Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_006882.2
Length=45176
Score E
Sequences producing significant alignments: (Bits) Value
seq609 508 2e-139
seq424 461 2e-125
seq76 168 2e-37
seq850 167 7e-37
seq8 167 7e-37
seq55 149 2e-31
seq96 136 1e-27
seq15 100 8e-17
seq299 95.1 3e-15
>seq609
Length=9483
Score = 508 bits (562), Expect = 2e-139
Identities = 621/844 (74%), Gaps = 4/844 (0%)
Strand=Plus/Plus
Query 19440 GTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCC 19499
||||| || || || | ||||||||||||||||||||||| || | | || | ||
Sbjct 4321 GTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCT 4380
Query 19500 AATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAGTGGTTA 19559
|| || || |||||||||| |||| |||||||| | | | ||||| ||||||
Sbjct 4381 GCAGCTATTGGGTTGCACTTTTACMCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTA 4440
Query 19560 TACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCATAC 19619
||||| || ||||| ||| | || |||| | ||||||||| | || |||||| |||
Sbjct 4441 TACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTAC 4500
Query 19620 GCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCA 19679
||| || |||||||||| || | | | || ||| || ||||| || |||
Sbjct 4501 ATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCKTCCTTGGATTGCTGTTGCA 4560
Query 19680 TATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCG-TTTACCCATTTGGGCAAGG 19738
||| |||| || | |||| ||| |||||| ||||| | | |||||| |||| |||||
Sbjct 4561 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATTGGTCAAGG 4619
Query 19739 GAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATT 19798
|| ||| ||| ||||||||||| || |||||||||||||| ||||| ||| | |||||
Sbjct 4620 AAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATT 4679
Query 19799 CCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATT 19858
||| || || ||||| ||||||||||| || || |||||| | ||||| | ||| |||||
Sbjct 4680 CCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGTTGGTGTATT 4739
Query 19859 CGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGA 19918
||| || || || ||| ||||||||| || ||||| ||||| | |||| |||
Sbjct 4740 CGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGA 4799
Query 19919 AACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATA 19978
||| || || ||| ||| || | || || | ||||||||||| ||||| || ||
Sbjct 4800 AACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAGGAAGAAACTTA 4859
Query 19979 TAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAA 20038
|||||| || ||||| || || || ||||| ||||||| || ||||||||| ||||||
Sbjct 4860 TAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAA 4919
Query 20039 TAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTAC 20098
||||||||||||||||||||||| || ||| ||| || || || || || ||| | ||
Sbjct 4920 CAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCAC 4979
Query 20099 CTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGT 20158
| | | || || ||||||||||||||||| | |||||||| || || ||||| || ||
Sbjct 4980 CGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGT 5039
Query 20159 AGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACC 20217
|||| || ||||| || |||| || ||||||||| | | || | ||||| |
Sbjct 5040 AGTTSATAGTCAA-GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATC 5098
Query 20218 TCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCTTCGG 20277
| || | ||||||||||| || || |||||||| |||||||| || || |||||| | |
Sbjct 5099 TTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGCTGCTG 5158
Query 20278 CTGA 20281
|||
Sbjct 5159 TTGA 5162
>seq424
Length=105662
Score = 461 bits (510), Expect = 2e-125
Identities = 603/836 (72%), Gaps = 3/836 (0%)
Strand=Plus/Plus
Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349
|| ||| | ||| | || || || | ||||| ||||| | || |||||||| || |
Sbjct 94874 TTCTGTAACTGGATAACCAGCACTAAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTR 94933
Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409
||||| ||| |||| | | || ||| || ||||| | |||| || || || ||
Sbjct 94934 ATGATCCCTACCTTATTGACYGCAACTTCTGTATTTATTATTRCCTTCATTGCTGCTCCT 94993
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| ||||||| ||||| || |||| || ||||| || || || | ||||||||||||
Sbjct 94994 CCAATAGATATTGATGGTATTAGTGAACCTGTTTCTGGATCTCTAYTTTACGGAAACAAT 95053
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||||||||| || | | || | || || || || |||||||||| ||||
Sbjct 95054 ATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACYCGATA 95113
Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589
|||||||| | | | ||||| ||||||||||| || ||||| ||| | || ||||
Sbjct 95114 TGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 95173
Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649
| ||||||||| | || |||||| ||| |||||| |||||||||| || | |
Sbjct 95174 CTACACTTCTTACTTGGTGTAGCATGTTACATGGGTAGAGAGTGGGAACTTAGTTTCCGT 95233
Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709
| || ||| | || ||||| || |||||| |||| || | |||| ||| | ||
Sbjct 95234 CTGGGTATGYGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTRCT 95293
Query 19710 GTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768
|| ||||| | |||||| |||| |||| || ||| ||| ||||||||||| || ||
Sbjct 95294 GT-TTTCTTRATMTACCCAATTGGTMAAGGAAGCTTTTMTGACGGTATGCCTCTAGGAAT 95352
Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828
|||||||||||| ||||| ||| | |||||||| | || ||||| ||||||||||| ||
Sbjct 95353 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGACTGAGCACAACATCCTTATGCACCC 95412
Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888
|| |||||| | | ||| ||||| |||||||| | || || ||| ||||||||| ||
Sbjct 95413 ATTTCACATGTTAGSTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 95472
Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948
||||| ||||| | |||| |||||| || || ||| ||| || | ||
Sbjct 95473 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 95532
Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008
|| | ||||||||||| ||||| || |||||||| || ||||| || || || |||||
Sbjct 95533 TTACATATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 95592
Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068
|||| || || ||||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct 95593 CCGATTTATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTTGC 95652
Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTA-TGGCT 20123
| ||| || || || || || ||| | ||| | | || || |||||| |||||
Sbjct 95653 TGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATTGGCT 95708
Score = 437 bits (484), Expect = 3e-118
Identities = 559/774 (72%), Gaps = 2/774 (0%)
Strand=Plus/Minus
Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349
|| ||| | ||| | || || || || ||| ||||| | || |||||||| || |
Sbjct 27445 TTCTGTAACTGGATAACCAGCACTGAAAACYRTCTTTAYATTGGATGGTTTGGTGTTTTG 27386
Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409
||||| ||| |||| | | || ||| || ||||| | ||||| || || || ||
Sbjct 27385 ATGATCCCTACCTTATTGACYGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCT 27326
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| |||| ||| ||||| || |||| || |||| || || || | ||||||||||||
Sbjct 27325 CCAGTAGRTATTGATGGTATTMGTGAACCTGTTTMTGGATCTCTAYTTTACGGAAACAAT 27266
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||||||||| || | | || | || || || || |||||||||| |||||
Sbjct 27265 ATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACCCGATA 27206
Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589
|||||||| | | ||||| ||||||||||| || ||||| ||| | || ||||
Sbjct 27205 TGGGAAGCTGCTTYCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 27146
Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649
| ||| ||||| | || |||||| ||| ||| || |||||||||| || | |
Sbjct 27145 CTACACWTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGT 27086
Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709
| || ||| | || ||||| || |||||| |||| || | |||| ||| ||||
Sbjct 27085 CTGGGTATGTGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 27026
Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768
|| ||||| | | |||||| |||| |||| || ||| ||| ||||||||||| || ||
Sbjct 27025 GT-TTTCTTGATCTACCCAATTGGTAAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 26967
Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828
|||||||||||| ||||| ||| | || ||||| || || ||||| ||||||||||| ||
Sbjct 26966 CTCTGGTACTTTCAACTTCATGATTGTGTTCCAGGCTGAGCACAACATCCTTATGCACCC 26907
Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888
|| |||||| | ||||| ||||| |||||||| | || || ||| ||||||||| ||
Sbjct 26906 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 26847
Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948
||||| ||||| | ||||||||||| | || ||| ||| || | |
Sbjct 26846 TTCCTTGGTAACTTCTAGTTTGATCAAGGAAACCATAGAAAATGAATCTGCTAATGAAGT 26787
Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008
|| | ||||||||||| ||||| || |||||||| || ||||| | || || |||||
Sbjct 26786 TTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTATGGTTATTTTGG 26727
Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTT 20062
||||||| || ||||||||| |||||| |||||||||||||||||||||||
Sbjct 26726 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTT 26673
>seq76
Length=1023076
Score = 168 bits (186), Expect = 2e-37
Identities = 189/250 (76%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 20033 TTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATG 20092
|||||| ||||||||||||||||||||||| || ||| ||| || || || || || ||
Sbjct 1004308 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 1004367
Query 20093 GCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCA 20152
| | ||| | | || || ||||||||||||||||| | |||||||| || || |||||
Sbjct 1004368 GTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCA 1004427
Query 20153 GTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAG 20211
|| ||||||||| ||||| || |||| || ||||||||| | | || | |
Sbjct 1004428 ATCTGTAGTTGATAGTCAA-GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTG 1004486
Query 20212 CTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAG 20271
|||| || || | ||||||||||| || || |||||||| |||||||| || || ||||
Sbjct 1004487 CTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAG 1004546
Query 20272 CTTCGGCTGA 20281
|| | | |||
Sbjct 1004547 CTGCTGTTGA 1004556
>seq850
Length=2209
Score = 167 bits (184), Expect = 7e-37
Identities = 222/309 (72%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349
|| ||| | ||| | || || || || ||||| |||||| | || |||||||| || |
Sbjct 28 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTG 87
Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409
||||| ||| |||| | | || ||| || ||||| | ||||| || || || ||
Sbjct 88 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCT 147
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| |||||||| ||||| || ||||| || ||||| || || || | ||||||||||||
Sbjct 148 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAAT 207
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||| ||||| || | | || | || || || || |||||||||| |||||
Sbjct 208 ATTATWTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTTGCACTTTTACCCGATA 267
Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589
|||||||| | | | ||||| ||||||||||| || ||||| ||| | || ||||
Sbjct 268 TGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 327
Query 19590 TTCCACTTC 19598
| ||||||
Sbjct 328 CTACACTTC 336
>seq8
Length=4047118
Score = 167 bits (184), Expect = 7e-37
Identities = 223/310 (72%), Gaps = 0/310 (0%)
Strand=Plus/Plus
Query 19335 TGGTTTGGAGTACTTATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCC 19394
|||||||| || | ||||| ||| |||| | | || ||| || ||||| | | |
Sbjct 2331942 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGTC 2332001
Query 19395 TTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTA 19454
|| || || || || || |||||||| ||| | || ||||| || ||||| || || ||
Sbjct 2332002 TTCATTGCTGCTCCTCCAGTAGATATTGATAGTATTCGTGAACCTGTTTCTGGATCTCTA 2332061
Query 19455 ATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTG 19514
| ||||||||||||||||||||||| || | | || | || || || || ||
Sbjct 2332062 CTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTTG 2332121
Query 19515 CACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCA 19574
|||||||| ||||| |||||||| | | | ||||| ||||||||||| || |||||
Sbjct 2332122 CACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCT 2332181
Query 19575 TATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGG 19634
||| | || |||| | ||||||||| | || |||||| ||| ||| || |||||
Sbjct 2332182 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGG 2332241
Query 19635 GAACTATCTT 19644
||||||| ||
Sbjct 2332242 GAACTATTTT 2332251
>seq55
Length=1179671
Score = 149 bits (164), Expect = 2e-31
Identities = 222/312 (71%), Gaps = 11/312 (4%)
Strand=Plus/Plus
Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015
|||| ||| || ||||| || |||||||| || | || || || ||||| |||
Sbjct 344074 TTCGAGCACGAGGAAGAAACTTATAATATCGTA----CTCATGGTTATTTTGGCCAATTT 344129
Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075
|| || ||||||||| |||||| ||||||| ||||||||||||||| | ||| |||
Sbjct 344130 ATCTTCCAATATGCTAGTTTCAACAATTCTCTTTCTTTACATTTCTTCTTAGCTGCTTGG 344189
Query 20076 CCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAAT 20135
|| | || || || ||| | || | || | ||| |||| |||||||| | |||
Sbjct 344190 CCTGCAGTAGGTATCTGGTTCACGTTCACCG-----CGCATTATGACTTTCAACTTAAAT 344244
Query 20136 GGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGC 20194
||||| || || ||||| || ||||||||| ||||| || |||| || |||||
Sbjct 344245 GGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTTGTGTAATTAATACTTGGGC 344303
Query 20195 TGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAA 20254
|||| | | || | ||||| || || | |||||||||| || || | |||||| ||
Sbjct 344304 TGATATTATTAACCGTGCTAATCTTGGTATGAAAGTTATGCATGAACGTAGTGCTCACAA 344363
Query 20255 CTTCCCACTTGA 20266
|||||| || ||
Sbjct 344364 CTTCCCTCTAGA 344375
>seq96
Length=850568
Score = 136 bits (150), Expect = 1e-27
Identities = 181/249 (73%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 19513 TGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTC 19572
|||||||||| ||||| |||||||| | | | ||||| ||||||||||| || ||||
Sbjct 64834 TGCACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTC 64775
Query 19573 CATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGT 19632
| ||| | || |||| | ||||||||| | || |||||| ||| ||| || |||
Sbjct 64774 CTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGT 64715
Query 19633 GGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCAC 19692
||||||| || | | | || ||| | || ||||| || |||||| |||| ||
Sbjct 64714 GGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTG 64655
Query 19693 TATCAGCAGCTCTTGCTGTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGAT 19751
| |||| ||| |||||| ||||| | | |||||| |||| ||||| || ||| |||
Sbjct 64654 TTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGAC 64596
Query 19752 GGTATGCCT 19760
|||||||||
Sbjct 64595 GGTATGCCT 64587
>seq15
Length=2492501
Score = 100 bits (110), Expect = 8e-17
Identities = 148/210 (70%), Gaps = 10/210 (5%)
Strand=Plus/Minus
Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015
|||||| |||| ||||| || |||||||| ||||| | || || || ||| | ||||
Sbjct 1380072 TTCGGGTAAGAGGAAGAAACTTATAATATCATCGCTACTCATGGTTATTTTAGTCGATTC 1380013
Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075
|| || |||||||| ||||||| |||||| |||||||||||| || | ||||||
Sbjct 1380012 ATTTTCTAATATGCTAGTTTCAATCATTCTCATTCTTTACATTTATTCCAACCTACTTAG 1379953
Query 20076 CCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAAT 20135
|| | || || || || ||| || || | ||||||||||||| | |||
Sbjct 1379952 CCTGCAGTAGGTATTTGATTTA-----TTG-----CTTTATTATGGCTTTCAACTTAAAT 1379903
Query 20136 GGTTTTAACTTTAACCAGTCAGTAGTTGAT 20165
| ||| || || || || || ||| || ||
Sbjct 1379902 GATTTCAATTTCAATCAATCTGTAATTCAT 1379873
>seq299
Length=193022
Score = 95.1 bits (104), Expect = 3e-15
Identities = 194/287 (68%), Gaps = 10/287 (3%)
Strand=Plus/Minus
Query 19722 TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTT 19781
|||||| |||| ||||| || ||| | | ||||||||||| || | |||| | ||||
Sbjct 156182 TACCCAATTGGTCAAGGAAGCTTTTTTCACGGTATGCCTCTAGGAACCTCTCATGCTTTC 156123
Query 19782 AACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTC 19841
||||| ||| | |||||| | | || ||||| ||| ||||||| || || ||||| |
Sbjct 156122 AACTTCATGATTGTATTCTAGACTGAGCACAACATCATTATGCACCCATTTCACATATTA 156063
Query 19842 GGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACT 19901
| ||| || | |||||||| | || || |||||| || |||||| |||
Sbjct 156062 GATGTAGCCAGTGTATTCGGCG------ACATCAATGTTATGCATGGTTCTTTGGTAACT 156009
Query 19902 TCCTCGATCATCAAGG--AAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCG 19959
| | | |||| |||| | || ||| || | || | || || | ||||
Sbjct 156008 TTTAGTTTGTTAAAGGGAAAACCATAGAAAATGGAT--CTTAATGAAGGTTACAGTTTCG 155951
Query 19960 GGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 20006
|||||| ||||| || |||||||| || || || || || || |||
Sbjct 155950 AGCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 155904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144439795563312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |