Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq29 237 1e-56
seq6 203 2e-46
seq2 196 4e-44
seq56 109 4e-18
seq7 105 5e-17
seq117 102 6e-16
seq39 95.1 9e-14
seq36 91.5 1e-12
>seq29
Length=1578684
Score = 237 bits (262), Expect = 1e-56
Identities = 720/1086 (66%), Gaps = 40/1086 (4%)
Strand=Plus/Plus
Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303
|||| || || |||||| || || | |||||||||||||| | ||||| |||
Sbjct 288535 GTTGTCTTGTCTTCGGCAGAGACGTTCAAGATACCATTGGCATCAATGTCAAAGCACACT 288594
Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363
||||| || || ||||| |||| || ||||| || | | |||| | || ||
Sbjct 288595 GTGATTTGGGGAACACCTCTGGGAGCTGGAGGGATGCCAGAGAGCTCAAATTTCCCAAGC 288654
Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTC----ACCCTCGAAAATTTGGATAGTAACTAC 517419
||| || || | | || |||||| ||| ||| | | ||| || || |
Sbjct 288655 AAATTGTTGTC----GCGGGTTCTCGTTCTCTCACCTTCGTATACTTGAATCAACACACC 288710
Query 517420 AGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGT 517478
|| || || || || || || | ||||| ||| || || || || || ||||
Sbjct 288711 AGGCTGGTTGTCGGAGTAGGTAGAGAATAC-CTGTTCCTTCTTGGTGGGGATGGTCGTGT 288769
Query 517479 TTCTATCAAT-AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGA 517537
|||| ||| || | || |||| | |||||| |||||||| |||||||| || |||||
Sbjct 288770 TTCTCGGAATCAACACTG-TCATGACACCACCAGCTGTTTCCAAACCAAGGGAGAGAGGG 288828
Query 517538 GTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGC 517596
|||||||| | || | || | || | || |||| | |||| ||||| | ||
Sbjct 288829 GTGACATCCAACAGAAGAAGGTCCTGCACCTTCTCATTGCCCTCACCACTCAAGA-TGGC 288887
Query 517597 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGT 517654
|| |||| ||||||||||| ||||| ||||||||||| || | | || || ||
Sbjct 288888 AGCCTGAACTGCAGCACCATAAGCAACGGCTTCATCAGGGTTGATGCTCTTGCAA--AGC 288945
Query 517655 TTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCC 517713
| || |||||||| |||| ||| || || | || ||||| ||||| | || || ||
Sbjct 288946 TCCTTGCCATTGAAGAAATCTTGCAACAACT-GTTGGACCTTGGGAATCCTAGTAGAGCC 289004
Query 517714 TCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTT 517772
|| || | |||| ||||| || ||| | || |||| || | |||| ||| |
Sbjct 289005 ACCGACAAGGACAACATCATGGACG-GTGCTCTTGTCCATCTTGGCATCCCTCAAACACT 289063
Query 517773 TTTCAACGGGTTCAAGACCCGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGC 517830
| |||||||| || | || | || || | || || ||| ||| || ||| | ||
Sbjct 289064 TCTCAACGGGCTCCATACACTTCCTGAAGAGATCCATGTTCAA--TTCCTCAAATCTGGC 289121
Query 517831 TCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAG 517889
| ||||| || | || || |||||||||||| |||| ||||||| |||||| || |
Sbjct 289122 ACGAGTAATGGTTG-AGTAGAAGTCAATTCCTTCGTACAAGGAATCAATTTCAATGGTGG 289180
Query 517890 TTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA 517949
| |||| | || || || | | ||||| | ||||| | |||||| || || | ||
Sbjct 289181 TCTGAGCAGTGGATGAGAGAGTCCTCTTAGCCCTCTCACAAGATGTCCTCAGCCTCC-TA 289239
Query 517950 AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATAT--TTTCTCTTGAAATCTTCAACAC 518006
|| ||| ||| | ||| | ||| | || | | || |||||||| || | |||
Sbjct 289240 AGAGCTCTTG--GGTTGCCACTAATGTCCTTCTTGTGCTTCCTCTTGAACTCCTGCACAA 289297
Query 518007 ACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAG 518066
| | || | | || || ||||| ||||| || | | |||| ||| | || |
Sbjct 289298 AGTGGTTCACCAATCTGTTGTCGAAATCCTCACCACCAAGATGCGTATCTCCAGCAGTGG 289357
Query 518067 CTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCAC 518126
| | || | ||| | || ||||||| | | ||||| |||||| || |||||||
Sbjct 289358 CCTTCACCTCGAAGATACCCTCTTCAATGGTAAGAAGAGAGACATCAAAAGTACCACCAC 289417
Query 518127 CCATATCAAAAATAAGTACATTCATTTCTTTGTCT-TGGTTT-----TTATCAAGACCAT 518180
| | ||||||||| | || ||| | || | ||||| || ||||||||||
Sbjct 289418 CAAGATCAAAAATCAAAACGTTCTTCTCACCAACGCTGGTTGCCTTCTTGTCAAGACCAT 289477
Query 518181 ACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTC 518240
| |||| ||||| || || || ||||| || ||||||| ||||| |||||||||||
Sbjct 289478 ATGCAATGGCAGCGGCCGTGGGCTCATTGATGATTCTCATGACATTGAGACCAGCAATGA 289537
Query 518241 TTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAA 518300
|| ||||| || ||||| || | ||| || || || || || ||||| || |||| |
Sbjct 289538 CACCAGCATCCTTGGTGGCCTGACGTTGAGAGTCATTGAAGTACGCAGGGACGGTAACCA 289597
Query 518301 CGGCAT 518306
| ||||
Sbjct 289598 CAGCAT 289603
>seq6
Length=5093711
Score = 203 bits (224), Expect = 2e-46
Identities = 681/1050 (65%), Gaps = 20/1050 (2%)
Strand=Plus/Minus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| |||||||| |||||||||||||| | || || || | || || || ||
Sbjct 1920644 GCAGAAACATTAAGGATACCATTGGCATCAATGTCGAAGCAAACGTTGATCTGGGGAACA 1920585
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|||||| |||| || || || || | | || | |||| ||| ||||||
Sbjct 1920584 CCTCTCGGAGCTGGAGGAATGCCAGAAAGCTCGAACTTGCCCAACAAATTGTTATCTCGG 1920525
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
|| | | ||||||||| | | || || ||| | | ||| |||||||| ||
Sbjct 1920524 GTTCTCGTCCTTTCACCCTCATAGACCTGAATGAGAACACCGGGTTGGTTATCTGAGTAT 1920465
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATATT 517494
|| | || ||| || || || || || || || || ||||| | |
Sbjct 1920464 GTGGAGAAGACTTGCTCCTTCTTGGTGGGTATGGTGGTATTCCTGGGGATCAAAACT--- 1920408
Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554
||||| | ||| || || || || |||||||| || |||||||||||||| | || |
Sbjct 1920407 -GTCATCACACCTCCAGCAGTCTCCAAACCAAGGGACAGAGGAGTGACATCCAGAAGCAG 1920349
Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCAC 517613
|| || |||| ||| |||| || |||| |||| | | || ||||||| ||||| |
Sbjct 1920348 AAGATCCTGAACTTTCTCATTTCCTTCACCACACAATA-TGGCAGCTTGAACTGCAGCCC 1920290
Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673
| || ||||| || ||||||||||| | | | | |||| || |||||||| ||||
Sbjct 1920289 CGTAAGCAACTGCCTCATCAGGATTGATACTCTTGCACAGTTCCTTGCCATTGAAGAAAT 1920230
Query 517674 -TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732
|| || || || ||||||||||| | | || || ||||| | |||| |||
Sbjct 1920229 CCTGCAA-TAGCTGCTGCACCTTAGGAATCCTCGTAGAGCCACCAACAAGGACAACATCA 1920171
Query 517733 TGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791
|| || ||| ||| |||| |||| ||| ||| || ||||| || || | ||
Sbjct 1920170 TGGACACTG-CTTTTGTCCATCTTTGCATCTCTCAAACACTTCTCAACTGGCTCCATACA 1920112
Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851
| || |||| ||| || || || || |||| | ||| | || | |
Sbjct 1920111 CTTCCTGAACAGGTCCATGTTGAGCTCCTCAAACCTAGCACGAGTGATGGTTGTGTAGAA 1920052
Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911
||| ||||| ||| |||||||||||| || || |||||||||| | || || || |
Sbjct 1920051 ATCGATTCCCTCGTACAAAGAATCAATCTCGATTGTAGTTTGAGCGGTGGATGAAAGGGT 1919992
Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA 517971
| || || | ||||| || ||||| | ||| | | || | | | | | |
Sbjct 1919991 CCTCTTGGCCCTCTCACAAGCAGTCCTCAATCTCCTGAGAGCCCTCGGGTTTCCACTGAT 1919932
Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031
|| | |||| || |||||||| |||| ||| | | || | | || || ||
Sbjct 1919931 GTCCTTCTTATTCTTCCTCTTGAATTCTTGAACGAAGTGGTTAACCAATCTGTTGTCGAA 1919872
Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091
|| |||||||| | | ||| | || | ||| || | || | |||| || || ||
Sbjct 1919871 GTCCTCACCTCCAAGATGAGTGTCACCGGCCGTTGCCTTCACCTCAAAAATACCTTCCTC 1919812
Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151
|| | | || | |||||| ||||| ||||||| |||||| || ||||||||| |
Sbjct 1919811 AATTGTGAGGAGGGAGACATCAAATGTTCCTCCACCCAGATCAAATATCAGTACATTCTT 1919752
Query 518152 TTCTTTGTC-TTGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205
|| | ||| ||||| || || ||||| |||| || ||||| || || ||
Sbjct 1919751 CTCGCCAACGCTGGTCGCCTTTTTGTCGAGTCCATATGCAATGGCTGCAGCTGTAGGCTC 1919692
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
||||| || |||| |||||||| || ||||| ||| |||||||| ||||| || |
Sbjct 1919691 GTTAATGATCCTCATGACATTAAGGCCGGCAATGACTCCGGCATCTTTTGTGGCCTGACG 1919632
Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGT 518295
|| || || || || || |||||||| ||
Sbjct 1919631 CTGGGAGTCATTGAAGTAGGCAGGAACGGT 1919602
Score = 183 bits (202), Expect = 2e-40
Identities = 688/1068 (64%), Gaps = 16/1068 (1%)
Strand=Plus/Minus
Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309
||||| | |||| ||||| || |||||||||||||| | ||| || ||| ||||
Sbjct 1864147 TTATCCTCCGCAGAAACATTCAGGATACCATTGGCATCAATATCGAAGCAGACGGTAATT 1864088
Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369
||||| || ||||| | || || ||||| || | | |||| |||| || ||
Sbjct 1864087 TGAGGAACACCTCTAGGGGCCGGAGGGATTCCAGAGAGCTCAAATTTTCCTAGCAAGTTG 1864028
Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429
|| || || | | || || || | | |||||| |||| | | ||| ||
Sbjct 1864027 TTGTCACGGGTTCTTGCCCTCTCTCCTTCATAGACTTGGATCAAAACTCCGGGTTGGTTG 1863968
Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489
|| || || || | || ||| || || || || || ||||| || |||
Sbjct 1863967 TCGGAGTAGGTAGAGAAAACTTGTTCCTTCTTGGTGGGGATGGTGGTGTTCCTTGGAATT 1863908
Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549
| ||||| | |||||| || ||||| | ||||| || ||||| |||||||| |
Sbjct 1863907 AGGACAGTCATCACACCACCAGCCGTTTCCAGTCCAAGGGACAGAGGGGTGACATCCAGA 1863848
Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609
|| | | || |||| || || | | || ||||| || || || | |||
Sbjct 1863847 AGCAACAGATCCTGAACCTTCTCGTTGCCCTCGCCGCTCAGAATGGCGGCCTGGACTGCA 1863788
Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669
|| || || || |||||||||||||| || | | | | || | ||| ||||||||
Sbjct 1863787 GCTCCGTAGGCCACAGCTTCATCAGGGTTGATACTCTTGCAAAGCTCTTTGCCATTGAAG 1863728
Query 517670 AAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728
|||| || || || | | ||||| ||||| | || || || ||||| | || |
Sbjct 1863727 AAATCCTGCAACAACTGCTGC-ACCTTGGGAATCCTAGTAGAGCCACCAACAAGAACCAC 1863669
Query 517729 TTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787
||||| | || | || |||| || | ||| || || ||||||||||| |
Sbjct 1863668 GTCATGAATAC-TGCTCTTGTCCATCTTAGCATCTCTCAAGCACTTCTCAACGGGTTCCA 1863610
Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847
|| | || || | ||| ||||| || ||| |||| | |||| || ||
Sbjct 1863609 TACACTTCCTGAAAAGGTCCATGTTGAGTTCCTCAAATCTAGCACGGGTAATGGTTGAAT 1863550
Query 517848 TATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATA 517907
| || ||||| ||| ||| |||||||| || || |||||||||| | ||||| |
Sbjct 1863549 AGAAGTCGATTCCCTCGTACAGAGAATCAATCTCTATTGTAGTTTGAGCTGTGGAAGAGA 1863490
Query 517908 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGA 517966
| | | || || | ||||| | || || | ||| | |||| || | | ||||
Sbjct 1863489 GAGTCCTCTTCGCCCTCTCACAAGAAGTTCTCAATCTCC-TAAGAGCCCTGG--GATTCC 1863433
Query 517967 TTCAAATCTGTTTTATATT--TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024
| ||| | ||| | || ||||||| || || | || | | || | | |
Sbjct 1863432 CACTAATGTCTTTCTTGTTCTTTCTCTTAAATTCCTGCACGAAGTGATTAACCAATCTGT 1863373
Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084
|||||||||| ||||| || | | || | |||| ||| || | || | |||| |
Sbjct 1863372 TATCAAAATCCTCACCACCAAGATGGGTGTCACCTGCCGTTGCCTTCACCTCAAAAATAC 1863313
Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144
| || || | | | || | |||||| || |||||||||| ||||||||| || |
Sbjct 1863312 CTTCCTCGATCGTGAGCAGTGAAACATCAAAAGTACCACCACCCAAATCAAAAATTAGAA 1863253
Query 518145 CATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAG 518198
||||| | || | |||| | || ||||||||||| |||| || |||||||
Sbjct 1863252 CATTCTTCTCACCGGAGCTGGTAGCCTTCTTGTCAAGACCATAAGCAATGGCGGCAGCAG 1863193
Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258
|||||||||| || || | || || || || || | || || |||||||| ||||
Sbjct 1863192 TTGGTTCATTGATGATACGCATCACGTTTAGGCCTGAGATGACACCAGCATCTTTGGTGG 1863133
Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306
| ||||| |||||||||||||| || || || ||||| | ||||||||
Sbjct 1863132 CCTGTCTCTGTGAATCGTTAAAGTAGGCTGGGACAGTGACAACGGCAT 1863085
Score = 87.8 bits (96), Expect = 1e-11
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 518530 AGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGT 518589
||| ||| | ||||| || || | || | || || ||||| || || ||| | || |
Sbjct 1918892 AGTGTTGATGGGATTCATAGCGACCTGGTTCTTAGCAGCATCGCCGATGAGACGCTCGCT 1918833
Query 518590 CTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649
|| || || |||||| || || || || ||||| || ||||||||||||||||| ||
Sbjct 1918832 ATCGGTGAAACCAACATAAGACGGCGTCGTTCGATTCCCCTGATCATTCGCAATAATCTC 1918773
Query 518650 AACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709
||| | | | |||||||| || ||||| |||| || || | ||| ||||||||
Sbjct 1918772 AACACGATCGTGCTGCCATACTCCAACACACGAGTAAGTCGTACCGAGATCGATACCAAT 1918713
Query 518710 AGC 518712
||
Sbjct 1918712 GGC 1918710
>seq2
Length=6783546
Score = 196 bits (216), Expect = 4e-44
Identities = 691/1069 (65%), Gaps = 22/1069 (2%)
Strand=Plus/Minus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|| || ||||| ||||| || || || || | || || ||| | |||||||| |||
Sbjct 2804080 GCCGTGACATTCAGAATTCCGTTCGCGTCGATGTCGAAGCAGACGTTGATTTGAGGCACC 2804021
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|||||| | || || || || || | | | ||||||||| ||| || || |||||
Sbjct 2804020 CCTCTCGGCGCCGGAGGTATTCCCTTGAGCTCAAATGTTCCGAGAAGGTTGTTGTCTTTT 2803961
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
|| | || ||| || ||| ||| |||||| ||| || ||||| || ||||||
Sbjct 2803960 GTTCTTGCTCTTTCCCCTTCGTAAACTTGGATCAAAACGCTGGTCTGATTGTCGGAATAA 2803901
Query 517439 GTTGTAAATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGT 517497
|| | || || ||| || | | |||| || |||||||| ||| | |||
Sbjct 2803900 GTCGAGAAAAC-CTGCTCCTTCTTCTTCGGAACCGTCGTGTTTCTTGGAATTAACACGGT 2803842
Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557
||| | || || || ||||| | || || ||||| ||||| || | || | |
Sbjct 2803841 CATCACTCCGCCGGCGGTTTCGATTCCGAGGCTCAGAGGCGTGACGTCGAGGAGAAGCAG 2803782
Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617
|| ||| | || || | || || ||||| || || || | || ||||| ||
Sbjct 2803781 ATCTTGGACCTTCTCGTTGCCTTCGCCGCACAGAATCGCCGCCTGTACGGCGGCACCGTA 2803722
Query 517618 TGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAATT- 517674
|| || ||||| ||||| || | | || || || | ||| || ||||| ||||
Sbjct 2803721 GGCGACGGCTTCGTCAGGGTTTATGCTCTTGCAG--AGCTCTTTCCCGTTGAAGAAATCC 2803664
Query 517675 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734
|| || | |||| || || || || | || || || ||||| || | || ||
Sbjct 2803663 TGCAATA-GTTGCTGGACTTTGGGGATTMTTGTGGAACCGCCTACTAAAACGACGTCGTG 2803605
Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794
|| ||| || || | ||| ||||| | | ||| || || || || | ||
Sbjct 2803604 AACTTGTCCCTTGTCAATTTTGGAATCTCGCAGACATTTCTCCACTGGCTCCATACATCT 2803545
Query 517795 TCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 517852
||| |||| || || ||| ||| |||||| | ||||| |||| ||| | | ||
Sbjct 2803544 TCTGAACAGATCCATGTTCAA--TTCCTCGAATCTCGCTCTGGTAATTGTGGCGTAGAAA 2803487
Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912
|| || |||||| | | ||||| | ||| || || ||||| || | |||||||| |
Sbjct 2803486 TCGATCCCTTCGTAGAGCGAATCGATTTCGATTGTGGTTTGCGTTGTGGAAGATAGAGTT 2803427
Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA 517972
||||| || | ||| || || || || || | || | ||| | | ||||| | |
Sbjct 2803426 CGTTTCGCTCTTTCGCAGGCCGTTCTCAGCCGACGGAGAGCTCTGG--GATTGCCGCTGA 2803369
Query 517973 TCTGTTT--TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030
| | || | | ||| || ||||| || | | | | || || || ||||| |
Sbjct 2803368 TGTCCTTCTTGTGTTTCCTTTTGAACTCCGCCGCGAAGTGGTTCACGAGGCGGTTATCGA 2803309
Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090
|||| || || || | | ||| | ||| | || ||| | |||| ||| | ||| | |
Sbjct 2803308 AATCCTCGCCGCCGAGATGAGTGTCTCCGGCGGTGGCTTTCACTTCGAAGATTCCTTACT 2803249
Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150
| | | ||| || | || ||| ||||| || || | ||| || || || || |||
Sbjct 2803248 CGATCGTCAACAGTGAAACGTCAAAAGTTCCGCCGCCGAGATCGAAGATCAGAACGTTCT 2803189
Query 518151 TTTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204
||||| | || || || || | || || || | ||||| ||||||||||
Sbjct 2803188 TTTCTCCGGAGCGGGAGGCTTTCTTGTCCAAGCCGTAAGCTATGGCAGCGGCAGTTGGTT 2803129
Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264
| || || |||||||| ||||| ||||| ||||| ||| || || || || || || |
Sbjct 2803128 CGTTGATGATTCTCAACACATTCAGACCGGCAATGGCTCCGGCGTCCTTGGTAGCCTGCC 2803069
Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC 518313
|| |||||||||||||||||||| || ||||| ||||| | | ||||
Sbjct 2803068 GCTGCGAATCGTTAAAATATGCAGGGACTGTAATCACGGCGTTATTTAC 2803020
Score = 91.5 bits (100), Expect = 1e-12
Identities = 180/264 (68%), Gaps = 2/264 (1%)
Strand=Plus/Minus
Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACC 518505
|| || ||||||||| |||||||| |||||| ||| | ||||| | ||
Sbjct 2802792 ACCTTGAATGGCCAGAGCTTCATATCGCTTTGAACGGAAGAGTCGG-AGAATCTGCGGCC 2802734
Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565
||| | | || || || |||| |||||| ||||| || || | |||| |||||
Sbjct 2802733 AATGAGCCTCTTGGCGTCGAAAACAGTATTCTGCGGATTCATCGCGACCTGATTCTTGGC 2802674
Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625
||||| || ||||| |||| || || || || | || || || ||||| || | ||
Sbjct 2802673 CGCATCGCCGATCAGTCGTTCGGTATCGGTGAAAGCGACGTAGGAGGGAGTGGTTCTGTT 2802614
Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 518685
||||||||||| |||||||| || || | | |||||||| || | || || || |
Sbjct 2802613 GCCTTGATCATTGGCAATAATCTCTACACGATCGTTTTGCCAGACGGCGACGCAGCTGTA 2802554
Query 518686 AGTTGTTCCTAAATCAATACCAAT 518709
|| || || | |||||| || ||
Sbjct 2802553 GGTGGTGCCGAGATCAATGCCGAT 2802530
>seq56
Length=1171948
Score = 109 bits (120), Expect = 4e-18
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| | || ||||||||||| ||||| || |||||||| | ||||| | |||||||
Sbjct 1047874 CCATAAGAAAGTGCAGCAGCAGTGGGTTCGTTGATAATTCTAAGAACATCCAAACCAGCA 1047933
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
|| || || || || || || |||||||| |||| ||| || ||||| || |||||||||
Sbjct 1047934 ATCCTGCCAGCGTCCTTTGTTGCTTGTCTCTGTGCATCATTGAAATAAGCCGGAACAGTA 1047993
Query 518297 ATAACGGC 518304
|| || ||
Sbjct 1047994 ATCACAGC 1048001
Score = 96.9 bits (106), Expect = 3e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303
|| || | ||| || || ||||| ||||| || || ||| |||||||||| ||||| |||
Sbjct 1047874 CCATAAGAAAGTGCAGCAGCAGTGGGTTCGTTGATAATTCTAAGAACATCCAAACCAGCA 1047933
Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363
|| | ||| || ||||||||||||||||| ||||| ||||| || || ||||||
Sbjct 1047934 ATCCTGCCAGCGTCCTTTGTTGCTTGTCTCTGTGCATCATTGAAATAAGCCGGAACAGTA 1047993
Query 322364 ATAACTGCTTT 322374
|| || || ||
Sbjct 1047994 ATCACAGCCTT 1048004
>seq7
Length=5085854
Score = 105 bits (116), Expect = 5e-17
Identities = 232/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 517601 TGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTA 517660
|||| ||||||||| || |||||||| ||||| || |||| ||| | || | ||
Sbjct 4129348 TGAACAGCAGCACCGTAAGCAACAGCCTCATCGGGGTTAATGCTTTTACAGAGCTCCTTC 4129289
Query 517661 CCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAAC 517719
|| ||||| ||| || || ||| || || || ||||| | | ||||| || ||
Sbjct 4129288 CCGTTGAAGTAATCCTGCAA-AAGCTGCTGAACTTTCGGAATTCTTGTCGATCCACCGAC 4129230
Query 517720 TAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 517779
|| || | ||||| || || |||||| | ||| | ||| | ||| |||||
Sbjct 4129229 CAAAACGACCTCATGAACTTGGATTTTATCGATTTTAGCATCACGGATGCATTTCTCAAC 4129170
Query 517780 GGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG 517839
||||| | || | | |||| || ||| | ||| |||||| |||| || || |
Sbjct 4129169 TGGTTCCATACACTTCATGAACATATCCATACACAATTCCTCGAATCTAGCCCTCGTTAT 4129110
Query 517840 AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA 517899
|| ||| | |||||||||||| | | |||||||||||||||||| || || || |
Sbjct 4129109 CGTCGCATAGAAGTCAATTCCTTCGTAAAGAGAATCAACTTCAATCGTCGTCTGCGTGGT 4129050
Query 517900 AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCT 517944
|| || || || | ||| || | || || || ||||| || ||
Sbjct 4129049 CGATGAGAGCGCTCTTTTTGCTCTCTCGCAGGCGGTCCTCAGCCT 4129005
>seq117
Length=705152
Score = 102 bits (112), Expect = 6e-16
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || |||| ||||| || || | ||||||||| |||||||| ||||| | ||||||
Sbjct 687008 TTCTTTTCAAATCCATAAGCTAATGAAGCAGCAGTGGGTTCATTGATAATACGCAAAACT 686949
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
| ||||||||||| | || ||||| || ||||| |||||| ||||| || || ||
Sbjct 686948 TCGAGACCAGCAATACGACCAGCATCCTTTGTGGCCGTTCTTTGAGAATCATTGAAGTAG 686889
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTT 518315
||||| || || | || || | |||||||
Sbjct 686888 GCAGGCACGGTCACGACAGCCTTTGTTACTT 686858
>seq39
Length=1364243
Score = 95.1 bits (104), Expect = 9e-14
Identities = 177/258 (69%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088
||| |||| ||||||||| | ||| | ||| || || || | |||| ||||
Sbjct 508447 AAATTCTT-ACCTCCCAAGTGAGTGTCTCCGTTTGTGGCAAGAACCTCAAAAACACCATT 508505
Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
|||| | ||| | | | |||||| ||||||||||| | ||||||| ||| | |||
Sbjct 508506 GTCAATGGTCAAGATACTGACATCAAAAGTTCCACCACCAAGGTCAAAAACAAGGATATT 508565
Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208
| | || ||| | || || | ||||||||||| ||||| || || || |||||
Sbjct 508566 CTTCTCGCCACCTT---TCTTGTCCAAACCATACGCAATGGCAGCCGCGGTGGGCTCATT 508622
Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268
|| || || ||| || || |||||||| | || ||||| || || ||||| |||||
Sbjct 508623 GATGATCCTGGCAACGTTGAGGCCAGCAATAATACCGGCATCCTTGGTTGCTTGCCTTTG 508682
Query 518269 TGAATCGTTAAAATATGC 518286
| ||| || || || ||
Sbjct 508683 GGCATCATTGAAGTAAGC 508700
>seq36
Length=1471653
Score = 91.5 bits (100), Expect = 1e-12
Identities = 123/170 (72%), Gaps = 1/170 (1%)
Strand=Plus/Plus
Query 668854 AGGTAAAG-AAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCAC 668912
||| |||| ||||||| || ||||| || ||||||||||||||||| ||| | || |||
Sbjct 1267740 AGGCAAAGGAAGGTCGGATCAGAGGTAACTTGATGGGAAAACGTGTGGATTTTTCAGCAA 1267799
Query 668913 GTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTA 668972
| |||||||| || ||||||| | ||| | | ||||| | || || || | ||
Sbjct 1267800 GAACAGTTATCACACCTGATCCAACAATTAATATTGATGAATTGGGAGTGCCGTGGAGTA 1267859
Query 668973 TTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAG 669022
||||| |||||||| | | || | ||| ||| | ||||||| |||
Sbjct 1267860 TTGCTTTGAATCTTACATATCCAGAGACTGTGACACCATATAATATAGAG 1267909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780770196294712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |