129
Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606
||||| ||||| || | ||||||||| || ||||| ||||| || || || |
Sbjct 128 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCC 69
Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666
|| |||| || || || ||||| ||||| || || || || |||||||| || |||||
Sbjct 68 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 9
Query 179667 CGGGGTT 179673
||||||
Sbjct 8 TGGGGTT 2
>seq31730
Length=297
Score = 232 bits (256), Expect = 8e-56
Identities = 215/270 (80%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 177888 ATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCA 177947
||||| ||||||||||||||| | |||||| ||||||||||| ||||| |||||||
Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCA 60
Query 177948 TACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCAAGG 178006
|| || || ||||||||||| || | || || ||||| | |||| || | ||||||||
Sbjct 61 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATTGGTCAAGG 119
Query 178007 TTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATT 178066
|| || |||| ||||||||| || || ||||||||||| |||| |||| |||||||
Sbjct 120 AAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATT 179
Query 178067 CCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATT 178126
||| || || ||||| |||||||||||||| || |||||| | || || ||||| |||||
Sbjct 180 CCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATT 239
Query 178127 CGGTGGATCTCTTTTCTCTGCTATGCATGG 178156
||| || || || ||| ||||||||||||
Sbjct 240 CGGCGGCTCCCTATTCAGTGCTATGCATGG 269
>seq31551
Length=1713
Score = 232 bits (256), Expect = 8e-56
Identities = 322/445 (72%), Gaps = 11/445 (2%)
Strand=Plus/Minus
Query 178115 TGCTGGG-GTA-TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCT 178172
|| |||| ||| ||||| || ||||| ||| |||||||||||| | || || |||
Sbjct 1161 TGTTGGGTGTACTTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCT 1102
Query 178173 TCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAA 178232
| || | || || ||||||| ||| || || ||||||| ||||| |||
Sbjct 1101 AGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGTAGGTTACAGATTCGGTCAA 1042
Query 178233 GAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAA 178292
||||||||||| ||||| ||||| || || |||||||| || || || ||||||||||||
Sbjct 1041 GAAGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAA 982
Query 178293 TATGCATCGT-TCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGT 178351
||||| | || ||||||| || ||||| | || |||||||| || || |||||||||||
Sbjct 981 TATGC-TAGTGTCAACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGT 923
Query 178352 TGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAA 178411
|| ||||||||||| || | ||| | ||||||||| ||| || | || || |||||
Sbjct 922 AGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAA 863
Query 178412 CTTCAACCAGTCCATCCTCG------ACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178465
|||||||| || | | | | ||| |||| | ||| | || || ||||| ||
Sbjct 862 TTTCAACCAATCTGTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGA 803
Query 178466 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACT 178525
| | |||||||| || || |||||||| ||||| ||| | ||| || |||||||
Sbjct 802 TCTCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCATAACT 744
Query 178526 TCCCGCTTGATCTTGCAGCAGCTGA 178550
|||| || || || || || | |||
Sbjct 743 TCCCCCTAGACCTAGCTGCTGTTGA 719
>seq31523
Length=225
Score = 181 bits (200), Expect = 1e-40
Identities = 175/225 (78%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 178191 ACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAAC 178250
||||||| ||| || || | ||||||| ||||| ||||| |||||||| |||||
Sbjct 1 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 60
Query 178251 ATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAAC 178310
||||| || || |||||||| || || || ||||||||||||||||| ||||||||
Sbjct 61 ATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 120
Query 178311 TCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCA 178370
|| ||||| | ||||||||||| || || ||||||||||| || ||||||||||| ||
Sbjct 121 TCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCT 180
Query 178371 CTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTC 178415
| ||| | ||| ||||| || ||||| ||||| ||||| |||
Sbjct 181 TTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 225
>seq231
Length=1485859
Score = 159 bits (176), Expect = 4e-34
Identities = 222/311 (71%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667
|| |||| || || |||||||| ||||| || || || || |||||||| || |||||
Sbjct 476710 ACTCAAGCTGAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 476651
Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727
|||||| | ||| |||||| ||||||| || || |||| | | ||||| || || |
Sbjct 476650 GGGGTTGCTTTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACC 476591
Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787
||| | ||| | | || |||| | | || || ||| | || || ||||| ||| |
Sbjct 476590 GGTTTATGGATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAAC 476531
Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847
|| || | || |||||| | ||||||||||||||||| || || || ||||| | ||
Sbjct 476530 TTCGTTTGCCAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAA 476471
Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907
|| ||||| | || ||| | | |||||| | |||| || |||||||| ||||||
Sbjct 476470 AATATTCTCTTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAA 476411
Query 179908 AACTTCATCTT 179918
||| | || ||
Sbjct 476410 AACCTTATATT 476400
>seq328
Length=921196
Score = 154 bits (170), Expect = 2e-32
Identities = 198/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 179638 ACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTC 179697
|| || || || |||||||| || ||||| |||||| | ||| |||||| ||||||||
Sbjct 671669 ACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 671610
Query 179698 CACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATT 179757
|| ||||||| | | ||||| || || | ||| | ||| | | || |||| | |
Sbjct 671609 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 671550
Query 179758 GGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAA 179817
|| || ||||| || || ||||| ||||| || || || |||||| | ||||| |||
Sbjct 671549 GGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGAA 671490
Query 179818 GATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCT 179877
|||||||| || || || ||||| || || || ||||| | || |||| | ||||||
Sbjct 671489 GATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGCT 671430
Query 179878 TGGTTGGCACCTGCTGATCAACCACATGAAAAC 179910
||| |||| || ||||| || |||||||||
Sbjct 671429 TGGATGGCGGCTCAAGATCAGCCTCATGAAAAC 671397
>seq111
Length=3019079
Score = 149 bits (164), Expect = 8e-31
Identities = 192/265 (72%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 179682 CAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTC 179741
|||||| |||||||| || ||||||| | | ||||| || || | ||| | ||| |
Sbjct 6789 CAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 6730
Query 179742 TTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGA 179801
| || |||| | | || || ||||| || || ||||| ||||| || || || ||
Sbjct 6729 TGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGA 6670
Query 179802 GATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAA 179861
|||| | ||||| ||||||||||| || || || ||||| || || || ||||| | ||
Sbjct 6669 GATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAA 6610
Query 179862 TGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCC 179921
||||| | ||||||||| |||| || ||||| || ||||||||| | || |||||
Sbjct 6609 CGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 6550
Query 179922 AGAAGAAGTCCTACCTAGTGGTAAC 179946
|| || || ||||| |||| |||
Sbjct 6549 TGAGGAGGTTCTACCCCGTGGAAAC 6525
>seq203
Length=8626763
Score = 145 bits (160), Expect = 9e-30
Identities = 165/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 177885 TATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTT 177944
|| ||||| ||||| ||||||| | |||||||||||||||||| ||||| ||||
Sbjct 3756518 TACATGGGTTATGAGTAGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTT 3756459
Query 177945 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTCA 178003
||||| || || || |||||| | || | || || ||||| | |||| || | |||||
Sbjct 3756458 GCATATTCAGCTCCGGTTGCAACTGCTACTGCTGT-TTTCTTGATCTACCCAATTGGTCA 3756400
Query 178004 AGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 178063
||| ||| | |||| ||||||||| || || || || |||| || | |||| ||||
Sbjct 3756399 AGGAAGATTTTATGATGATATGCCTCTAGGAATTTCCAGTGCTTTCAATTTCATGATTGT 3756340
Query 178064 ATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCA 178102
||||||||| || ||||| ||||||||| | || || ||
Sbjct 3756339 ATTCCAAGCTGAGCACAACATCCTTATGTATCCATTGCA 3756301
>seq155
Length=2184526
Score = 127 bits (140), Expect = 2e-24
Identities = 343/516 (66%), Gaps = 18/516 (3%)
Strand=Plus/Minus
Query 178987 GGTTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACT 179046
||| |||| || | || || |||| ||| ||| | || | | |||||||| ||
Sbjct 253089 GGTCGGTCCGGTCAACTGCTCTTTCCTTGTGCATATTTCGCTTTAAGTGGTTGGCTCACA 253030
Query 179047 GGGACAGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGT 179106
|| ||| | ||||| || |||| || |||| | |||||||||||| | || ||
Sbjct 253029 GGTACAACCTTTGTAACTTCACGGTATACTCATGAATTGGCTAGTTCCTATTTGGACGGA 252970
Query 179107 GCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 179166
|||||| | || || || || | || |||| | || | | | ||| || | |
Sbjct 252969 TGTAACTTCTTAACCGCCGCAGTTTTTACTCCTGTTAATAGTTTAGCACATCCTTTGTTG 252910
Query 179167 CTACTTTGGGGTCCTGAGTCTCAGGG-GAATTTCCAGCGGTGGTGCCAACTTGGGGGACT 179225
|||| |||| || ||| | || || || ||| | | || ||| | || | |
Sbjct 252909 TTACTATGGGATCTTGATGCACAAGGAGATTTTAC-----TCATGTCAATTAGGCGATCC 252855
Query 179226 ATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTT 179285
|||| ||| ||||||||||| || || || ||||| || |||||| | ||||| ||
Sbjct 252854 GTGGACTTTTGTGGCTCTCCATGGCGCTTTTAAACTAATAGGTTTCATG-TACGTCAATT 252796
Query 179286 TGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTA 179344
|||||| || | ||| || | | || ||||| ||||| || | || |||||| |
Sbjct 252795 TGAACTTGCTCAATCTGTTCAAT-TGCGACCTTATAATGCAATCACATTCTATGGTCCAA 252737
Query 179345 TTGCCGTATTCGTTAGTGTATTTCTCA-TCTACCCACTTGGACAATCCAGTTGGTTCTTT 179403
||| || || |||| | |||| | || || || || || |||||||||||||||
Sbjct 252736 TTGTTGTTTT------TGTACT-CTCAATTTATCCGCTAGGTCAGTCCAGTTGGTTCTTT 252684
Query 179404 GCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCAC 179463
|| || |||||| | || || || ||| | || | ||| || ||||| || ||
Sbjct 252683 GCACCTAATTTTGGTATAGCAGCTATATTTTGCTTTATCATTTCTTTCCAAGGGTTTCAT 252624
Query 179464 AACTGGACACTCAACCCCTTTCACATGATGGGAGTT 179499
| ||||| | ||||| ||||| ||||| ||||||
Sbjct 252623 TATCGGACATTGAACCCATTTCAAATGAT-GGAGTT 252589
>seq77
Length=8408033
Score = 123 bits (136), Expect = 3e-23
Identities = 209/303 (69%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 177663 TTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 177722
||| | |||||||| || | || || || || || || |||| | | | || ||
Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754
Query 177723 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTT 177782
| ||||| ||||| || ||||| ||||| || | ||| |||| || || ||| |
Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTG 2698814
Query 177783 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 177842
|| | || || || | |||||| ||||| ||||||| ||| | || ||||| ||||||
Sbjct 2698815 CATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCT 2698874
Query 177843 TTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGG 177902
| | || | || | |||||| | | || | | || ||||| |||||||||
Sbjct 2698875 TATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 2698934
Query 177903 GAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTT 177962
|||||| | |||||||||||| || | ||||| ||||||||| || || ||||||
Sbjct 2698935 GAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 2698994
Query 177963 GCA 177965
|||
Sbjct 2698995 GCA 2698997
>seq151
Length=2833985
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 178236 GAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATAT 178295
|||||||| ||||| ||||| || || |||||||| || || || |||||||||| ||||
Sbjct 2328018 GAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCTATAT 2328077
Query 178296 GCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGC 178339
|| |||||||| || ||||| | ||||||||||| || ||
Sbjct 2328078 GCTAGTTTCAACAATTCTCGTTCGTTACACTTCTTCCTAGCTGC 2328121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605391803124160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |