Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq609 491 5e-134 seq424 452 4e-122 seq850 170 2e-37 seq76 156 5e-33 seq8 138 1e-27 seq55 132 5e-26 seq96 123 3e-23 seq299 96.9 4e-15 seq84 84.2 2e-11 seq23 84.2 2e-11 >seq609 Length=9483 Score = 491 bits (544), Expect = 5e-134 Identities = 607/832 (73%), Gaps = 0/832 (0%) Strand=Plus/Plus Query 168651 CTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCG 168710 ||||| | || |||||||| || || || ||||| || | || |||| || || | Sbjct 4331 CTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATTG 4390 Query 168711 GTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTG 168770 | | ||||| ||| | || |||||||| ||| | | ||||| |||||||| ||||||| Sbjct 4391 GGTTGCACTTTTACMCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTG 4450 Query 168771 GTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGAC 168830 ||||||| || | | | | |||||| || | || | | ||||||||| || Sbjct 4451 GTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAG 4510 Query 168831 AGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 168890 |||||||| | | | | || |||||| |||||||| |||||| |||||||| | Sbjct 4511 AGTGGGAACTTAGTTTCCGTCTGGGTATGCKTCCTTGGATTGCTGTTGCATATTCAGCTC 4570 Query 168891 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTG 168950 | || | || || ||| || ||| | | |||||| ||||||| || || |||| Sbjct 4571 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTG 4630 Query 168951 ATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGC 169010 | ||||||||||||||||| ||||| || |||||||||||| | |||||||| || |||| Sbjct 4631 ACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 4690 Query 169011 ACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTC 169070 ||||||| |||||||| || || || ||| ||| |||| ||| | ||||| || || | Sbjct 4691 ACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGTTGGTGTATTCGGCGGCTCCC 4750 Query 169071 TATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGG 169130 ||||| || ||||||||||| | ||||| ||| | | ||||| || || || || Sbjct 4751 TATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 4810 Query 169131 AAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTG 169190 | |||||| || | ||||||| ||||| ||||| |||||||| |||||||| || | Sbjct 4811 ATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAG 4870 Query 169191 CAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAA 169250 | || ||||| || || || |||| |||||||| ||||| ||||||||||| || | Sbjct 4871 CTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 4930 Query 169251 GTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTA 169310 | | || ||||||||||| | | || || ||| || | ||||| ||| || | |||| Sbjct 4931 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTA 4990 Query 169311 TCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTA 169370 | | || ||||| |||||||| || || || || || |||||||| || || || | Sbjct 4991 TTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTSATAGTC 5050 Query 169371 ACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAG 169430 | ||| | ||| ||| |||| ||| | ||||| | || || ||||||||||||| Sbjct 5051 AAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAG 5110 Query 169431 TAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGCATCTGCTGA 169482 | |||||||| ||||| |||||||||||||| ||||||||||| ||| ||| Sbjct 5111 TTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 5162 >seq424 Length=105662 Score = 452 bits (500), Expect = 4e-122 Identities = 591/822 (72%), Gaps = 2/822 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||||| ||| | ||||| |||| ||||| ||||| || Sbjct 94874 TTCTGTAACTGGATAACCAGCACTAAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTR 94933 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| || | || |||||||| || Sbjct 94934 ATGATCCCTACCTTATTGACYGCAACTTC-TGTATTTATTATTRCCTTCATTGCTGCTCC 94992 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || | ||||| || || || || |||||||| | || ||||| | || |||||||| Sbjct 94993 TCCAATAGATATTGATGGTATTAGTGAACCTGTTTCTGGATCTCTAYTTTACGGAAACAA 95052 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || | || |||| || || || | ||||| ||| | || Sbjct 95053 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACYCGAT 95112 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| ||| | | ||||| |||||||| |||||||||||||| || | | | Sbjct 95113 ATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 95172 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | |||||| || | || | | |||||||||||| |||||||| | | | | Sbjct 95173 TCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTAGAGAGTGGGAACTTAGTTTCCG 95232 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| | |||||||| |||||| |||||||| || || | || || | | Sbjct 95233 TCTGGGTATGYGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTRC 95292 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | |||||| ||||| | || || | ||| ||||||||||||||||| Sbjct 95293 TGTTTTCTTRATMTACCCAATTGGTMAAGGAAGCTTTTMTGACGGTATGCCTCTAGGAAT 95352 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 ||||| || |||||||||||| | |||||||| | ||||||||||| |||||||| || Sbjct 95353 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGACTGAGCACAACATCCTTATGCACCC 95412 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 || || ||| || ||||| ||| | ||||| | || |||||| || |||||||| Sbjct 95413 ATTTCACATGTTAGSTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 95472 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | ||||| || || || || | |||||| || | || Sbjct 95473 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 95532 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 ||||| ||||| ||||| |||||||| |||||||| || || || ||||| || || || Sbjct 95533 TTACATATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 95592 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||| |||||||| ||||| ||||||||||| || | | | || |||||||| || Sbjct 95593 CCGATTTATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTTGC 95652 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTAT 169311 | | || || ||| || | ||||| ||| || | ||||| Sbjct 95653 TGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTAT 95694 Score = 408 bits (452), Expect = 5e-109 Identities = 542/756 (72%), Gaps = 2/756 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| ||||| |||| ||||| ||||| || Sbjct 27445 TTCTGTAACTGGATAACCAGCACTGAAAACYRTCTTTAYATTGGATGGTTTGGTGTTTTG 27386 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| |||| || |||||||| || Sbjct 27385 ATGATCCCTACCTTATTGACYGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCC 27327 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || | ||| || || || | |||||||| || ||||| | || |||||||| Sbjct 27326 TCCAGTAGRTATTGATGGTATTMGTGAACCTGTTTMTGGATCTCTAYTTTACGGAAACAA 27267 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || | || |||| || || || | ||||| ||||| || Sbjct 27266 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACCCGAT 27207 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| ||| | ||||| |||||||| |||||||||||||| || | | | Sbjct 27206 ATGGGAAGCTGCTTYCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 27147 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | ||| || || | || | | ||||||||| || |||||||| | | | | Sbjct 27146 TCTACACWTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCG 27087 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 27086 TCTGGGTATGTGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 27027 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | |||||| ||||| | || || ||||| ||||||||||||||||| Sbjct 27026 TGTTTTCTTGATCTACCCAATTGGTAAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 26967 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 ||||| || |||||||||||| | || ||||| || ||||||||||| |||||||| || Sbjct 26966 CTCTGGTACTTTCAACTTCATGATTGTGTTCCAGGCTGAGCACAACATCCTTATGCACCC 26907 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 || || ||| ||| ||||| ||| | ||||| | || |||||| || |||||||| Sbjct 26906 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 26847 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | |||| || || | || | |||||| || | | Sbjct 26846 TTCCTTGGTAACTTCTAGTTTGATCAAGGAAACCATAGAAAATGAATCTGCTAATGAAGT 26787 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 ||||| ||||| ||||| |||||||| |||||||| || || || |||| || || || Sbjct 26786 TTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTATGGTTATTTTGG 26727 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245 |||| |||||||| ||||| ||||||||||| || Sbjct 26726 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTC 26691 >seq850 Length=2209 Score = 170 bits (188), Expect = 2e-37 Identities = 212/288 (74%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | |||||| |||| ||||| ||||| || Sbjct 28 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTG 87 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| |||| || |||||||| || Sbjct 88 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCC 146 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | |||||||| | || ||||| | || |||||||| Sbjct 147 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 206 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || | || |||| || || || | ||||| ||||| || Sbjct 207 TATTATWTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTTGCACTTTTACCCGAT 266 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTA 168777 |||||||| ||| | | ||||| |||||||| |||||||||||||| Sbjct 267 ATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTA 314 >seq76 Length=1023076 Score = 156 bits (172), Expect = 5e-33 Identities = 184/249 (74%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 169234 TTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATG 169293 ||||||||| || | | | || ||||||||||| | | || || ||| || | || Sbjct 1004308 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 1004367 Query 169294 GTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCA 169353 ||| ||| || | ||||| | || ||||| |||||||| || || || || || ||||| Sbjct 1004368 GTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCA 1004427 Query 169354 ATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGC 169413 ||| || || ||| | | ||| | ||| ||| |||| ||| | ||||| | || Sbjct 1004428 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGC 1004487 Query 169414 AAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGC 169473 || |||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| Sbjct 1004488 TAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGC 1004547 Query 169474 ATCTGCTGA 169482 ||| ||| Sbjct 1004548 TGCTGTTGA 1004556 >seq8 Length=4047118 Score = 138 bits (152), Expect = 1e-27 Identities = 217/308 (70%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 168536 TGGTTCGGTGTCTTAATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGC 168594 ||||| ||||| || |||||||| ||||| || ||| | | ||| || ||| ||| Sbjct 2331942 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGT 2332000 Query 168595 ATTTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCT 168654 || |||||||| || || || ||||| || | || | |||||||| | || |||| Sbjct 2332001 CTTCATTGCTGCTCCTCCAGTAGATATTGATAGTATTCGTGAACCTGTTTCTGGATCTCT 2332060 Query 168655 AATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCT 168714 | | || |||||||| || || || ||||| || | || |||| || || || | Sbjct 2332061 ACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTT 2332120 Query 168715 ACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCC 168774 ||||| ||||| || |||||||| ||| | | ||||| |||||||| ||||||||||| Sbjct 2332121 GCACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCC 2332180 Query 168775 TTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTG 168834 ||| || | | | | |||||| || | || | | ||||||||| || |||| Sbjct 2332181 TTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTG 2332240 Query 168835 GGAATTAT 168842 |||| ||| Sbjct 2332241 GGAACTAT 2332248 >seq55 Length=1179671 Score = 132 bits (146), Expect = 5e-26 Identities = 219/316 (69%), Gaps = 9/316 (3%) Strand=Plus/Plus Query 169157 TTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTA 169216 |||| || || |||||||| |||||||| || | ||||| || || || ||| Sbjct 344074 TTCGAGCACGAGGAAGAAACTTATAATATCGTA----CTCATGGTTATTTTGGCCAATTT 344129 Query 169217 ATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTC 169276 |||||||| ||||| ||||||||||| || | | || |||||| |||| | | Sbjct 344130 ATCTTCCAATATGCTAGTTTCAACAATTCTCTTTCTTTACATTTCTTCTTAGCTGCTTGG 344189 Query 169277 CCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAAC 169336 || | ||| || | ||||| || | | | | | ||| | |||||||| || Sbjct 344190 CCTGCAGTAGGTATCTGGTTCACGTTCACCG-----CGCATTATGACTTTCAACTTAAAT 344244 Query 169337 GGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGT 169396 || || || || |||||||| || || ||| | | ||| | ||| ||| |||| | Sbjct 344245 GGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTAATACTTGGGCT 344304 Query 169397 GACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAAC 169456 || | ||||| | || || ||||||||| |||| |||||||| |||| ||||||||| Sbjct 344305 GATATTATTAACCGTGCTAATCTTGGTATGAAAGTTATGCATGAACGTAGTGCTCACAAC 344364 Query 169457 TTCCCACTAGACTTAG 169472 ||||| |||||| ||| Sbjct 344365 TTCCCTCTAGACCTAG 344380 >seq96 Length=850568 Score = 123 bits (136), Expect = 3e-23 Identities = 175/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 168716 CACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCT 168775 ||||| ||||| || |||||||| ||| | | ||||| |||||||| |||||||||||| Sbjct 64832 CACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCT 64773 Query 168776 TACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGG 168835 || || | | | | |||||| || | || | | ||||||||| || ||||| Sbjct 64772 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGG 64713 Query 168836 GAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTA 168895 ||| | | | | || |||||| | |||||||| |||||| |||||||| || || Sbjct 64712 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 64653 Query 168896 TCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGT 168955 | || || ||| || ||| | | |||||| ||||||| || || ||||| ||| Sbjct 64652 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGT 64593 Query 168956 ATGCCT 168961 |||||| Sbjct 64592 ATGCCT 64587 >seq299 Length=193022 Score = 96.9 bits (106), Expect = 4e-15 Identities = 196/286 (69%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 168923 TACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTC 168982 |||||| ||||||| || || | | | |||||||||||||||| ||| | ||| Sbjct 156182 TACCCAATTGGTCAAGGAAGCTTTTTTCACGGTATGCCTCTAGGAACCTCTCATGCTTTC 156123 Query 168983 AACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCA 169042 ||||||||| | |||||| | | ||||||||||| ||||||| || || || || | Sbjct 156122 AACTTCATGATTGTATTCTAGACTGAGCACAACATCATTATGCACCCATTTCACATATTA 156063 Query 169043 GGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACA 169102 | ||||| || | ||||| || || || | ||||||||||| | ||||| Sbjct 156062 GATGTAGCCAGTGTATTCGG-CGACATCAAT-----GTTATGCATGGTTCTTTGGTAAC- 156010 Query 169103 TCTTCTCTAATCAGAGAGACTACTGAGGAAGAAT--CTCAGAACTATGGTTACAAGTTCG 169160 | || | | | || || || ||| ||| || || | ||||||| |||| Sbjct 156009 TTTTAGTTTGTTAAAGGGAAAACCATAGAA-AATGGATCTTAATGAAGGTTACAGTTTCG 155951 Query 169161 GTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTT 169206 ||||| |||||||| |||||||| || || || ||||| || || Sbjct 155950 AGCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTT 155905 >seq84 Length=945972 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 168949 TGAT-GGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAG 169007 |||| ||||||||| ||||||| | ||| || |||||||||||| | ||||| || | | Sbjct 55159 TGATCGGTATGCCTTTAGGAATATATGGTACTTTCAACTTCATGATTGTATTAAAAACTG 55100 Query 169008 AGCACAACATTCTTATGCATCCCTTCCATAT 169038 |||||||||| |||||||| || || || || Sbjct 55099 AGCACAACATCCTTATGCACCCATTTCACAT 55069 >seq23 Length=1845300 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 169325 TTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGAT-GTTAACGGTAAGATCAT 169383 |||||||| || || ||||| || |||||||| || || ||| ||||| ||| | || Sbjct 1114935 TTCAACTTAAATGGTTTTAATTTCAACCAATCTGTAGTTGATAGTTAA-GGTCGTGTAAT 1114877 Query 169384 TCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCG 169443 | || || || | | | |||| | | || |||||||||||||| |||||||| | Sbjct 1114876 TTATATATAGGCTAATATTATTAAGTGTGTTAATCTTGGTATGGAAGTTATGCATGAAAG 1114817 Query 169444 TAACGCTCACAACTTCCCACTAGACTTA 169471 ||| ||||||| |||||| ||| || || Sbjct 1114816 TAATGCTCACAGCTTCCCTCTACACCTA 1114789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564434177592960