Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq40 100 2e-16 >seq40 Length=1372308 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || || ||| || |||||||||||||||||||| || || ||||| ||| Sbjct 1240797 CAGTTTTATGTAGCGAATGGGGAGTTGTCGTGTCAAATGTATCAGCGCTCTGCTGACATG 1240856 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || || ||||| || ||||||||| ||||| || || || | |||||||| ||| Sbjct 1240857 GGCCTTGGCGTTCCATTTAATATTGCATCATATGCTCTTCTGACATGCATGATTGCTCAT 1240916 Query 20551 GTT 20553 ||| Sbjct 1240917 GTT 1240919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399178881962140