Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq49 181 2e-40
seq203 167 5e-36
seq652 154 3e-32
>seq49
Length=4798478
Score = 181 bits (200), Expect = 2e-40
Identities = 179/229 (78%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| |||| ||||||||| ||||| ||||| || |||||||| || |||||||| |
Sbjct 2870140 CCTCCCCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCC 2870081
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | ||||| |||||||| ||||| |||||||| || || || || ||||| || ||
Sbjct 2870080 AGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2870021
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| ||||| || || ||||| |||||||| ||||| || || || ||| || | || ||
Sbjct 2870020 ATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCAG-AGCTCTCAAC 2869962
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||||||| || || || || || | ||||| ||||| || ||||||
Sbjct 2869961 TTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCATT 2869913
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| ||| || || || || || || ||||| ||||| || ||||||||||
Sbjct 2840628 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 2840569
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||| || || || || || || |||||||| || || || || ||||| ||
Sbjct 2840568 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2840509
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||||||||||||||| || || ||||| |||||||| ||| ||| ||
Sbjct 2840508 ATTCCCTCCTTATCTTGAATCTTGGCCTTGACATTATCAATCGTGTCAGAGCTTTCAACC 2840449
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | ||||| ||||| ||||||||
Sbjct 2840448 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2840402
Score = 158 bits (174), Expect = 2e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| |||| |||||||| ||||| ||||| || |||||||| || || ||||| |
Sbjct 2841084 CCTCCCCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCCGCC 2841025
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | ||||| |||||||| ||||| || ||||| || || || || ||||| || ||
Sbjct 2841024 AAAGTCCTACCATCTTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2840965
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| |||||||| || ||||| || ||||| || || || || || ||| || | || ||
Sbjct 2840964 ATGCCTTCCTTGTCCTGAATTTTCGCTTTGACGTTGTCGATGGTGTCAG-AGCTCTCAAC 2840906
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||||||| || || || || || | ||||| ||||| || ||||||
Sbjct 2840905 TTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCATT 2840857
Score = 158 bits (174), Expect = 2e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||| | |||| |||||||| ||||| ||||| || || ||||| || || ||||| |
Sbjct 2847072 CCTGCCCTCAGGCGCAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCC 2847013
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | ||||| |||||||| ||||| |||||||| || || || || ||||| || ||
Sbjct 2847012 AAAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2846953
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| |||||||| || ||||| |||||||| || || || || || ||| || | || ||
Sbjct 2846952 ATGCCTTCCTTGTCCTGAATTTTTGCTTTGACGTTGTCGATGGTGTCAG-AGCTCTCAAC 2846894
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||||||| || || || || || | ||||| ||||| || ||||||
Sbjct 2846893 TTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTCACAAAAATTTGCATT 2846845
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| ||||| || |||||||| || ||||| |||| | | | || ||
Sbjct 2847517 ACGGAGGACCAAGTGTAGAGTCGACTCTTTCTGGATGTTATAGTCAGCCAAAGTCCTCCC 2847458
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || || || |||||||| || || || || || || || || || |||||
Sbjct 2847457 GTCTTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTT 2847398
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || ||||| || || ||||| ||||| || || | || ||||||||||| ||
Sbjct 2847397 ATCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAACTCTCCACTTCCAAAGTGAT 2847338
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| ||||| ||||||||
Sbjct 2847337 GGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 2847302
Score = 147 bits (162), Expect = 4e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| ||||| || |||||||| || ||||| |||| | | | || ||
Sbjct 2841529 ACGGAGGACCAAGTGTAGAGTCGACTCTTTCTGGATGTTATAGTCAGCCAAAGTCCTCCC 2841470
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || || || |||||||| || || || || || || || || || |||||
Sbjct 2841469 GTCTTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTT 2841410
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || ||||| || || || || ||||| || || | || ||||||||||| ||
Sbjct 2841409 ATCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCTGAACTCTCCACTTCCAAAGTGAT 2841350
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| ||||| ||||||||
Sbjct 2841349 AGTCTTTCCGGTCAGGGTCTTGACAAAGATCTGCAT 2841314
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| ||| || || || || || || ||| | ||||| || ||||||||||
Sbjct 2846617 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATCCCTTCTGGATGTTATAATCAGCC 2846558
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||| || || || || || | |||||||| || || || || ||||| ||
Sbjct 2846557 AGGGTGCGACCATCCTCGAGCTGCTTGCTTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2846498
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||||||||||||||| || || ||||| || ||||| || ||| ||
Sbjct 2846497 ATTCCCTCCTTATCTTGAATCTTGGCCTTAACATTATCGATCGTGTCGGAGCTTTCAACC 2846438
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | ||||| ||||| ||||||||
Sbjct 2846437 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2846391
Score = 136 bits (150), Expect = 8e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| ||||| || || ||||| ||||| || || ||||||| | | | | ||
Sbjct 2869444 CGAAGAACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGTGCGCCCA 2869385
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || ||||| || || ||||| ||||| |||||
Sbjct 2869384 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCAGGAGGGATTCCCTCCTTG 2869325
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| || |||||||| || || || || | || || || | || ||
Sbjct 2869324 TCTTGAATCTTGGCCTTTACATTGTCGATTGTGTCTGAACTCTCAACCTCAAGGGTGATG 2869265
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | || || ||||| ||||||||
Sbjct 2869264 GTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCAT 2869230
Score = 136 bits (150), Expect = 8e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| ||||| || || ||||| ||||| || || ||||||| || | | ||
Sbjct 2869672 CGAAGAACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAGGGTGCGCCCA 2869613
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || || || || || ||||| ||||| |||||
Sbjct 2869612 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTG 2869553
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| || || ||||| |||| ||| || ||| || || | || ||
Sbjct 2869552 TCTTGAATCTTGGCCTTGACATTATCAACCGTGTCCGAGCTTTCAACCTCAAGGGTAATG 2869493
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||| ||||||||
Sbjct 2869492 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2869458
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| ||| || || || || || || ||||| || || || || |||||||
Sbjct 2846206 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 2846147
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || || || ||||||||||| || || || || || |||||
Sbjct 2846146 AGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 2846087
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| || || ||||||||||| || || ||||| |||||||| || ||| ||
Sbjct 2846086 ATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACC 2846027
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | ||||| ||||| ||||||||
Sbjct 2846026 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2845980
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| ||||| || || ||||| || || || || ||||||| || | | ||
Sbjct 2840388 CGAAGAACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGCCAGGGTGCGCCCA 2840329
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || || || || || ||||| ||||| |||||
Sbjct 2840328 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTG 2840269
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| || || ||||| |||| ||| || ||| || || | || ||
Sbjct 2840268 TCTTGAATCTTGGCCTTGACATTATCAACCGTGTCCGAGCTTTCAACCTCGAGGGTAATG 2840209
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||| ||||||||
Sbjct 2840208 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2840174
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||||||| || || ||||| || || ||||| || || || || || || | |
Sbjct 2869912 CCTCCTCTCAAACGGAGGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCCGCT 2869853
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || ||||| ||||||||||| || | | || || ||||| ||
Sbjct 2869852 AGTGTCCGGCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCGCTGCTGGTCTGGGGGA 2869793
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || ||||| ||||| ||||| | || ||
Sbjct 2869792 ATCCCTTCTTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCGGAACTCTCCACC 2869733
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 2869732 TCAAGAGTAATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 2869686
Score = 125 bits (138), Expect = 1e-23
