Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq52 89.7 1e-12 >seq52 Length=1204374 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || ||||| | |||| ||||||||| ||||| | || || ||| | || || Sbjct 503562 GACTTTGATTACGACTATTTTGGTTTCAAAACTCTGGAAAGGTCATACCTCTTGAAGGTT 503503 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || ||| ||||||| | |||||||||| | ||| | || ||||| || |||||| Sbjct 503502 CAGGGGAAGGTCGTGGAGAGGCCTCAGCACATGCTTATGAGGGTTGCTGTTGGTATTCAC 503443 Query 248929 AAGGATGACATAGAGAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGA 248986 |||||||| || || | | ||| || | || ||| | ||| | |||| ||| | | Sbjct 503442 AAGGATGATATTGA-ATC-TGCTATCAAAACATACCACACTATGTCTCAACGGTGGTTTA 503385 Query 248987 CACATGCCACACCGACGCTCTTCAACGCCGGTACC 249021 | ||||| | || || || |||||| | || ||| Sbjct 503384 CTCATGCATCTCCCACCCTTTTCAACTCTGGAACC 503350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073751926971136