Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq87 179 3e-40
seq569 152 5e-32
seq22 149 6e-31
seq116 147 2e-30
seq203 131 2e-25
seq8789 113 4e-20
seq12 113 4e-20
seq652 109 5e-19
seq32873 102 8e-17
seq49 98.7 9e-16
seq88 89.7 5e-13
>seq87
Length=12262769
Score = 179 bits (198), Expect = 3e-40
Identities = 181/233 (78%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | || || || || ||| ||||||||| ||||| |||||||
Sbjct 7257202 CGCCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 7257261
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||||| || |||| |||||||||||||||||||| || |||||||| ||||||| ||
Sbjct 7257262 CGAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 7257321
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || |||||||||| ||| || |||| || | | | ||||||||||||||
Sbjct 7257322 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATGGTGTCGCTCGACTCG 7257380
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | ||||| || || ||||| || || || ||||| |||||||| ||
Sbjct 7257381 ACCTCGAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 7257433
>seq569
Length=4400913
Score = 152 bits (168), Expect = 5e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | || || || || || ||||||||| ||||| |||||||
Sbjct 2054699 CGCCGCCGCGGAGGCGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 2054758
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
||||||||| |||| |||||||||||||||||||| || |||||||| ||||||| |
Sbjct 2054759 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAG 2054818
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || ||| || ||| || | || || | ||| | | | |||||| ||||||
Sbjct 2054819 GGATGCCCTCTTTATCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCC 2054877
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || || || || ||||| || || || ||||| |||||||| ||
Sbjct 2054878 ACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2054930
Score = 152 bits (168), Expect = 5e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
||||||| || || || | || || || || || ||||||||| ||||| |||||||
Sbjct 2057950 CGCCGCCCCGGAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 2058009
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
||||||||| |||| |||||||||||||||||||| || |||||||| ||||| | |
Sbjct 2058010 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAG 2058069
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | || |||||||||| || | || || | ||| | | | |||||| ||||||
Sbjct 2058070 GGATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCC 2058128
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| | || || || || ||||| || || || ||||| |||||||| ||
Sbjct 2058129 ACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2058181
>seq22
Length=3960921
Score = 149 bits (164), Expect = 6e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||||||||| ||||||||||||| |
Sbjct 263111 CCTCCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCGGCG 263170
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| |||||||||||||||||||| ||||| ||||| ||||||| |||
Sbjct 263171 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 263230
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || |||| ||| | | | |||||| ||||||
Sbjct 263231 ATCCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAGCTCTCCAC 263289
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || || || || || || || ||||| ||||| |||||||||
Sbjct 263290 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 263338
Score = 131 bits (144), Expect = 2e-25
Identities = 157/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
|||||| || || || ||||||||| ||||| ||||||| ||||||||| | || ||
Sbjct 262672 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 262731
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||| |||||||| ||||| | ||| ||||||| ||||| | |||||||||| |
Sbjct 262732 GAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCC-T 262790
Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
| | || || | ||| | | | |||||| ||| ||||| | || || || |
Sbjct 262791 GGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCT 262850
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || |||| ||||| ||||| ||||||||
Sbjct 262851 TGCCAGTCAAGGTCTTGACGAAGATCTGCAT 262881
Score = 125 bits (138), Expect = 7e-24
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||| || || || || ||||||||| ||||| || || |
Sbjct 262427 CCACCGCGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 262486
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| |||||||||||||||||||| ||||| | ||| ||||| | |||
Sbjct 262487 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGG 262546
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| || ||| || | || | |||||| ||| |
Sbjct 262547 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAGCTCTCGA 262604
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| || || || || || || || ||||| || || |||||||||
Sbjct 262605 CCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 262654
Score = 113 bits (124), Expect = 4e-20
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||||||||| ||||| ||||||| |
Sbjct 262883 CCTCCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 262942
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| ||||||||||| || ||||| || || ||||| ||||||| ||
Sbjct 262943 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 263002
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | |||||||||| || | || || | ||| | | | ||||| ||| |||
Sbjct 263003 ATCCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGCT---CTC 263058
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || || || || || |||| ||||| ||||| ||||||||
Sbjct 263059 GACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 263109
>seq116
Length=10441785
Score = 147 bits (162), Expect = 2e-30
Identities = 177/234 (76%), Gaps = 10/234 (4%)
Strand=Plus/Minus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| ||||| || || | || || ||||| || ||||||||| || || |||||||
Sbjct 4726973 CGCCACCGCGGAGGCGGAGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGG 4726914
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752
||||||||| |||| ||||||||||| |||||||| || || ||||| || ||| |||
Sbjct 4726913 CGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGATCCGGCG 4726854
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGA 41808
||| | | |||||||||| ||| | || || | || | | | ||||| |||
Sbjct 4726853 GGATC-CCCTCCTTGTCC-TGAATCTTCGCCTTCACATTGTCGATCGTGTCCGAGCT--- 4726799
Query 41809 CTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||||||| ||| ||||| || || ||||| ||||| ||||| ||||||||
Sbjct 4726798 CTCCACCTCCAGCGTGATCGTCTTCCCTGTCAGGGTCTTCACGAAGATCTGCAT 4726745
Score = 141 bits (156), Expect = 9e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| || | | ||| || || |||||| ||||||||| ||||| || ||||
Sbjct 4712071 GCCTCCGCGGAGCCTGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGC 4712130
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| | |||| ||||||||||| |||||||| ||||| ||||| || || | ||
Sbjct 4712131 GAGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGAGG 4712190
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| || | || || | ||| | | | |||||| |||||
Sbjct 4712191 GATGCCCTCCTTGTCC-TGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 4712249
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| ||| || || || || ||||| ||||| ||||| |||||||||
Sbjct 4712250 CCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 4712299
Score = 141 bits (156), Expect = 9e-29
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || | | ||| || || |||||| ||||||||| ||||| |||||||
Sbjct 4712299 GCCTCCACGGAGCCTGAGCACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 4712358
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || |||| |||||||||||||||||||| || |||||||| || || | ||
Sbjct 4712359 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 4712418
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| || | || || | ||| | | | |||||| ||| |
Sbjct 4712419 GATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 4712477
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | ||| || || || || ||||| ||||| ||||| |||||||| ||
Sbjct 4712478 CCTCGAGCGTGATGGTCTTCCCGGTCAGGGTCTTGACGAAGATCTGCATCTT 4712529
Score = 141 bits (156), Expect = 9e-29
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| || | | ||| || || |||||| ||||||||| ||||| |||||||
Sbjct 4726288 GCCTCCGCGGAGCCTGAGCACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 4726229
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || |||| ||||||||||| |||||||| || |||||||| ||||||| ||
Sbjct 4726228 GAGGGTACGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 4726169
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||||| || | || || | ||| | | | |||||| ||| |
Sbjct 4726168 GATGCCTTCCTTGTCC-TGTATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 4726110
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | ||| | || || || ||||| ||||| ||||| |||||||| ||
Sbjct 4726109 CCTCGAGCGTGACGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATCTT 4726058
Score = 138 bits (152), Expect = 1e-27
Identities = 175/234 (75%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||||||||| || || | || || ||||| || ||||||||| || || || ||||
Sbjct 4711614 CGCCGCCGCGGAGGCGGAGGACAAGGTGCAGGGTAGACTCCTTCTGGATATTGTAATCGG 4711673
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG-CG 41752
||||||||| |||| || |||||||| |||||||| || || ||||| || |||| ||
Sbjct 4711674 CGAGGGTGCGACCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGATCCGGCG 4711733
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGA--- 41808
||| | | |||||||||| || || ||||| | | | | ||||| |||
Sbjct 4711734 GGATCCC-CTCCTTGTCCTGTATCTTCGCCTTCA-CATTGTCGATCGTGTC---CGAGCT 4711788
Query 41809 CTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||||||| ||| ||||| || || ||||| ||||| ||||| ||||||||
Sbjct 4711789 CTCCACCTCCAGCGTGATCGTCTTCCCGGTCAGGGTCTTCACGAAGATCTGCAT 4711842
Score = 129 bits (142), Expect = 5e-25
Identities = 170/232 (73%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | || || || |||||| ||||||||| ||||| || |||| |
Sbjct 4711844 CCTCCGCGGAGCCTCAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCG 4711903
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| | |||| ||||||||||| |||||||| ||||| ||||| || |||| ||
Sbjct 4711904 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 4711963
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| || |||||||||| || | || || | ||| | | ||||| ||| |||
Sbjct 4711964 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTATCGATCGTGTCCGAGCT---CTC 4712019
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| | ||| || ||||| || ||||| ||||| ||||| |||||||||
Sbjct 4712020 GACCTCGAGCGTGATGGTTTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 4712071
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| || || ||||| ||||||||| || || || |||| |||||| | |||| |||
Sbjct 4726497 ACGAGGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGGGTCCTACCGTCCTCG 4726438
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| || ||||| ||||| ||||| || |||| || | || |||||||||| ||
Sbjct 4726437 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCC-TG 4726379
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|||| || | ||| | | | |||||| ||| ||||| | ||| || || ||
Sbjct 4726378 GATTTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGCGTGATGGTCTT 4726319
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| ||||| ||||| ||||| |||||||||
Sbjct 4726318 CCCGGTCAGGGTCTTGACGAAGATCTGCATG 4726288
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | || || || ||||| ||| ||||| ||||| || |||| |
Sbjct 4726743 CCTCCGCGGAGCCTCAGGACGAGGTGGAGCGTCGACTCTTTCTGGATGTTGTAATCGGCG 4726684
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| | |||| ||||||||||| |||||||| ||||| ||||| || |||| ||
Sbjct 4726683 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 4726624
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| || |||| || | ||| | | | |||||| ||| ||
Sbjct 4726623 ATGCCCTCCTTATCC-TGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGAC 4726565
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | ||| || || || || || || ||||| ||||| |||||||||
Sbjct 4726564 CTCGAGCGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATG 4726516
>seq203
Length=8626763
Score = 131 bits (144), Expect = 2e-25
Identities = 170/231 (74%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||| || ||||| ||||||||||||||| ||||| |
Sbjct 5731068 CCCCCACGAAGGCGGAGCACCAGGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCAGCA 5731009
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| | | | || || |||||||| |||||||| ||||| | ||||||||||| ||
Sbjct 5731008 AGGGTCCTCCCATCCTCCAGCTGCTTACCGGCGAAGATCAGTCTCTGTTGGTCCGGTGGG 5730949
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811
| | ||||||||| ||| ||| ||| | | | | | ||||| ||| |||
Sbjct 5730948 ATCCCCTCCTTGTCTTGGATCTTTGCCTTAACATTATCA-ATCGTGTCCGAGCT---CTC 5730893
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || ||||| |||||||| ||||| || |||||||||||
Sbjct 5730892 GACCTCCAAGGTGATGGTTTTTCCCGTCAGGGTCTTGACAAAAATCTGCAT 5730842
Score = 111 bits (122), Expect = 1e-19
Identities = 159/220 (72%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706
||| | ||||| || || || ||| ||||| ||||||||||| | || || | |
Sbjct 5730601 ACGGAGCACCAAGTGGAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTGCC 5730542
Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766
|| || ||||||||||| ||||| || || | ||| ||||||| ||||| | ||||||
Sbjct 5730541 ATCTTCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGGGGAATACCCTCCTT 5730482
Query 41767 GTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCG 41822
|| | ||| |||| || | ||| | | | ||||| ||| ||||| |||| |
Sbjct 5730481 GT-CTTGAATTTTCGCCTTAACATTGTCAATGGTGTCCGAGCT---TTCCACTTCCAAAG 5730426
Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || |||||||| ||||||||||||||
Sbjct 5730425 TTATGGTCTTCCCGGTAAGCGTCTTCACGAAAATCTGCAT 5730386
Score = 95.1 bits (104), Expect = 1e-14
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| || || || |||||||||||||||||| |||| | ||| ||
Sbjct 5730147 AGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAGGTTCGG 5730088
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGGAACGCTCTC 41763
| || || ||||||||||| || || || || | ||| |||||| | |||| | || ||
Sbjct 5730087 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCT-TC 5730029
Query 41764 CTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCG 41822
||||| | ||| ||||||||| || | | |||||| |||||||| | |
Sbjct 5730028 CTTGT-CTTGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCACCTCAAGGG 5729970
Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || || || ||||| || || || || || || |||||
Sbjct 5729969 TGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCAT 5729930
>seq8789
Length=1270
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || || || ||| ||||||||| ||||| ||||||| ||| ||||| |||| ||
Sbjct 618 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTC 677
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||||||||||| |||| |||| ||||||| || | | |||||||||| |
Sbjct 678 AAGCTGCTTGCCGGCGAAGATCAAATGCTGCTGGTCCGGCGGTATCCCCTCCTTGTCC-T 736
Query 41773 GATTTTTTGCTTCAACGACG-ACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
| | || || | ||| | | |||| | ||||||||| | || || || |
Sbjct 737 GGATCTTGGCCTTGACGTTGTGAATGGTGTTGGAGCTCTCCACCTCGAGGGTGATGGTCT 796
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || || || ||||| ||||| ||||||||
Sbjct 797 TCCCGGTGAGGGTCTTAACGAAGATCTGCAT 827
>seq12
Length=4956709
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || || || ||| ||||||||| ||||| ||||||| ||| |||| ||| ||
Sbjct 1012994 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCATGCGGCAGTCCTC 1012935
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|||||||||||||||||| |||| |||| ||||||| || | | |||||||||| |
Sbjct 1012934 GAGCTGCTTGCCGGCGAAGATCAAATGCTGCTGGTCCGGCGGTATCCCCTCCTTGTCC-T 1012876
Query 41773 GATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
| | || || | ||| | || |||| | ||||||||| | || || || |
Sbjct 1012875 GGATCTTGGCCTTGACGTTGTGACTGGTGTTGGAGCTCTCCACCTCGAGGGTGATGGTCT 1012816
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || || || ||||| ||||| ||||||||
Sbjct 1012815 TCCCGGTGAGGGTCTTAACGAAGATCTGCAT 1012785
>seq652
Length=2384379
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||| ||||| || ||| ||||| |||||||| ||||
Sbjct 465741 GCCACCACGCAGACGAAGGACCAAGTGCAGAGTTGACTCTTTCTGGATGTTATAATCGGC 465682
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || | |||| || || ||||| ||||| || ||||| | ||| ||||| | ||
Sbjct 465681 CAGTGTCCTTCCGTCTTCCAGTTGCTTCCCGGCAAAAATCAGCCTCTGCTGGTCTGGAGG 465622
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| ||| ||||| | | | | ||||| |||||
Sbjct 465621 GATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CATTGTCGATGGTGTCTGAACTCTCCA 465563
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || || ||||| ||||| || |||||||||||
Sbjct 465562 CCTCCAGAGTGATGGTCTTTCCGGTCAGAGTCTTGACAAAAATCTGCAT 465514
>seq32873
Length=187
Score = 102 bits (112), Expect = 8e-17
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || || || ||| ||||||||| ||||| ||||||| ||| ||||| |||| ||
Sbjct 3 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTC 62
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||||||||||| |||| |||| ||||||| || | | ||||||||||
Sbjct 63 AAGCTGCTTGCCGGCGAAGATCAAATGCTGCTGGTCCGGCGGTATCCCCTCCTTGTCCTG 122
Query 41773 GATTTT 41778
||| ||
Sbjct 123 GATCTT 128
>seq49
Length=4798478
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||| ||||| ||||||||||| |
Sbjct 2841540 CCACCACGGAGACGGAGGACCAAGTGTAGAGTCGACTCTTTCTGGATGTTATAGTCAGCC 2841481
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | | |||| ||||||||||| ||||| || ||||| | ||| ||||| | ||
Sbjct 2841480 AAAGTCCTCCCGTCTTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGTGGG 2841421
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| || |||| ||| | | | ||||| ||||||
Sbjct 2841420 ATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACGTTGTCAATGGTGTCTGAACTCTCCAC 2841362
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || || ||||| ||||| || || ||||||||
Sbjct 2841361 TTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTGACAAAGATCTGCAT 2841314
Score = 98.7 bits (108), Expect = 9e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||| ||||||||||| ||||| | | || | | |||| ||||| ||||| ||||| ||
Sbjct 2870561 CTCTTTCTGAATGTTGTAGTCAGCCAAAGTCCTCCCGTCCTCGAGTTGCTTCCCGGCAAA 2870502
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
||||| | ||| ||||||| || | || |||||| ||| ||| || |||| |||
Sbjct 2870501 GATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACGT 2870443
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | | ||||| ||||||||||| || || || || || ||||| ||||| |
Sbjct 2870442 TGTCGATGGTGTCTGAACTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGA 2870383
Query 41850 CGAAAATCTGCAT 41862
| || ||||||||
Sbjct 2870382 CAAAGATCTGCAT 2870370
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || ||||| ||||| |||||| ||||| || || ||||
Sbjct 2841312 CCACCACGCAGACGGAGGACAAGATGGAGCGTCGACTCCTTTTGAATATTGTAATCGGCC 2841253
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || |||||||| || || || || |||| ||||| ||||| | ||||
Sbjct 2841252 AGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGA 2841193
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811
| || ||||||||| || | || |||| || || ||||| ||| |||
Sbjct 2841192 ATGCCTTCCTTGTCC-TGTATCTTCGCTTTGACATTATCAATCGTGTC---CGAGCTCTC 2841137
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| |||| || || || || || ||||| ||||| || ||||||||||||
Sbjct 2841136 GACTTCCAAAGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCATG 2841085
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||| ||||| ||||||||||| |
Sbjct 2847528 CCACCACGGAGACGGAGGACCAAGTGTAGAGTCGACTCTTTCTGGATGTTATAGTCAGCC 2847469
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | | |||| ||||||||||| ||||| || ||||| | ||| ||||| | ||
Sbjct 2847468 AAAGTCCTCCCGTCTTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGTGGG 2847409
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| || |||| || | | | ||||| ||||||
Sbjct 2847408 ATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTGTCAATGGTGTCTGAACTCTCCAC 2847350
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || || ||||| ||||| || || ||||||||
Sbjct 2847349 TTCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 2847302
Score = 86.0 bits (94), Expect = 6e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || ||| |||||||| |||||||| || | ||||||||
Sbjct 2840619 AGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAGGGTGCGA 2840560
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || |||||||||||||| || || || || | ||| ||||| | ||| | | ||||
Sbjct 2840559 CCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCC 2840500
Query 41765 TTGTC 41769
|| ||
Sbjct 2840499 TTATC 2840495
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || ||| ||||||| |||||||| || | ||||||||
Sbjct 2846608 AGACGAAGCACCAAATGGAGGGTGGATCCCTTCTGGATGTTATAATCAGCCAGGGTGCGA 2846549
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || ||||||||||||| || || || || | ||| ||||| | ||| | | ||||
Sbjct 2846548 CCATCCTCGAGCTGCTTGCTTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCC 2846489
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823
|| | | ||| | || || | ||| | | |||||| || ||||| | ||
Sbjct 2846488 TTAT-CTTGAATCTTGGCCTTAACATTATCGATCGTGTCGGAGCTTTCAACCTCGAGGGT 2846430
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || || || ||||| || || |||||||||
Sbjct 2846429 AATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2846390
>seq88
Length=6199832
Score = 89.7 bits (98), Expect = 5e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| || ||||| ||||||| ||||| || | | || |||||||||||||||||
Sbjct 5458663 CTCCTTTTGGATGTTGTAGTCGGCAAGGGTCCGGCTGCCCTCCAGCTGCTTGCCGGCGAA 5458722
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| |||||||| ||||||| || | || |||||||||
Sbjct 5458723 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 5458761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462093790371200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |