Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq652 84.2 1e-11
>seq652
Length=2384379
Score = 84.2 bits (92), Expect = 1e-11
Identities = 141/200 (71%), Gaps = 8/200 (4%)
Strand=Plus/Minus
Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146
|| || ||||| || ||||| ||||| | | ||||| ||||| || | | ||| |
Sbjct 1152001 CGGGTACCAAATTGGCCATTCGGCATGAGAAGGTTAATGTTGTTGCTGCCTACATAATCC 1151942
Query 65147 TGAGCCATTCCGATAATTG--CT-GCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203
|||||||||||||| || | || ||| | ||| |||||||||||| ||| |||||
Sbjct 1151941 TGAGCCATTCCGATTATGGTACTAGCA---AGACTTTGTTCACCGTGATGGTATGCTGAA 1151885
Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263
|| || || ||||| ||| ||| || |||| || ||| | |||||| ||||
Sbjct 1151884 TGCTCGGATACATAACCAGAAAACTGGGCAATCTTCGCTTCTTTGACGAAATTCCTTTTG 1151825
Query 65264 AAT--GCAGAATACAATATT 65281
||| |||||| | ||| ||
Sbjct 1151824 AATGAGCAGAAAAGAATTTT 1151805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235575515396400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |