Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq52 89.7 1e-12
>seq52
Length=1204374
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
|| || || ||||| | |||| ||||||||| ||||| | || || ||| | || ||
Sbjct 503562 GACTTTGATTACGACTATTTTGGTTTCAAAACTCTGGAAAGGTCATACCTCTTGAAGGTT 503503
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
| || ||| ||||||| | |||||||||| | ||| | || ||||| || ||||||
Sbjct 503502 CAGGGGAAGGTCGTGGAGAGGCCTCAGCACATGCTTATGAGGGTTGCTGTTGGTATTCAC 503443
Query 248929 AAGGATGACATAGAGAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGA 248986
|||||||| || || | | ||| || | || ||| | ||| | |||| ||| | |
Sbjct 503442 AAGGATGATATTGA-ATC-TGCTATCAAAACATACCACACTATGTCTCAACGGTGGTTTA 503385
Query 248987 CACATGCCACACCGACGCTCTTCAACGCCGGTACC 249021
| ||||| | || || || |||||| | || |||
Sbjct 503384 CTCATGCATCTCCCACCCTTTTCAACTCTGGAACC 503350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073751926971136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |