Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq444 567 8e-157 seq10427 506 2e-138 seq32303 365 5e-96 seq31551 279 6e-70 seq31730 219 5e-52 seq31523 196 5e-45 seq231 174 2e-38 seq111 167 3e-36 seq328 158 1e-33 seq85 143 3e-29 seq203 141 1e-28 seq155 138 1e-27 seq31544 125 8e-24 seq77 122 1e-22 seq151 87.8 2e-12 seq7573 86.0 7e-12 seq134 84.2 2e-11 >seq444 Length=4271 Score = 567 bits (628), Expect = 8e-157 Identities = 726/995 (73%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 ||||| | ||| ||||| || | ||||| || || | || ||||| || || || Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTC-ATCGTCGCCTTCGTCGCTGCTCC 160078 ||||| || || | ||| | ||||| ||||||| || |||| ||| | |||||||| Sbjct 1054 ATGATCCCTACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCC 996 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 995 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 936 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || || || ||||| || |||| |||| || ||||| | || || || || || Sbjct 935 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAAT 876 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 ||||||||| ||||| ||||||| ||||| || ||||| ||||||| |||| | || Sbjct 875 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGT 816 Query 160259 ATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 160318 | ||||| | | || | | |||||||| ||||||||||||||| | ||| Sbjct 815 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 756 Query 160319 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 160378 | | |||||||| || ||||| ||| |||||||| ||||| || || || || |||| Sbjct 755 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 696 Query 160379 TGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160438 ||| ||| | | ||||| | ||||| || ||| || |||| ||||||||| || || Sbjct 695 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 636 Query 160439 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160498 |||||||||||| |||| ||| |||||||||| || || ||||| || |||||||| || Sbjct 635 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 576 Query 160499 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 160558 || |||||| | || || ||||| |||||||| || || | || ||||||||| || Sbjct 575 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 516 Query 160559 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 160617 | || ||||| | | | || | ||||| || |||| || || || | | Sbjct 515 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 457 Query 160618 GTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCG 160677 |||| | ||||| ||||| ||||| || |||||||| || || || || ||||| || | Sbjct 456 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 397 Query 160678 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGG 160737 | || ||||| ||||||||||| |||||||| || ||||| | || |||||| | | Sbjct 396 GCCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 337 Query 160738 CAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 160797 | || ||||| ||||| || || ||||| |||||| | ||| |||| || ||||| |||| Sbjct 336 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 277 Query 160798 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACA 160857 |||| || |||||||| |||||||| || | | ||| ||||||| ||||| | || | Sbjct 276 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 217 Query 160858 CCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 160917 | ||||| || | | || |||||| ||||||||||||||||||||||| ||||| | Sbjct 216 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 157 Query 160918 CACACAACTTCCCACTCGACCTCGCTGCTGCTGAG 160952 | ||||||||||| || ||||| ||||||| |||| Sbjct 156 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 122 >seq10427 Length=4047 Score = 506 bits (560), Expect = 2e-138 Identities = 725/1019 (71%), Gaps = 2/1019 (0%) Strand=Plus/Plus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | || |||||| | |||| || ||||||||||| || |||||||| Sbjct 776 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 835 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | || |||| ||| ||| | ||| | || |||||| | || || ||||| || Sbjct 836 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 895 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 161867 | ||| |||||||| ||||| | || ||||||||| | || ||| || ||| | Sbjct 896 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 955 Query 161868 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 161926 || || ||||| ||||| ||| | | | | |||||| || || || || ||||| Sbjct 956 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 1014 Query 161927 TCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 161986 |||||| || ||||| ||||| || ||| ||| | || || || ||| |||||| Sbjct 1015 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 1074 Query 161987 GGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACG 162046 || ||||| || || ||||| |||| || || ||| | ||||| |||||||| || || Sbjct 1075 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 1134 Query 162047 TCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 162106 | || | || || || ||||| || || ||||||||||| |||||||||||||| Sbjct 1135 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 1194 Query 162107 CAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 162166 |||||||| || || ||| | ||||| || ||||||| || || || ||||| Sbjct 1195 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 1254 Query 162167 GGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAA 162226 || || || || ||| ||||| | | ||| | ||||| || ||||| ||||| |||| Sbjct 1255 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 1314 Query 162227 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCA 162286 ||| || |||||||||||||| || ||| |||| || | || || |||| |||||||| Sbjct 1315 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 1374 Query 162287 CGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 162346 || | || || |||||||| |||| || ||||| || ||||| || || || Sbjct 1375 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 1434 Query 162347 GTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 162406 ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 1435 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 1494 Query 162407 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 162466 || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||||| Sbjct 1495 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 1554 Query 162467 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 162526 || || | ||| |||||| || |||| | | ||| | ||| | ||||| || Sbjct 1555 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTAGCTTTGAACCTACG 1614 Query 162527 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTT 162586 ||| || || ||||| ||||| ||| | ||||| |||||||| || ||||| || || Sbjct 1615 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 1674 Query 162587 CTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCA 162646 ||| ||||| || ||||| | || ||||| | ||||| ||| | || || || || Sbjct 1675 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 1734 Query 162647 ACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 1735 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 1793 >seq32303 Length=834 Score = 365 bits (404), Expect = 5e-96 Identities = 506/703 (72%), Gaps = 4/703 (1%) Strand=Plus/Minus Query 161718 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 161777 || |||||||||||||| || ||||| || || | || |||| ||| ||| | || Sbjct 706 GACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCC 647 Query 161778 ATTGGCGGTTGGCTTACTGGCACAACTTTCGCAACGAGCTGGTATACCCATGGTCTCGCT 161837 | || |||||| | || || ||||| || | ||| |||||||||||||| | || Sbjct 646 TTAGGTGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCC 587 Query 161838 AGTTCCTATCTTGAGGG-TGCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGC 161896 ||||||||| | || || ||||| ||| | || || ||||| ||||| ||| | Sbjct 586 AGTTCCTATTTGGAAGGATGCAA-CTTCTTAACTGCCGCAGTTTCTACTCCTGCTAATAG 528 Query 161897 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCT 161955 | | | |||||| || || || || ||||||||||| || ||||| ||||| || | Sbjct 527 TTTAGCACATTCT-TTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTT 469 Query 161956 GGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTG 162015 || |||| | || || || |||| ||||||||| ||||| || || |||| ||||| | Sbjct 468 GGTGCCAATTAGGTGGTCTGTGGACTTTTGTGGCTCTCCACGGCGCTTTCGGACTAATAG 409 Query 162016 GATTCATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGCTA 162075 | |||||| | ||||| |||||||| || || | || | || || || ||||| | Sbjct 408 GTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAA 349 Query 162076 TTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTC 162135 | || || |||||||| |||||||||||||| || ||||| || || ||| | |||| Sbjct 348 TCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTC 289 Query 162136 AGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGT 162195 |||| ||||||| || || || ||||| || ||||| || ||| | ||| | | | Sbjct 288 AGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTCATCCTTT 229 Query 162196 TTCTTCAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTA 162255 || | ||||| || ||||| ||||| ||||||| || ||||||||||||||||| ||| Sbjct 228 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCCGGTG 169 Query 162256 TACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATACG 162315 || | || | || || |||| |||||||| || | || || |||||||| |||| | Sbjct 168 TATTGGGCGCTGCTCTCCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTG 109 Query 162316 AGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTT 162375 | ||||| || ||||| || || || ||| | | || || | ||||| |||| Sbjct 108 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTT 49 Query 162376 ATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 162418 |||| |||||||| || || ||||| ||||| || ||||| || Sbjct 48 ATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGG 6 >seq31551 Length=1713 Score = 279 bits (308), Expect = 6e-70 Identities = 266/341 (78%), Gaps = 6/341 (2%) Strand=Plus/Minus Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676 ||||| | ||||||||||| ||||| || || || ||||| || || |||||||| || Sbjct 1059 GGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 1000 Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTG 160736 || || ||||||||||||||||| ||||||| || ||||| | || |||||||| Sbjct 999 GGCCGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCCTTACATTTCTTCCTA 940 Query 160737 GCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 160796 || || ||||||||||| || ||||||||||||||| | ||| ||||||||||||| || Sbjct 939 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGGCTTTT 880 Query 160797 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTC------AAGGTCGTGTA 160850 || | ||||||||||| |||||||| || | | ||| ||| |||||| |||| Sbjct 879 CACTTAAACGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGAAAAGGTCATGTA 820 Query 160851 CTGAACACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAG 160910 | || |||||||| || | | || |||||| ||||||||||||||||||||||| Sbjct 819 ATTAATACCTGGGCTGATCTCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAA 760 Query 160911 CGTAACGCACACAACTTCCCACTCGACCTCGCTGCTGCTGA 160951 ||||| || || |||||||| || ||||| ||||||| ||| Sbjct 759 CGTAATGCTCATAACTTCCCCCTAGACCTAGCTGCTGTTGA 719 >seq31730 Length=297 Score = 219 bits (242), Expect = 5e-52 Identities = 210/269 (78%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 160290 ATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCA 160349 ||||| ||||||||||||||| | |||| | ||||||||||| ||||| ||| ||| Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCA 60 Query 160350 TATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAGGT 160409 ||||| ||||| || || || || ||||||| ||| | | || || | |||||||| Sbjct 61 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGA 120 Query 160410 TCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTC 160469 ||| || |||| ||||||||| || || ||||||||||| |||| |||| |||||||| Sbjct 121 AGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTC 180 Query 160470 CAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTC 160529 || || || ||||| ||||||||||| || || |||||| | ||||| ||||| |||||| Sbjct 181 CAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTC 240 Query 160530 GGTGGATCTTTGTTCTCTGCTATGCACGG 160558 || || || | ||| ||||||||| || Sbjct 241 GGCGGCTCCCTATTCAGTGCTATGCATGG 269 >seq31523 Length=225 Score = 196 bits (216), Expect = 5e-45 Identities = 164/201 (82%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676 ||||| | ||||||||||||||||| || || || ||||| || || |||||||| || Sbjct 25 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 84 Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTG 160736 || || ||||||||||||||||| |||||||| || ||||| | ||||||||||| Sbjct 85 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTA 144 Query 160737 GCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 160796 || || ||||||||||| || ||||||||||||||| | ||| | ||||| ||||| ||| Sbjct 145 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTC 204 Query 160797 AACCTCAACGGTTTCAACTTC 160817 ||||| || |||||||| ||| Sbjct 205 AACCTAAATGGTTTCAATTTC 225 >seq231 Length=1485859 Score = 174 bits (192), Expect = 2e-38 Identities = 228/316 (72%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 162366 GAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCG 162425 ||||| || ||||| |||||||| || || ||||| ||||| || ||||| || |||| Sbjct 476701 GAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 476642 Query 162426 TTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGG 162485 ||||| || || | ||| | ||||| || ||||| ||||| || || | ||| ||||| Sbjct 476641 TTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACCGGTTTATGG 476582 Query 162486 ACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGT 162545 | || |||| | | ||||| ||| | ||||| ||||| || | ||||| | Sbjct 476581 ATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAACTTCGTTTGC 476522 Query 162546 CAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTG 162605 ||||||||| | ||||||||||||||||| |||||||| ||||||| || || ||||| Sbjct 476521 CAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAAAATATTCTC 476462 Query 162606 CTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATC 162665 | || ||| | | |||| | | | || || || ||||| ||||| ||| |||| Sbjct 476461 TTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAAAACCTTATA 476402 Query 162666 TTCCCAGAAGAAGTTC 162681 || | || || |||| Sbjct 476401 TTTCTTGAGGAGGTTC 476386 >seq111 Length=3019079 Score = 167 bits (184), Expect = 3e-36 Identities = 208/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 162421 TTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTC 162480 |||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||| Sbjct 6799 TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 6740 Query 162481 TATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCG 162540 |||||| || |||| | | ||||| ||||| ||||| ||||| || || |||| Sbjct 6739 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCG 6680 Query 162541 TGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACA 162600 | ||||||||| | ||||| ||||||||||| |||||||| |||||||| || || | Sbjct 6679 TTTCCCAGGAGATCCGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATA 6620 Query 162601 TTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACT 162660 |||| | || ||||| | ||||| ||| | || || || || || ||||| ||| Sbjct 6619 TTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 6560 Query 162661 TTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 |||| ||||| || || ||||| || | || ||| | ||||||| Sbjct 6559 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACCCTCTTTAAT 6515 >seq328 Length=921196 Score = 158 bits (174), Expect = 1e-33 Identities = 201/277 (73%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 162386 CACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCT 162445 ||| || || ||||| ||||| || ||||| || |||| ||||| || || || ||| | Sbjct 671670 CACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTT 671611 Query 162446 TCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTAT 162505 ||||| || ||||| ||||| || || | ||| |||||| || |||| | | Sbjct 671610 ACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 671551 Query 162506 TGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGA 162565 ||||| ||||| ||||| ||||| || || ||||| ||||||||| | ||||| || Sbjct 671550 CGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAGATCCGTGCAGCGGA 671491 Query 162566 AGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGC 162625 ||||||||| |||||||| |||||||| || || ||||| | || |||| | ||||| Sbjct 671490 AGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTCTTAAACAAAGGTATTCGTGC 671431 Query 162626 ATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTT 162662 ||| | || || || || || ||||| ||| || Sbjct 671430 TTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTT 671394 >seq85 Length=5226098 Score = 143 bits (158), Expect = 3e-29 Identities = 135/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 160775 TGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGA 160834 |||| | ||||| ||||| |||||||| || |||||||| |||||||| ||| | | || Sbjct 1123354 TGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGA 1123295 Query 160835 TGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTAT 160894 | |||||||||||||| | || || |||| || | | ||| ||||| |||||||| Sbjct 1123294 TAGTCAAGGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTAT 1123235 Query 160895 GGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTGCT 160946 ||||||||||||||| |||| || || |||||||| || ||||| ||| || Sbjct 1123234 GGAAGTTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGCTACT 1123183 >seq203 Length=8626763 Score = 141 bits (156), Expect = 1e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 160287 TATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTA 160346 || ||||| ||||| ||||||| | |||| ||||||||||||| ||||| ||| Sbjct 3756518 TACATGGGTTATGAGTAGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTT 3756459 Query 160347 GCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAA 160406 |||||||| ||||| || || | || ||||||| ||| | | || || | |||||| Sbjct 3756458 GCATATTCAGCTCCGGTTGCAACTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 3756399 Query 160407 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 160466 || || | |||| ||||||||| || || || || |||| || | |||| ||||| Sbjct 3756398 GGAAGATTTTATGATGATATGCCTCTAGGAATTTCCAGTGCTTTCAATTTCATGATTGTA 3756339 Query 160467 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCA 160504 |||||||| || ||||| ||||||||| |||| || || Sbjct 3756338 TTCCAAGCTGAGCACAACATCCTTATGTATCCATTGCA 3756301 >seq155 Length=2184526 Score = 138 bits (152), Expect = 1e-27 Identities = 329/487 (68%), Gaps = 18/487 (4%) Strand=Plus/Minus Query 161765 TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTCGCAACGAGCTGGTATAC 161824 ||| ||| | ||| | | |||||||| || || ||||| || | ||| ||||||| Sbjct 253060 TGCATATTTCGCTTTAAGTGGTTGGCTCACAGGTACAACCTTTGTAACTTCACGGTATAC 253001 Query 161825 CCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCGTCAGTTAGCAC 161884 |||| | |||||||||||| | || || ||||| | || || ||||| || Sbjct 253000 TCATGAATTGGCTAGTTCCTATTTGGACGGATGTAACTTCTTAACCGCCGCAGTTTTTAC 252941 Query 161885 TCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGG 161943 ||| | | | | | | ||| || || || || || |||| || ||| || ||||| | Sbjct 252940 TCCTGTTAATAGTTTAGCACATCCT-TTGTTGTTACTATGGGATCTTGATGCACAAGGAG 252882 Query 161944 ATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCT 162003 |||| | | | | ||| | || | | |||| ||||||||| |||||||| || | Sbjct 252881 ATTT--TACTCATGT--CAATTAGGCGATCCGTGGACTTTTGTGGCTCTCCATGGCGCTT 252826 Query 162004 TCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTC 162063 | ||||| || |||||| | ||||| |||||||| || | | || | || | Sbjct 252825 TTAAACTAATAGGTTTCATG-TACGTCAATTTGAACTTGCTCAATCTGTTCAATTGCGAC 252767 Query 162064 CCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCT 162123 | || ||||| || | |||| |||||| |||| ||||||||| | || || | Sbjct 252766 CTTATAATGCAATCACATTCTATGGTCCAATTGTTGTTTTTGTACTC----TCA--ATTT 252713 Query 162124 ACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTA 162183 | || | ||||||||||||||||| || || || ||||| | ||||| || ||| Sbjct 252712 ATCCGCTAGGTCAGTCCAGTTGGTTCTTTGCACCTAATTTTGGTATAGCAGCTATATTTT 252653 Query 162184 GATTCCTGTTGTTTCTT--CAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGAT 162241 | || | | |||||| ||||| || ||| | |||| ||||||| || || ||||| Sbjct 252652 GCTT--TATCATTTCTTTCCAAGGGTTTCATTATCGGACATTGAACCCATTTCAAATGAT 252595 Query 162242 GGGAGTT 162248 |||||| Sbjct 252594 -GGAGTT 252589 >seq31544 Length=164 Score = 125 bits (138), Expect = 8e-24 Identities = 107/132 (81%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 160820 CCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCG 160879 ||| ||| | | ||| |||||||||||||| | || |||||||| || | | ||||| Sbjct 1 CCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 60 Query 160880 TGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCT 160939 |||| |||||||||||||||||||||||| ||||| || || |||||||| || ||||| Sbjct 61 TGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 120 Query 160940 CGCTGCTGCTGA 160951 ||||||| ||| Sbjct 121 AGCTGCTGTTGA 132 >seq77 Length=8408033 Score = 122 bits (134), Expect = 1e-22 Identities = 208/302 (69%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 160065 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 160124 ||| | |||||||| || | || || || || || || |||| | | | || || Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754 Query 160125 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTT 160184 | ||||| ||||| || ||||| ||||| || ||||| |||| || || ||| | Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTG 2698814 Query 160185 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 160244 || | || || || | |||||| ||||| ||||||| ||| | || ||||| |||||| Sbjct 2698815 CATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCT 2698874 Query 160245 TTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGG 160304 | | || | ||| | |||||| | | || | | || ||||| ||||||||| Sbjct 2698875 TATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 2698934 Query 160305 GAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTC 160364 |||||| | ||| |||||||| || | ||||| ||| |||||||| ||||| || Sbjct 2698935 GAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 2698994 Query 160365 GC 160366 || Sbjct 2698995 GC 2698996 >seq151 Length=2833985 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 160636 AGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAAT 160695 ||||||| || || || ||||| || || |||||||| || || || |||||||||| || Sbjct 2328016 AGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCTAT 2328075 Query 160696 ATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGC 160741 |||| |||||||| || ||||| | ||||||||||| || || Sbjct 2328076 ATGCTAGTTTCAACAATTCTCGTTCGTTACACTTCTTCCTAGCTGC 2328121 >seq7573 Length=101 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 160776 GGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGAT 160835 ||| | ||||| ||||| || ||||| || |||||||| |||||||| ||| | | ||| Sbjct 100 GGTATCAGCACTATGGCTTTAAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGAT 41 Query 160836 GGTCAAGGTCGTGTACTGAACACCTGGGCAGA 160867 |||||||||||||| | || |||||||| || Sbjct 40 AGTCAAGGTCGTGTAATTAATACCTGGGCTGA 9 >seq134 Length=15115857 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 160803 AACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGG 160862 || |||||| | ||||| || ||||| | ||| | |||||||||||| | || | || Sbjct 3767265 AATGGTTTCTATTTCAATCAATCCATAGTTGATAGCCAAGGTCGTGTAATTAATATGCGG 3767206 Query 160863 GCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACAC 160922 | || | | ||| ||||| |||||||| ||||||| ||||| ||||| || || Sbjct 3767205 GGTGATATTATTAATTGTGCTAACCTTGGTATAGAAGTTACACATGAACGTAATGCTCAT 3767146 Query 160923 AACTTCCCACTCGA-CCTCGCTGCTG 160947 |||||||| || || |||| ||||| Sbjct 3767145 AACTTCCCTCTAGACCCTCTTTGCTG 3767120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559249593531200