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||| || || | || || || || || || || ||||| ||||| |
Sbjct 2841312 CCACCACGCAGACGGAGGACAAGATGGAGCGTCGACTCCTTTTGAATATTGTAATCGGCC 2841253
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || ||||| || ||||| || | | || || ||||| ||
Sbjct 2841252 AGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGA 2841193
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| |||||||| || || ||||| ||||| ||||| |||||||| || || | || ||
Sbjct 2841192 ATGCCTTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCG-AGCTCTCGAC 2841134
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||| || |||||||| |||| ||||| ||||| ||||||||
Sbjct 2841133 TTCCAAAGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCAT 2841086
Score = 122 bits (134), Expect = 2e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || ||||| || || ||||| ||||| || || ||||||| | | | | ||
Sbjct 2840160 CGAAGGACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGTGCGCCCA 2840101
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || ||||| || || |||| ||||| |||||
Sbjct 2840100 TCCTCGAGCTGCTTACCAGCAAAGATGAGCCTTTGCTGGTCAGGAGTGATTCCCTCCTTG 2840041
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| || |||||||| || || || || | || || || | || ||
Sbjct 2840040 TCTTGAATCTTGGCCTTTACATTGTCGATTGTGTCTGAACTCTCAACCTCAAGGGTGATG 2839981
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | || || ||||| || |||||
Sbjct 2839980 GTCTTGCCAGTAAGAGTTTTCACAAAGATTTGCAT 2839946
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||| | ||| || || ||||| || || ||||| || || || || || || |
Sbjct 2840856 CCTCCTCTGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCA 2840797
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || || || || || || ||||||||||| | | || || ||||| ||
Sbjct 2840796 AGCGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCTGGGGGG 2840737
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || || || || || ||||| ||||| ||||| | || ||
Sbjct 2840736 ATCCCTTCTTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGTATCGGAACTCTCGACC 2840677
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 2840676 TCCAGAGTAATTGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 2840630
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || ||||| || || ||||| ||||| || || ||||||| | | | | ||
Sbjct 2845966 CGAAGGACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGTGCGCCCA 2845907
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || ||||| || || || || ||||| |||||
Sbjct 2845906 TCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCAGGGGGAATTCCCTCCTTG 2845847
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| ||||| || |||||||| ||||| || || | || || || | || ||
Sbjct 2845846 TCTTGTATCTTGGCCTTTACATTGTCAATTGTGTCTGAACTCTCAACCTCAAGGGTGATG 2845787
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | || || || || || |||||
Sbjct 2845786 GTCTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT 2845752
Score = 96.9 bits (106), Expect = 7e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || ||||| || || || || || || || || | || | | ||
Sbjct 2870357 ACGGAGGACCAGATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCCAGTGTCCGGCC 2870298
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || ||||| || || || || || | | || || || || || || ||||||||
Sbjct 2870297 ATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGGAATGCCTTCCTT 2870238
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773
||| || ||||| | || ||||| || ||||| ||| || | || |||||||| || |
Sbjct 2870237 ATCCTGTATCTTCGACTTGACATTATCGATCGTGTCA-GAGCTCTCCACTTCCAAGGTGA 2870179
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || | ||||| ||||| ||||||||
Sbjct 2870178 TAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCAT 2870142
>seq203
Length=8626763
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||||||| || || ||||| |||||||| |||||||| || ||||| || |
Sbjct 5730612 CCACCCCTCAAACGGAGCACCAAGTGGAGAGTAGACTCTTTCTGGATGTTATAGTCTGCA 5730553
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | || || ||||| || || || ||||| ||||| ||||| || || || || ||
Sbjct 5730552 AGAGTCCTGCCATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGGGGA 5730493
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| |||||||| || || || ||||| ||||| || || ||| |||
Sbjct 5730492 ATACCCTCCTTGTCTTGAATTTTCGCCTTAACATTGTCAATGGTGTCCGAGCTTTCCACT 5730433
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| ||||| || || | |||||| || || ||||||||
Sbjct 5730432 TCCAAAGTTATGGTCTTCCCGGTAAGCGTCTTCACGAAAATCTGCAT 5730386
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | ||| || || ||||| || ||||| || ||||| || |||||||| |
Sbjct 5730156 CCTCCCCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 5730097
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| ||| || ||||| || || || ||||||||||| || || || || || |||||
Sbjct 5730096 AAGGTTCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 5730037
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| |||||||| |||||||||||||| || || || || ||| ||
Sbjct 5730036 ATCCCTTCCTTGTCTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCACC 5729977
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | || || ||||| || |||||
Sbjct 5729976 TCAAGGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCAT 5729930
Score = 125 bits (138), Expect = 1e-23
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | |||||| || || ||||| || || ||||||||||| || || || || |
Sbjct 5730384 CCACCCCGCAAACGGAGCACCAAGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCCGCA 5730325
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || ||||| || || ||||| ||||| || || || || || || || ||
Sbjct 5730324 AGCGTCCTGCCATCTTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCCGGTGGA 5730265
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| || ||||| ||||| ||||| || || ||||| ||||| || ||| || | || ||
Sbjct 5730264 ATACCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCA-GAGCTCTCAAC 5730206
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| | || || ||||| || || | ||||| ||||| || |||||
Sbjct 5730205 TTCTAGGGTAATTGTCTTCCCAGTGAGGGTCTTCACAAAGATTTGCAT 5730158
>seq652
Length=2384379
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||| || || ||||||||||| || |||||||| || |||||||| |
Sbjct 465740 CCACCACGCAGACGAAGGACCAAGTGCAGAGTTGACTCTTTCTGGATGTTATAATCGGCC 465681
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || |||||||| ||||| || || ||||| || || || || || ||||||||
Sbjct 465680 AGTGTCCTTCCGTCTTCCAGTTGCTTCCCGGCAAAAATCAGCCTCTGCTGGTCTGGAGGG 465621
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || |||||||| || ||||| || || || || | || ||
Sbjct 465620 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGAACTCTCCACC 465561
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||| ||| || ||||| || |||| ||||| ||||| |||||||||
Sbjct 465560 TCCAGAGTGATGGTCTTTCCGGTCAGAGTCTTGACAAAAATCTGCATT 465513
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||| | ||| || || ||||| || || ||||| ||||| ||||| || || |
Sbjct 464828 CCACCTCTGAGACGAAGCACCAAGTGAAGTGTTGATTCCTTCTGGATATTGTAGTCTGCC 464769
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | ||||| || || || || || || || || || | ||||| |||||||| ||
Sbjct 464768 AGGGTCCTACCATCCTCAAGCTGCTTGCCTGCGAAAATCAACCTTTGCTGATCTGGGGGA 464709
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||| || || || || || |||||||| || || || || | ||| ||
Sbjct 464708 ATTCCCTCCTTGTCCTGGATTTTCGCCTTTACATTATCGATGGTGTCCGAACTTTCAACC 464649
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | ||||| ||||||||||||||
Sbjct 464648 TCTAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAATATCTGCAT 464602
Score = 127 bits (140), Expect = 4e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || ||||| | || | | || || || || ||
Sbjct 465488 TGTAGAGTTGACTCCTTTTGGATGTTGTAATCCGCCAGTGTCCGGCCATCCTCGAGCTGC 465429
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||||||| || | || || |||||||| || || |||||||| || || |||||
Sbjct 465428 TTCCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGTATCTTA 465369
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
||||| ||||| |||| ||||| || | || |||||||||||||| ||||| || ||
Sbjct 465368 GCTTTGACATTATCAACGGTATCCG-AGCTCTCGACTTCCAAAGTTATGGTCTTCCCGGT 465310
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
| ||||| ||||||||||||||
Sbjct 465309 AAGGGTCTTGACAAATATCTGCAT 465286
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || || | ||| ||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct 464600 CCACCCCTGAGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCC 464541
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | | || || || || || || ||||||||||| || || || || || || ||
Sbjct 464540 AAAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGG 464481
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||||||||| ||||| ||||| || || ||||| |||| || || | ||| ||
Sbjct 464480 ATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAACTGTGTCTGAACTTTCAACC 464421
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | || || || || || |||||
Sbjct 464420 TCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTGCAT 464374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981369602251464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |