Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq161 93.3 1e-13
>seq161
Length=5110746
Score = 93.3 bits (102), Expect = 1e-13
Identities = 125/173 (72%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| |||||| || |||| || || ||||| || | || || |||||| ||
Sbjct 1384237 CTTCGCCGAGCGCCTCCTCGCCTTCGCCTGCGTCGAGGGCATCTTCTTCTCCGGCAGTTT 1384296
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
|| ||||||||||| | || ||||| || || |||| || || ||||| ||||
Sbjct 1384297 CTGCG-CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGGCTCACCTTCTCGAACG 1384355
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871
| || ||| ||||||||||| | || |||||||||||||| || ||||||
Sbjct 1384356 AGCTCATCTCCCGGGACGAGGGCCTCCACTGCGACTTCGCCTGCCTGCTCTAC 1384408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1587595728211320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |