Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq134 84.2 5e-11 >seq134 Length=15115857 Score = 84.2 bits (92), Expect = 5e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366 |||| |||||||| || | || ||||||||| | || || || |||||||||| Sbjct 13034276 GACACTTGAATGATGGAGACTTTGTGCTGTTCAATCGCCAGCCTAGCCTTCATAAAATGT 13034335 Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTG 305426 |||| |||| ||| | | | || | | | | ||| ||||| ||||| || || Sbjct 13034336 CTATAATGGGTCACAGAATTAAGATCATGCCATACTCGACTTTTCGTCTAAATTTATCTG 13034395 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | || || ||||| ||||||||||||||||||||||| ||||| || ||||| | Sbjct 13034396 TAACATCACCATACAATGCTGATTTTGATGGAGATGAAATGAACATGCACGTGCCTCAGT 13034455 Query 305487 C 305487 | Sbjct 13034456 C 13034456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186259665125336