Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_029046.1
Length=50827
Score E
Sequences producing significant alignments: (Bits) Value
seq31086 84.2 7e-12
seq35365 82.4 2e-11
>seq31086
Length=5831
Score = 84.2 bits (92), Expect = 7e-12
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 21142 TTTCAAGTCGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGG 21201
||||| ||| ||||||||| |||||||||| ||||||||||| |||||| | ||
Sbjct 5404 TTTCAGCGCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGG 5463
Query 21202 TTCGAATCCTGTCTCCGCAAC 21222
||| |||||||||||||||||
Sbjct 5464 TTCAAATCCTGTCTCCGCAAC 5484
>seq35365
Length=745
Score = 82.4 bits (90), Expect = 2e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| ||||
Sbjct 638 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 697
Query 21210 CTGTCTCCGCAAC 21222
| |||||||||||
Sbjct 698 CCGTCTCCGCAAC 710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162454594974768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |