Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq124 100 2e-16 >seq124 Length=632428 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| |||||||||||||||||||| || || || | || || | Sbjct 447466 AATGCAAATTTTCGTCAAAACGCTCACGGGAAAGACTATCACATTGGAGGTTGAAAGCTC 447407 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| |||| || ||| || ||| || || ||||| |||| || | Sbjct 447406 CGACACAATTG-ACAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATCCCTCCAGACC 447348 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||||| || |||| || ||||| || | ||||||| || | |||||||| | Sbjct 447347 AGCAAAGGCTAATTTTCGCAGGCAAGCAGCTTGAAGATGGACGGACTCTTGCCGATTACA 447288 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||||||| ||||| ||| | ||| | ||| Sbjct 447287 ACATTCAAAAGGAGTCAACTCTTCATCTAGTG 447256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425338546558240