Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 1e-12 >seq6 Length=5093711 Score = 87.8 bits (96), Expect = 1e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22795 GCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTG 22854 ||||||||||||||||||||||| || |||||||| ||| | || || ||||| ||| Sbjct 4852136 GCCATATTCTGGCTGAAGAAACGAGGCCTTATGCCAGGATTGACATTCTCAAACGAATTG 4852195 Query 22855 ATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 || ||| |||||||| || ||||| || || || || |||||| Sbjct 4852196 ATCTCCCGAGACGAAGGCCTGCACTGCGATTTCGCGTGCTTGCTGT 4852241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356229032639956