Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq124 176 8e-39
seq15 159 6e-34
seq21 152 9e-32
seq14 149 1e-30
seq23 140 6e-28
seq6 131 3e-25
seq4 125 1e-23
seq143 100 5e-16
seq78 100 5e-16
seq44 100 5e-16
seq34 100 5e-16
seq1 100 5e-16
seq60 98.7 2e-15
seq256 95.1 2e-14
seq30 95.1 2e-14
seq13 95.1 2e-14
>seq124
Length=632428
Score = 176 bits (194), Expect = 8e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| |||||||| || | || | || || || ||||| ||||| ||||| |||||||
Sbjct 447237 TTCCACCGCGAAGACGGAGCACTAGATGAAGAGTTGACTCCTTTTGAATGTTGTAATCGG 447296
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|| |||| |||||||| | |||||| || ||||| || || ||||| ||||| || |
Sbjct 447297 CAAGAGTCCGTCCATCTTCAAGCTGCTTGCCTGCGAAAATTAGCCTTTGCTGGTCTGGAG 447356
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || |||||||||||||||||||| || ||||| || || ||||| | ||| |
Sbjct 447357 GGATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATTGTGTCGGAGCTTTCAA 447416
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
| ||||| ||||| || ||||||||||| || |||||||| || ||||||
Sbjct 447417 CCTCCAATGTGATAGTCTTTCCCGTGAGCGTTTTGACGAAAATTTGCATT 447466
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| | || | |||||||| ||||||||||||||||| ||||| |||||||
Sbjct 447695 CCACCGCGTAAACGGAGCACCAAGTGGAGCGTGGACTCTTTTTGTATGTTGTAATCGGCC 447754
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || ||||| || || || || ||||| ||||||
Sbjct 447755 AGGGTTCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATTAGCCTCTGCTGGTCCGGTGGA 447814
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||||||||| ||||| || ||||| || || || || || | ||| ||
Sbjct 447815 ATTCCTTCCTTGTCCTGAATTTTGGCCTTTACATTGTCAATAGTATCAGAACTTTCAACC 447874
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| || ||||| || ||||| || || || |||||||||||
Sbjct 447875 TCAAGGGTAATTGTTTTGCCGGTGAGAGTTTTCACAAATATCTGCAT 447921
Score = 154 bits (170), Expect = 3e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| |||| |||||| || | || ||||||||||| |||||||| ||||
Sbjct 354486 CCACCACGAAGACGCAGTACCAAATGCAAAGTCGACTCTTTTTGAATGTTATAGTCGGCC 354427
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||||| || | ||| | ||||| || ||||| || | || || ||||| |||||
Sbjct 354426 AAAGTCCTGCCGTGTTCCAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGTGGG 354367
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA-C 68413
||||| || || ||||| ||||| || || || |||||||| || | ||| | |
Sbjct 354366 ATGCCCTCTTTTTCTTG-ATCTTGGCYTTCACATTGTCGATGGTATCAGAGCTTTCCACC 354308
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||||||||||||| |||||||| || ||||| || |||||
Sbjct 354307 CTCCAAGGTGATGGTTTTTCCAGTGAGGGTTTTCACGAAGATTTGCAT 354260
Score = 145 bits (160), Expect = 1e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 68248 GCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCAT 68307
||| |||||| || || ||||||||||| || ||||| |||| | ||||| || |
Sbjct 447024 GCAGTACCAAATGCGAAGTCGACTCTTTTTGAATATTATAGTCGGCCAAAGTCCTGCCGT 447083
Query 68308 CTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGT 68367
|||| | ||||| || ||||| || || || || ||||| ||||| ||||| || || |
Sbjct 447084 CTTCCAGTTGCTTTCCAGCGAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTAT 447143
Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427
||||||| || ||||| ||| |||||||| || | || || |||| ||||| |
Sbjct 447144 CTTGAATTTTAGCCTTCACGTTGTCGATGGTATCCGAACTCTCAACCTCCAGAGTGATTG 447203
Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||||||| | |||||| || || |||||||||
Sbjct 447204 TTTTTCCCGTTAAGGTCTTCACAAAAATCTGCATT 447238
Score = 138 bits (152), Expect = 2e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || | ||||| || | || || || || || || || || || |
Sbjct 447465 TTCCCCCACGAAGACGAAGCACCAAATGCAATGTTGATTCCTTCTGAATATTGTAGTCAG 447524
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|| || | |||||||| | || || || ||||| || || || || ||||| ||||
Sbjct 447525 CCAGAGTGCGGCCATCTTCGAGTTGTTTACCCGCGAAAATCAGCCTCTGCTGGTCCGGTG 447584
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| || || || ||||| ||||| ||||| || |||||||| || | ||| |
Sbjct 447585 GAATACCCTCTTTATCTTGGATCTTGGCCTTCACATTGTCGATGGTATCAGAGCTTTCCA 447644
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||||||||||||||||| |||||||| || ||||| || |||||
Sbjct 447645 CCTCCAAGGTGATGGTTTTTCCAGTGAGGGTTTTCACGAAGATTTGCAT 447693
>seq15
Length=2492501
Score = 159 bits (176), Expect = 6e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| || |||||||| ||||| |
Sbjct 255612 CCACCTCGGAGACGAAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGCC 255671
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||||||||| || | |||||| || || || || | || || ||||| || |||
Sbjct 255672 AGAGTCCTCCCATCCTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGA 255731
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| ||||| ||| || || || |||| || ||
Sbjct 255732 ATTCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATCGTATCTGAGCTCTCCACC 255791
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||||||||||| || || || |||||||| ||||| |||||||||
Sbjct 255792 TCCAAGGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCATT 255839
>seq21
Length=2013095
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | || || | |||||||| | || ||||| || ||||||||||| ||||
Sbjct 1809682 CCTCCCCTGAGACGAAGCACCAAGTGCAAGGTAGACTCCTTCTGGATGTTATAGTCGGCC 1809623
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||| || || || | |||||| |||||||| || || || || ||||| |||||
Sbjct 1809622 AGAGTCCTACCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGTGGG 1809563
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || || |||||||| ||||| ||||| || || |||||||| | || ||
Sbjct 1809562 ATTCCCTCTTTGTCTTGGATCTTAGCCTTTACATTGTCTATGGTGTCCGAACTCTCAACC 1809503
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||| |||||||| || || | ||||||||||| ||||||||
Sbjct 1809502 TCCAGGGTAATGGTTTTCCCGGTCAACGTCTTGACGAAAATCTGCAT 1809456
Score = 96.9 bits (106), Expect = 6e-15
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| ||||| || | ||| || || ||||| || || ||||||||||| |
Sbjct 1809454 CCACCACGAAGACGCAAGACAAGGTGCAGGGTCGACTCCTTCTGAATGTTATAATCAGCA 1809395
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||||||||| || || |||||||||||||| || ||
Sbjct 1809394 AGGGTGCGACCGTCCTCCAGTTGCTTCCCGGCAAAGATTAGTCTTTGTTGGTCCGGGGGG 1809335
Query 68355 ATGCCTTCCTT 68365
||||| |||||
Sbjct 1809334 ATGCCCTCCTT 1809324
>seq14
Length=2855554
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | || | ||| || || |||||||| || ||||| ||||| |
Sbjct 999798 CCACCGCGCAGGCGGAGGACGAGGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCC 999739
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||| || | || ||||| || || || | ||| ||||| || || |||
Sbjct 999738 AAAGTTCGCCCATCCTCCAGTTGTTTCCCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 999679
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||||||||| ||| ||||| ||||| | ||| ||
Sbjct 999678 ATCCCCTCCTTGTCTTGAATCTTTGCCTTCACGTTGTCGATTGTGTCCGAGCTTTCGACC 999619
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || || || ||||| || || ||||||||
Sbjct 999618 TCCAACGTGATCGTCTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 999572
Score = 143 bits (158), Expect = 5e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || || || ||||| ||||| | || ||||| |||||||||
Sbjct 999324 ACCAAGTGCAGTGTCGATTCCTTCTGTATGTTGTAATCTGCCAGAGTCCTACCATCTTCT 999265
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || || || |||||||| ||||| ||||| |||||||||||
Sbjct 999264 AGTTGCTTACCAGCAAAGATCAGCCTCTGTTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 999205
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| || || || || ||||| || | || |||||||| ||||| || ||
Sbjct 999204 ATCTTGGCTTTCACATTGTCAATGGTATCAGAGCTCTCCACTTCCAAAGTGATCGTCTTG 999145
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||| || || ||||||||
Sbjct 999144 CCTGTCAAGGTCTTCACAAAAATCTGCAT 999116
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| | || | ||||| || || || || || ||||||||||| ||||| |
Sbjct 999570 CCACCGCGCAATCGAAGCACCAAATGCAGAGTTGATTCCTTTTGGATGTTGTAATCTGCT 999511
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || || |||||||| | ||||| || ||||| || | || |||||||| |||||
Sbjct 999510 AAAGTTCTGCCATCTTCGAGTTGCTTGCCTGCGAAGATCAACCTCTGTTGGTCTGGTGGG 999451
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||||||||| || || ||||| || | || |||
Sbjct 999450 ATGCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATGGTATCGGAGCTCTCCACT 999391
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || || | ||| || || || ||||||||
Sbjct 999390 TCCAAAGTGATTGTCTTGCCAGTCAAGGTTTTCACAAAAATCTGCAT 999344
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || || || || |||||||||||||| | || ||||| || |||||
Sbjct 999096 ACCAGGTGCAGTGTCGATTCCTTCTGGATGTTATAATCTGCCAGAGTCCTACCGTCTTCG 999037
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | || |||||||| ||||||||||| ||||| |||||
Sbjct 999036 AGTTGCTTACCAGCAAAGATCAACCTCTGTTGGTCAGGTGGAATGCCCTCCTTATCTTGG 998977
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| || || || ||||| || || | || || ||||||||||| |||||
Sbjct 998976 ATCTTGGCTTTCACATTATCGATTGTATCAGAGCTCTCGACCTCCAAGGTGATTGTTTTG 998917
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||| || || || ||||||||
Sbjct 998916 CCAGTCAAGGTTTTAACAAAAATCTGCAT 998888
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| | | |||| || || || || || || ||||| || |||||||
Sbjct 998658 CCACCGCGAAGTCTAAGCACCAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCGGCA 998599
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || ||||| || || ||||| |||||||| |||
Sbjct 998598 AGGGTTCGACCATCCTCGAGTTGCTTACCAGCGAAGATAAGCCTTTGCTGGTCGGGAGGA 998539
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || || || ||||| ||||||||||| || || ||||| || | ||| ||
Sbjct 998538 ATTCCCTCTTTATCTTGGATCTTTGCCTTTACATTGTCAATGGTATCCGAACTTTCCACC 998479
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| ||||| || ||||| || || ||||| || |||||
Sbjct 998478 TCGAGGGTGATTGTTTTGCCAGTGAGAGTTTTCACGAAGATTTGCAT 998432
Score = 104 bits (114), Expect = 4e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | ||||| || | || || ||||| ||||| || || || |
Sbjct 998886 CCCCCACGAAGCCGAAGCACCAAATGCAAAGTAGATTCTTTCTGGATATTGTAGTCAGCA 998827
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || || || || ||||| || || ||
Sbjct 998826 AGAGTACGGCCGTCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGTTGATCAGGAGGG 998767
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||| || || ||||| || || || || || | ||| ||
Sbjct 998766 ATACCCTCCTTATCTTGGATTTTAGCCTTCACATTGTCAATCGTATCAGAACTTTCCACC 998707
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||||| || || |||||||| || ||||| |||||
Sbjct 998706 TCAAGCGTGATGGTTTTGCCAGTAAGGGTCTTCACAAATATTTGCAT 998660
>seq23
Length=1845300
Score = 140 bits (154), Expect = 6e-28
Identities = 380/580 (66%), Gaps = 24/580 (4%)
Strand=Plus/Minus
Query 173101 AATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTC 173160
|||||||||||||||||| |||||||| ||||| ||||| ||||||||||| |||||
Sbjct 1513515 AATTGACACGATTATGCATTTTGCTGCCCAGACTCATGTTGACAACTCGTTTGGTAATAG 1513456
Query 173161 GCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCG-AGGC 173219
| | || || | ||| || |||| || || || ||||| ||||| || | | |
Sbjct 1513455 TTTCGAGTTCACTAAGAATAATATCTATGGCACACATGTTCTTTTGGAA-GCTTGTAAGG 1513397
Query 173220 TCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGA----- 173274
|| |||| | || |||||||| |||| ||| || |||||||| || ||
Sbjct 1513396 TCACTGGCCAGATTAAGAGGTTCATCCATGTTAGTACGGATGAAGTATATGGTGAAACAG 1513337
Query 173275 --GAGCAGTCTG----GGCAAAAAAGAAGGCCTCGATGAACACTCGTCCCTCGAGCCAAC 173328
||| | ||| || ||| | |||| || |||| || |||||
Sbjct 1513336 ATGAGGATGCTGTTGTGGGAAACCATGAGGCTTC----CCAACTCCTC-------CCAAC 1513288
Query 173329 AAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATC 173388
||| ||||| | ||| | || ||||| || |||||| | | | || ||| || ||
Sbjct 1513287 AAATCCATACTCTGCAACAAAAGCTGGAGCTGAAATGCTCGTAATGGCCTATGGCAGGTC 1513228
Query 173389 GTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCC 173448
|| |||| || ||| ||| || || |||||||| || || || ||||||| ||
Sbjct 1513227 ATATGGATTACCTGTGATCACGACTCGAGGAAACAATGTCTACGGACCCAATCAGTTTCC 1513168
Query 173449 CGAAAAAATGATCCCAAAATTTATTCTTCGCGCAACCCGTGGCCTGGACCTCCCCATCCA 173508
||||| | || ||||| || |||||| || | | |||| | || || || ||
Sbjct 1513167 TGAAAAGCTAATTCCAAAGTTCATTCTTTTGGCCATGAGAGGCCAGTCTCTTCCGATTCA 1513108
Query 173509 CGGGGACGGCGGGGCTTTGCGGTCGTATTTGTATGTTGATGACGTGGCAGAGGCTTACAT 173568
||||| || | | || ||| |||| ||| || || || |||||||
Sbjct 1513107 TGGGGATGGTTCTAATGTTAGGAGTTATCTGTACTGTGAGGATGTTGCTGAGGCTTTTGA 1513048
Query 173569 TACTATTTTGCTCAAGGGCAATGTCGGGGAAACGTACAACATTGGCACACAGAAGGAGCG 173628
|||| | | ||| || | || || | || |||||||| ||| |||||||| |
Sbjct 1513047 AGTTATTCTTCACAAAGGAGAGGTTGGTCATGTTTATAACATTGGGACAAAGAAGGAGAG 1512988
Query 173629 CAGTGTTGTAGATGTTGCGCATGATATTTGCAAGATTTTC 173668
|| ||| |||||||||| | ||||| ||||| |||||
Sbjct 1512987 AAGGGTTATAGATGTTGCCAAAGATATATGCAAACTTTTC 1512948
>seq6
Length=5093711
Score = 131 bits (144), Expect = 3e-25
Identities = 360/550 (65%), Gaps = 14/550 (3%)
Strand=Plus/Minus
Query 9944 CGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAAT 10003
||||||||| ||||| |||| |||||||||||||| || |||| || || ||
Sbjct 4852528 CGCCTTCTGATACTCTCCCACCCTCTTCTCGAAGAAGTTGGTTTTCCCCTGCAGCGATAT 4852469
Query 10004 GAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGT 10063
| ||||| | || || ||||||| | | |||| || || || |||
Sbjct 4852468 CAATTCCATCCAATCGAACGGGTTCTGTACATTGTAAATCTTGCTGTGCCCTAGGGCTAC 4852409
Query 10064 GAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAAT 10123
| | |||||||| |||||||||||||||| ||||||||| || |||||| || |
Sbjct 4852408 CAGCAACCGGTCAGCAACGAACTCGATGTACTCGCTCATCAGATCGCCGTTCATCCCCAC 4852349
Query 10124 CATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGAC 10183
|| ||| || | || ||||| | ||| ||| | ||| | | ||||| | | |||
Sbjct 4852348 CAACGCGCACGGCAGTGCATCGCACACGAATTCCCTCTCGATATCCACCGCCTGCCGGAC 4852289
Query 10184 GATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGA-GCTCTC 10242
||| | ||| || ||| | ||| | ||| | | || ||||| | || | |
Sbjct 4852288 GATCCCCTTCACTTTGTCGTCGCTCAGTTGATTCCTCATCAGAGAGTACAGCAAGCACGC 4852229
Query 10243 CAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGG 10302
||| || | || ||||| ||||| ||| ||| || ||||| || || || || |
Sbjct 4852228 GAAATCGCAG-TGCAGGCCTTCGTCTCGGGAGATCAATTCGTTTGAGAATGTCAATCCTG 4852170
Query 10303 GCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGAC 10362
|||| || || || || ||||||||| ||||||||||| || ||||| | || ||
Sbjct 4852169 GCATAAGGCCTCGTTTCTTCAGCCAGAATATGGCGCAGAAACTTCCCGAGAAGAAAATAC 4852110
Query 10363 CCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA------GGAGCGGTCGCGCGAAA 10416
| ||||| || | || | | || |||||||| || ||||| |||| |
Sbjct 4852109 CTTCCACACATGCGAAGCCAATCAGACGCTCTGCAAACGACTCGGAGCCGTCG------A 4852056
Query 10417 AGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGA 10476
|||| |||||| | || ||||| | ||| ||| | |||||||| || | ||
Sbjct 4852055 TCCATTTTAGCGCCCACTCGGCTTTCTTCGCGACGCAAGGTACAGTCTCGATGGCGTGGA 4851996
Query 10477 AGAGCTTGTT 10486
| | | ||||
Sbjct 4851995 ACAACCTGTT 4851986
Score = 104 bits (114), Expect = 4e-17
Identities = 62/65 (95%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1973594 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1973653
Query 84516 CCCAC 84520
|||||
Sbjct 1973654 CCCAC 1973658
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 4419208 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4419149
Query 84516 CCCAC 84520
|||||
Sbjct 4419148 CCCAC 4419144
>seq4
Length=5448771
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || | | || | |||||| ||||||||||| |||||||| || ||||
Sbjct 205222 CCTCCACGGAGCCTTAGCACAAGGTGTAGGGTGGACTCTTTCTGGATGTTGTAGTCGGCA 205281
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || ||||| | || ||||| || ||
Sbjct 205282 AGAGTTCGACCATCCTCCAGCTGCTTACCAGCAAAAATGAGACGCTGCTGGTCCGGCGGT 205341
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| ||||| || |||||||| || | || ||
Sbjct 205342 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCAGAACTCTCGACC 205401
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| || || || || || || ||||| ||||||||
Sbjct 205402 TCGAGAGTTATGGTCTTCCCTGTCAGCGTTTTCACGAAGATCTGCAT 205448
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || | ||| ||||||||||| || |||||||| ||||||| || || | || ||
Sbjct 199562 AACACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCC 199621
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| | |||||| || || || ||||| | || ||||| || || || || ||||||||
Sbjct 199622 TCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGCGGTATTCCCTCCTTGTCC 199681
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||||||||| || |||||||| || | || || || | || |||||
Sbjct 199682 TGAATCTTTGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCGAGAGTTATGGTC 199741
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||| | || || || || ||||||||
Sbjct 199742 TTCCCCGTCAACGTTTTCACAAAGATCTGCAT 199773
Score = 96.9 bits (106), Expect = 6e-15
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 593243 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGARC 593184
Query 84516 CCCAC 84520
|||||
Sbjct 593183 CCCAC 593179
Score = 91.5 bits (100), Expect = 3e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 173096 GAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGT 173155
||| |||| ||||||||||||||||||||||| || || || || ||||||||||| ||
Sbjct 2668182 GAAGAAATCGACACGATTATGCACTTTGCTGCACAAACACACGTAGACAACTCGTTTGGG 2668241
Query 173156 AACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGA 173208
|||||| | | || || | |||||| | || || || || ||||| || ||
Sbjct 2668242 AACTCGTTCGAGTTCACGAACAACAACATTTATGGTACTCATGTTCTTCTTGA 2668294
>seq143
Length=575902
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 487902 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 487843
Query 84516 CCCAC 84520
|||||
Sbjct 487842 CCCAC 487838
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||| |||||||||||||||||||||| |
Sbjct 485651 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTAAACCTTGTGGTCGTGGGTTCGAAC 485592
Query 84516 CCCAC 84520
|||||
Sbjct 485591 CCCAC 485587
>seq78
Length=1002665
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 910960 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 911019
Query 84516 CCCAC 84520
|||||
Sbjct 911020 CCCAC 911024
>seq44
Length=1278902
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 201558 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 201617
Query 84516 CCCAC 84520
|||||
Sbjct 201618 CCCAC 201622
>seq34
Length=1513885
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1396131 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1396072
Query 84516 CCCAC 84520
|||||
Sbjct 1396071 CCCAC 1396067
Score = 96.9 bits (106), Expect = 6e-15
Identities = 56/58 (97%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401444 TAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 1401387
Score = 95.1 bits (104), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1383655 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 1383596
Query 84516 CCCAC 84520
|||||
Sbjct 1383595 CCCAC 1383591
Score = 93.3 bits (102), Expect = 8e-14
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 1390939 GCCCGTCTAGCTCAGTTGGTAGAGCGTAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1390880
Query 84516 CCCA 84519
||||
Sbjct 1390879 CCCA 1390876
Score = 93.3 bits (102), Expect = 8e-14
Identities = 61/66 (92%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAA-GGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514
||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||
Sbjct 1406780 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1406721
Query 84515 CCCCAC 84520
||||||
Sbjct 1406720 CCCCAC 1406715
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||| ||| |||||||||||||||||||||||| ||||
Sbjct 1388193 GCCCGTCTAGCTCAGTTGGTAGAGCGAAAGACTCTTAACCTTGTGGTCGTGGGTTTGAGC 1388134
Query 84516 CCCACATCGGGC 84527
|||||| ||||
Sbjct 1388133 CCCACAGTGGGC 1388122
>seq1
Length=7185522
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 6394607 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6394548
Query 84516 CCCAC 84520
|||||
Sbjct 6394547 CCCAC 6394543
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 6701953 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6701894
Query 84516 CCCAC 84520
|||||
Sbjct 6701893 CCCAC 6701889
>seq60
Length=1131370
Score = 98.7 bits (108), Expect = 2e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | || | ||| |||| ||| || || ||||| ||||||||||||||||| |
Sbjct 437119 CCTCCCCTGAGCCTCAAGACCAGGTGAAGGGTTGACTCCTTTTGGATGTTATAATCTGCA 437178
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | ||||| || || ||||| || || || || | ||||| ||||| |||||
Sbjct 437179 AGTGTTCGACCATCATCCAATTGCTTACCAGCAAAAATTAACCTTTGCTGGTCAGGTGGG 437238
Query 68355 ATGCCTTCCTTGTC 68368
|| ||||| |||||
Sbjct 437239 ATACCTTCTTTGTC 437252
>seq256
Length=251342
Score = 95.1 bits (104), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 115886 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 115827
Query 84516 CCCAC 84520
|||||
Sbjct 115826 CCCAC 115822
>seq30
Length=1592719
Score = 95.1 bits (104), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 885407 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 885466
Query 84516 CCCAC 84520
|||||
Sbjct 885467 CCCAC 885471
>seq13
Length=3104439
Score = 95.1 bits (104), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 849430 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 849489
Query 84516 CCCAC 84520
|||||
Sbjct 849490 CCCAC 849494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921610280665440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |