Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 >seq12 Length=4956709 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 148177 GTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGA 148236 ||||| || ||| |||||||| || || || ||| || ||| |||||| || Sbjct 4012319 GTTCCTGCATTGAACAGGGTGGGGGAAGCATGAGTGAACCATCGCTGAGACATCATATGA 4012378 Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 || || | || || |||||||| || |||||| || | || || | ||| | | Sbjct 4012379 TATGTTTTGATGGCAGAGTCGATGTCATCCTTGTGAATTCCAACAGCAACCCTCATCAAC 4012438 Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGG 148356 |||||||| |||| ||| |||| | | || ||| ||||| || | ||||| Sbjct 4012439 ATGTGCTGAGGTCTTTCCACAACCTTCCCTTGGACCTTCAGAAGGTAAGACCTCTCGAGT 4012498 Query 148357 GTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 ||||| |||||||||| | ||||||||||||| | || || Sbjct 4012499 GTTTTAAAACCAAAGTAGTCGTAATCAAAATCTCGGTCATA 4012539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476394484887360