Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_015283.1
Length=176428
Score E
Sequences producing significant alignments: (Bits) Value
seq609 491 5e-134
seq424 452 4e-122
seq850 170 2e-37
seq76 156 5e-33
seq8 138 1e-27
seq55 132 5e-26
seq96 123 3e-23
seq299 96.9 4e-15
seq84 84.2 2e-11
seq23 84.2 2e-11
>seq609
Length=9483
Score = 491 bits (544), Expect = 5e-134
Identities = 607/832 (73%), Gaps = 0/832 (0%)
Strand=Plus/Plus
Query 168651 CTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCG 168710
||||| | || |||||||| || || || ||||| || | || |||| || || |
Sbjct 4331 CTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATTG 4390
Query 168711 GTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTG 168770
| | ||||| ||| | || |||||||| ||| | | ||||| |||||||| |||||||
Sbjct 4391 GGTTGCACTTTTACMCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTG 4450
Query 168771 GTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGAC 168830
||||||| || | | | | |||||| || | || | | ||||||||| ||
Sbjct 4451 GTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAG 4510
Query 168831 AGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 168890
|||||||| | | | | || |||||| |||||||| |||||| |||||||| |
Sbjct 4511 AGTGGGAACTTAGTTTCCGTCTGGGTATGCKTCCTTGGATTGCTGTTGCATATTCAGCTC 4570
Query 168891 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTG 168950
| || | || || ||| || ||| | | |||||| ||||||| || || ||||
Sbjct 4571 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTG 4630
Query 168951 ATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGC 169010
| ||||||||||||||||| ||||| || |||||||||||| | |||||||| || ||||
Sbjct 4631 ACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 4690
Query 169011 ACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTC 169070
||||||| |||||||| || || || ||| ||| |||| ||| | ||||| || || |
Sbjct 4691 ACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGTTGGTGTATTCGGCGGCTCCC 4750
Query 169071 TATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGG 169130
||||| || ||||||||||| | ||||| ||| | | ||||| || || || ||
Sbjct 4751 TATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 4810
Query 169131 AAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTG 169190
| |||||| || | ||||||| ||||| ||||| |||||||| |||||||| || |
Sbjct 4811 ATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAG 4870
Query 169191 CAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAA 169250
| || ||||| || || || |||| |||||||| ||||| ||||||||||| || |
Sbjct 4871 CTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 4930
Query 169251 GTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTA 169310
| | || ||||||||||| | | || || ||| || | ||||| ||| || | ||||
Sbjct 4931 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTA 4990
Query 169311 TCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTA 169370
| | || ||||| |||||||| || || || || || |||||||| || || || |
Sbjct 4991 TTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTSATAGTC 5050
Query 169371 ACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAG 169430
| ||| | ||| ||| |||| ||| | ||||| | || || |||||||||||||
Sbjct 5051 AAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAG 5110
Query 169431 TAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGCATCTGCTGA 169482
| |||||||| ||||| |||||||||||||| ||||||||||| ||| |||
Sbjct 5111 TTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 5162
>seq424
Length=105662
Score = 452 bits (500), Expect = 4e-122
Identities = 591/822 (72%), Gaps = 2/822 (0%)
Strand=Plus/Plus
Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550
||||| | ||| |||| |||||||| ||| | ||||| |||| ||||| ||||| ||
Sbjct 94874 TTCTGTAACTGGATAACCAGCACTAAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTR 94933
Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609
|||||||| ||||| || ||| | | ||| || ||| || | || |||||||| ||
Sbjct 94934 ATGATCCCTACCTTATTGACYGCAACTTC-TGTATTTATTATTRCCTTCATTGCTGCTCC 94992
Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669
|| | ||||| || || || || |||||||| | || ||||| | || ||||||||
Sbjct 94993 TCCAATAGATATTGATGGTATTAGTGAACCTGTTTCTGGATCTCTAYTTTACGGAAACAA 95052
Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729
|| || || ||||| || | || |||| || || || | ||||| ||| | ||
Sbjct 95053 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACYCGAT 95112
Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789
|||||||| ||| | | ||||| |||||||| |||||||||||||| || | | |
Sbjct 95113 ATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 95172
Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849
| |||||| || | || | | |||||||||||| |||||||| | | | |
Sbjct 95173 TCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTAGAGAGTGGGAACTTAGTTTCCG 95232
Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909
|| |||||| | |||||||| |||||| |||||||| || || | || || | |
Sbjct 95233 TCTGGGTATGYGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTRC 95292
Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969
|| ||| | | |||||| ||||| | || || | ||| |||||||||||||||||
Sbjct 95293 TGTTTTCTTRATMTACCCAATTGGTMAAGGAAGCTTTTMTGACGGTATGCCTCTAGGAAT 95352
Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029
||||| || |||||||||||| | |||||||| | ||||||||||| |||||||| ||
Sbjct 95353 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGACTGAGCACAACATCCTTATGCACCC 95412
Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089
|| || ||| || ||||| ||| | ||||| | || |||||| || ||||||||
Sbjct 95413 ATTTCACATGTTAGSTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 95472
Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149
||| | ||||| ||| | | ||||| || || || || | |||||| || | ||
Sbjct 95473 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 95532
Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209
||||| ||||| ||||| |||||||| |||||||| || || || ||||| || || ||
Sbjct 95533 TTACATATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 95592
Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269
|||| |||||||| ||||| ||||||||||| || | | | || |||||||| ||
Sbjct 95593 CCGATTTATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTTGC 95652
Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTAT 169311
| | || || ||| || | ||||| ||| || | |||||
Sbjct 95653 TGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTAT 95694
Score = 408 bits (452), Expect = 5e-109
Identities = 542/756 (72%), Gaps = 2/756 (0%)
Strand=Plus/Minus
Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550
||||| | ||| |||| |||||| | ||| ||||| |||| ||||| ||||| ||
Sbjct 27445 TTCTGTAACTGGATAACCAGCACTGAAAACYRTCTTTAYATTGGATGGTTTGGTGTTTTG 27386
Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609
|||||||| ||||| || ||| | | ||| || ||| |||| || |||||||| ||
Sbjct 27385 ATGATCCCTACCTTATTGACYGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCC 27327
Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669
|| || | ||| || || || | |||||||| || ||||| | || ||||||||
Sbjct 27326 TCCAGTAGRTATTGATGGTATTMGTGAACCTGTTTMTGGATCTCTAYTTTACGGAAACAA 27267
Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729
|| || || ||||| || | || |||| || || || | ||||| ||||| ||
Sbjct 27266 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACCCGAT 27207
Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789
|||||||| ||| | ||||| |||||||| |||||||||||||| || | | |
Sbjct 27206 ATGGGAAGCTGCTTYCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 27147
Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849
| ||| || || | || | | ||||||||| || |||||||| | | | |
Sbjct 27146 TCTACACWTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCG 27087
Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909
|| |||||| | |||||||| |||||| |||||||| || || | || || |||
Sbjct 27086 TCTGGGTATGTGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 27027
Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969
|| ||| | | |||||| ||||| | || || ||||| |||||||||||||||||
Sbjct 27026 TGTTTTCTTGATCTACCCAATTGGTAAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 26967
Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029
||||| || |||||||||||| | || ||||| || ||||||||||| |||||||| ||
Sbjct 26966 CTCTGGTACTTTCAACTTCATGATTGTGTTCCAGGCTGAGCACAACATCCTTATGCACCC 26907
Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089
|| || ||| ||| ||||| ||| | ||||| | || |||||| || ||||||||
Sbjct 26906 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 26847
Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149
||| | ||||| ||| | | |||| || || | || | |||||| || | |
Sbjct 26846 TTCCTTGGTAACTTCTAGTTTGATCAAGGAAACCATAGAAAATGAATCTGCTAATGAAGT 26787
Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209
||||| ||||| ||||| |||||||| |||||||| || || || |||| || || ||
Sbjct 26786 TTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTATGGTTATTTTGG 26727
Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245
|||| |||||||| ||||| ||||||||||| ||
Sbjct 26726 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTC 26691
>seq850
Length=2209
Score = 170 bits (188), Expect = 2e-37
Identities = 212/288 (74%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550
||||| | ||| |||| |||||| | ||| | |||||| |||| ||||| ||||| ||
Sbjct 28 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTG 87
Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609
|||||||| ||||| || ||| | | ||| || ||| |||| || |||||||| ||
Sbjct 88 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCC 146
Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669
|| || ||||| || || || | |||||||| | || ||||| | || ||||||||
Sbjct 147 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 206
Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729
|| || || ||||| || | || |||| || || || | ||||| ||||| ||
Sbjct 207 TATTATWTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTTGCACTTTTACCCGAT 266
Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTA 168777
|||||||| ||| | | ||||| |||||||| ||||||||||||||
Sbjct 267 ATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTA 314
>seq76
Length=1023076
Score = 156 bits (172), Expect = 5e-33
Identities = 184/249 (74%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 169234 TTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATG 169293
||||||||| || | | | || ||||||||||| | | || || ||| || | ||
Sbjct 1004308 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 1004367
Query 169294 GTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCA 169353
||| ||| || | ||||| | || ||||| |||||||| || || || || || |||||
Sbjct 1004368 GTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCA 1004427
Query 169354 ATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGC 169413
||| || || ||| | | ||| | ||| ||| |||| ||| | ||||| | ||
Sbjct 1004428 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGC 1004487
Query 169414 AAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGC 169473
|| |||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||
Sbjct 1004488 TAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGC 1004547
Query 169474 ATCTGCTGA 169482
||| |||
Sbjct 1004548 TGCTGTTGA 1004556
>seq8
Length=4047118
Score = 138 bits (152), Expect = 1e-27
Identities = 217/308 (70%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 168536 TGGTTCGGTGTCTTAATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGC 168594
||||| ||||| || |||||||| ||||| || ||| | | ||| || ||| |||
Sbjct 2331942 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGT 2332000
Query 168595 ATTTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCT 168654
|| |||||||| || || || ||||| || | || | |||||||| | || ||||
Sbjct 2332001 CTTCATTGCTGCTCCTCCAGTAGATATTGATAGTATTCGTGAACCTGTTTCTGGATCTCT 2332060
Query 168655 AATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCT 168714
| | || |||||||| || || || ||||| || | || |||| || || || |
Sbjct 2332061 ACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTT 2332120
Query 168715 ACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCC 168774
||||| ||||| || |||||||| ||| | | ||||| |||||||| |||||||||||
Sbjct 2332121 GCACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCC 2332180
Query 168775 TTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTG 168834
||| || | | | | |||||| || | || | | ||||||||| || ||||
Sbjct 2332181 TTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTG 2332240
Query 168835 GGAATTAT 168842
|||| |||
Sbjct 2332241 GGAACTAT 2332248
>seq55
Length=1179671
Score = 132 bits (146), Expect = 5e-26
Identities = 219/316 (69%), Gaps = 9/316 (3%)
Strand=Plus/Plus
Query 169157 TTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTA 169216
|||| || || |||||||| |||||||| || | ||||| || || || |||
Sbjct 344074 TTCGAGCACGAGGAAGAAACTTATAATATCGTA----CTCATGGTTATTTTGGCCAATTT 344129
Query 169217 ATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTC 169276
|||||||| ||||| ||||||||||| || | | || |||||| |||| | |
Sbjct 344130 ATCTTCCAATATGCTAGTTTCAACAATTCTCTTTCTTTACATTTCTTCTTAGCTGCTTGG 344189
Query 169277 CCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAAC 169336
|| | ||| || | ||||| || | | | | | ||| | |||||||| ||
Sbjct 344190 CCTGCAGTAGGTATCTGGTTCACGTTCACCG-----CGCATTATGACTTTCAACTTAAAT 344244
Query 169337 GGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGT 169396
|| || || || |||||||| || || ||| | | ||| | ||| ||| |||| |
Sbjct 344245 GGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTAATACTTGGGCT 344304
Query 169397 GACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAAC 169456
|| | ||||| | || || ||||||||| |||| |||||||| |||| |||||||||
Sbjct 344305 GATATTATTAACCGTGCTAATCTTGGTATGAAAGTTATGCATGAACGTAGTGCTCACAAC 344364
Query 169457 TTCCCACTAGACTTAG 169472
||||| |||||| |||
Sbjct 344365 TTCCCTCTAGACCTAG 344380
>seq96
Length=850568
Score = 123 bits (136), Expect = 3e-23
Identities = 175/246 (71%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 168716 CACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCT 168775
||||| ||||| || |||||||| ||| | | ||||| |||||||| ||||||||||||
Sbjct 64832 CACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCT 64773
Query 168776 TACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGG 168835
|| || | | | | |||||| || | || | | ||||||||| || |||||
Sbjct 64772 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGG 64713
Query 168836 GAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTA 168895
||| | | | | || |||||| | |||||||| |||||| |||||||| || ||
Sbjct 64712 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 64653
Query 168896 TCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGT 168955
| || || ||| || ||| | | |||||| ||||||| || || ||||| |||
Sbjct 64652 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGT 64593
Query 168956 ATGCCT 168961
||||||
Sbjct 64592 ATGCCT 64587
>seq299
Length=193022
Score = 96.9 bits (106), Expect = 4e-15
Identities = 196/286 (69%), Gaps = 10/286 (3%)
Strand=Plus/Minus
Query 168923 TACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTC 168982
|||||| ||||||| || || | | | |||||||||||||||| ||| | |||
Sbjct 156182 TACCCAATTGGTCAAGGAAGCTTTTTTCACGGTATGCCTCTAGGAACCTCTCATGCTTTC 156123
Query 168983 AACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCA 169042
||||||||| | |||||| | | ||||||||||| ||||||| || || || || |
Sbjct 156122 AACTTCATGATTGTATTCTAGACTGAGCACAACATCATTATGCACCCATTTCACATATTA 156063
Query 169043 GGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACA 169102
| ||||| || | ||||| || || || | ||||||||||| | |||||
Sbjct 156062 GATGTAGCCAGTGTATTCGG-CGACATCAAT-----GTTATGCATGGTTCTTTGGTAAC- 156010
Query 169103 TCTTCTCTAATCAGAGAGACTACTGAGGAAGAAT--CTCAGAACTATGGTTACAAGTTCG 169160
| || | | | || || || ||| ||| || || | ||||||| ||||
Sbjct 156009 TTTTAGTTTGTTAAAGGGAAAACCATAGAA-AATGGATCTTAATGAAGGTTACAGTTTCG 155951
Query 169161 GTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTT 169206
||||| |||||||| |||||||| || || || ||||| || ||
Sbjct 155950 AGCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTT 155905
>seq84
Length=945972
Score = 84.2 bits (92), Expect = 2e-11
Identities = 74/91 (81%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 168949 TGAT-GGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAG 169007
|||| ||||||||| ||||||| | ||| || |||||||||||| | ||||| || | |
Sbjct 55159 TGATCGGTATGCCTTTAGGAATATATGGTACTTTCAACTTCATGATTGTATTAAAAACTG 55100
Query 169008 AGCACAACATTCTTATGCATCCCTTCCATAT 169038
|||||||||| |||||||| || || || ||
Sbjct 55099 AGCACAACATCCTTATGCACCCATTTCACAT 55069
>seq23
Length=1845300
Score = 84.2 bits (92), Expect = 2e-11
Identities = 109/148 (74%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 169325 TTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGAT-GTTAACGGTAAGATCAT 169383
|||||||| || || ||||| || |||||||| || || ||| ||||| ||| | ||
Sbjct 1114935 TTCAACTTAAATGGTTTTAATTTCAACCAATCTGTAGTTGATAGTTAA-GGTCGTGTAAT 1114877
Query 169384 TCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCG 169443
| || || || | | | |||| | | || |||||||||||||| |||||||| |
Sbjct 1114876 TTATATATAGGCTAATATTATTAAGTGTGTTAATCTTGGTATGGAAGTTATGCATGAAAG 1114817
Query 169444 TAACGCTCACAACTTCCCACTAGACTTA 169471
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Sbjct 1114816 TAATGCTCACAGCTTCCCTCTACACCTA 1114789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564434177592960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |