Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 84.2 2e-11
>seq12
Length=4956709
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 148177 GTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGA 148236
||||| || ||| |||||||| || || || ||| || ||| |||||| ||
Sbjct 4012319 GTTCCTGCATTGAACAGGGTGGGGGAAGCATGAGTGAACCATCGCTGAGACATCATATGA 4012378
Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296
|| || | || || |||||||| || |||||| || | || || | ||| | |
Sbjct 4012379 TATGTTTTGATGGCAGAGTCGATGTCATCCTTGTGAATTCCAACAGCAACCCTCATCAAC 4012438
Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGG 148356
|||||||| |||| ||| |||| | | || ||| ||||| || | |||||
Sbjct 4012439 ATGTGCTGAGGTCTTTCCACAACCTTCCCTTGGACCTTCAGAAGGTAAGACCTCTCGAGT 4012498
Query 148357 GTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397
||||| |||||||||| | ||||||||||||| | || ||
Sbjct 4012499 GTTTTAAAACCAAAGTAGTCGTAATCAAAATCTCGGTCATA 4012539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476394484887360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |