Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq40 91.5 4e-13
seq5 91.5 4e-13
>seq40
Length=1372308
Score = 91.5 bits (100), Expect = 4e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 111702 CAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATT 111761
|||||||||||| | ||| | | || || |||||||||||||| |||||||| ||
Sbjct 1240797 CAGTTTTATGTAGCGAATGGGGAGTTGTCGTGTCAAATGTATCAGCGCTCTGCTGACATG 1240856
Query 111762 GGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821
|| ||||| ||||| |||||||||||| || || || || || ||| | || ||||||
Sbjct 1240857 GGCCTTGGCGTTCCATTTAATATTGCATCATATGCTCTTCTGACATGCATGATTGCTCAT 1240916
Query 111822 TTT 111824
||
Sbjct 1240917 GTT 1240919
>seq5
Length=5307744
Score = 91.5 bits (100), Expect = 4e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696
|| || || || | ||| || | ||| | |||||| ||||| ||| || || ||
Sbjct 4279543 ATAGAAGGGATATATGATACCTTAAAGGAGTGTGCTGTTATTAGCAAATCAGCTGGTGGT 4279484
Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGA 363756
|||||||| || |||||||| ||||||| | |||||||||||| || ||| ||
Sbjct 4279483 ATTGGTGTTTCCATCCACAACATTCGTGCCATGGGCAGTTACATTCGTGGAACAAATGGG 4279424
Query 363757 TACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGAC 363816
||| ||||| | || |||||||| || || || | ||||||| | || || ||
Sbjct 4279423 ACCTCTAATGGAATTGTGCCCATGCTGCGGGTTTTCAATGATACTGCTCGATATGTTGAT 4279364
Query 363817 CAGGGTGGAGGAAAGCGCAAAGG 363839
|| || ||||| ||| | |||||
Sbjct 4279363 CAAGGAGGAGGCAAGAGGAAAGG 4279341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303336032422664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |