Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq609 466 5e-127 seq424 443 6e-120 seq850 178 4e-40 seq8 158 4e-34 seq76 150 5e-32 seq55 149 2e-31 seq96 131 5e-26 seq299 82.4 2e-11 >seq609 Length=9483 Score = 466 bits (516), Expect = 5e-127 Identities = 606/837 (72%), Gaps = 2/837 (0%) Strand=Plus/Minus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| |||| || || ||||||||||||||||| ||||| ||||| ||||||||| Sbjct 5162 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 5103 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 ||||| || |||||||| | | ||| ||||| || || | | ||| | | | Sbjct 5102 CCAAGATTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATSA 5043 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || || || || ||||| || || || || | || |||||||||||| || || | | Sbjct 5042 ACTACAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 4983 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 | ||| | ||| || | || || ||||||| ||| ||||||||||||||| ||| | Sbjct 4982 GCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 4923 Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485 ||||| || |||||||| |||||||| | || ||||| || |||||||| || || || Sbjct 4922 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATA 4863 Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545 ||||| |||||||||||||| |||||| | || || | || ||| | | || Sbjct 4862 TTATAAGTTTCTTCCTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 4803 Query 5546 GTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCA 5605 ||||| | || | |||||| || | |||||||||||| ||| | | || Sbjct 4802 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 4743 Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| ||| | ||||| | |||||| || || ||||||||||| ||||| || ||| Sbjct 4742 CCGAATACACCAACTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 4683 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||| ||||| |||||||||||||| || ||||||||||| ||| || Sbjct 4682 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAG 4623 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGA 5784 ||||| || || | ||||| | || || || | ||||| | || ||||| || ||||| Sbjct 4622 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGA 4564 Query 5785 ATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCC 5844 |||||| || |||||| || |||| || | | | ||||||||||||| | || || Sbjct 4563 ATATGCAACAGCAATCCAAGGAMGCATACCCAGACGGAAACTAAGTTCCCACTCTCGACC 4504 Query 5845 CAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATT 5904 || |||| ||| | ||||| | |||||| | || | || | || || || ||||| Sbjct 4503 CATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATT 4444 Query 5905 GTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGC 5964 ||| | ||||||||| | || |||||||| || | || ||||| |||||||| || Sbjct 4443 GTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGKGTAAAAGTGCAACCCAATAGC 4384 Query 5965 GTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCC 6021 || | || | || ||| || || || || |||||||| || ||||||||||| Sbjct 4383 TGCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCC 4327 >seq424 Length=105662 Score = 443 bits (490), Expect = 6e-120 Identities = 599/839 (71%), Gaps = 3/839 (0%) Strand=Plus/Minus Query 5341 AAAAGCCA-TAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAG 5399 || ||||| ||||| || || | || ||| | ||| || | || || ||||||| || Sbjct 95711 AACAGCCAATAGTGCTAATACCTAAAGCGGTGAACCAGATACCTACTACAGGCCAAGCAG 95652 Query 5400 CCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCC 5459 | ||||||||||||||| ||| |||||| || |||||||| |||||||| | || | Sbjct 95651 CAAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAGATAAATCGGC 95592 Query 5460 CAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATC 5519 |||| || |||||||| || || || ||||| |||||||||||||| |||||| | || | Sbjct 95591 CAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGCCCGAATATGTAAC 95532 Query 5520 CATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTC 5579 | | || ||| | | || ||||| | || | |||||| || | | Sbjct 95531 CTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAAC 95472 Query 5580 CATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACG 5639 ||||||||||| ||| | | | |||||||| ||||| ||| | | |||||| || | Sbjct 95471 CATGCATAGCACTGAATAGGGAGCYGCCGAATACACCAGCTACASCTAACATGTGAAATG 95412 Query 5640 GATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGA 5699 | ||||||||||| ||||| || | ||||||||| | ||| ||||| ||||||||||||| Sbjct 95411 GGTGCATAAGGATGTTGTGCTCAGTCTGGAATACAATCATGAAGTTGAAAGTACCAGAGA 95352 Query 5700 TACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG 5759 | || ||||||||||| ||| || ||||| | || | ||||| | || || || | Sbjct 95351 TTCCTAGAGGCATACCGTCAKAAAAGCTTCCTTKACCAATTGGGTAKATYAAGAAAACAG 95292 Query 5760 -AGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAAT 5818 ||||| | || ||||| || ||||||||||| || |||||| || | ||| || | Sbjct 95291 YAGTAG-CAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACRCATACCCAGA 95233 Query 5819 CTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAG 5878 | | ||||||||||||| | | |||| |||| ||| | ||||| | |||||| | Sbjct 95232 CGGAAACTAAGTTCCCACTCTCTACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGA 95173 Query 5879 ACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAG 5938 || | || | || || || |||||||| | ||||||||| | || |||||||| Sbjct 95172 ACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCAT 95113 Query 5939 ATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATG 5998 || | || ||||| ||||| || || || | || | || ||| || || || || Sbjct 95112 ATCGRGTAAAAGTGCAACCCRATAGCTGCAGAAGTAGGGATAATGGCACCAGAAATAATA 95053 Query 5999 TTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGG 6058 |||||||| || | ||||||||| | || ||||||| || || || || || | ||| Sbjct 95052 TTGTTTCCGTAAARTAGAGATCCAGAAACAGGTTCACTAATACCATCAATATCTATTGGA 94993 Query 6059 GGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATT 6118 || ||||| | ||| | | |||||| ||| |||||| || || | | || ||||| Sbjct 94992 GGAGCAGCAATGAAGGYAATAATAAATACAGAAGTTGCRGTCAATAAGGTAGGGATCATY 94933 Query 6119 AAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || ||||||||||| || | || || ||||| || ||||| || | ||||| |||||| Sbjct 94932 AAAACACCAAACCATCCAATGTAAAGACGGTTTTTAGTGCTGGTTATCCAGTTACAGAA 94874 Score = 390 bits (432), Expect = 3e-104 Identities = 548/774 (71%), Gaps = 2/774 (0%) Strand=Plus/Plus Query 5405 AAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAG 5464 |||||||||||| ||| |||||| || |||||||| |||||||| | || ||||| Sbjct 26673 AAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAA 26732 Query 5465 TAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAG 5524 || |||| ||| || || || ||||| |||||||||||||| |||||| | || | | Sbjct 26733 TAACCATAAGCAGCTACGATATTATAAGTTTCTTCCTCTTGCCCGAATCTGTAAACTTCA 26792 Query 5525 TTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGC 5584 || ||| | | | ||||| || | |||||| || | |||||| Sbjct 26793 TTAGCAGATTCATTTTCTATGGTTTCCTTGATCAAACTAGAAGTTACCAAGGAACCATGC 26852 Query 5585 ATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGC 5644 |||||| ||| | | | |||||||| ||||| ||||| | |||||| || || ||| Sbjct 26853 ATAGCACTGAATAGGGAGCYGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGC 26912 Query 5645 ATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCA 5704 |||||||| ||||| || |||||||| || | ||| ||||| |||||||||||||| || Sbjct 26913 ATAAGGATGTTGTGCTCAGCCTGGAACACAATCATGAAGTTGAAAGTACCAGAGATTCCT 26972 Query 5705 AGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTA 5763 ||||||||||| ||| || ||||| | || | ||||| | || || || | |||| Sbjct 26973 AGAGGCATACCGTCAGAAAAGCTTCCTTTACCAATTGGGTAGATCAAGAAAACAGCAGTA 27032 Query 5764 GGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTA 5823 || || ||||| || ||||||||||| || |||||| || | ||| || | | | | Sbjct 27033 -GCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACACATACCCAGACGGAA 27091 Query 5824 ACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGAC 5883 |||||||||||| | || |||| |||| ||| | ||||| | || ||| | || | Sbjct 27092 ACTAAGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAWGTGTAGAACAAT 27151 Query 5884 GAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGG 5943 || | || || || |||||||| | ||||||||| | || |||||||| || || Sbjct 27152 TAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGRAAGCAGCTTCCCATATCGG 27211 Query 5944 ATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTT 6003 || ||||| ||||| || || || | || | || ||| || || || || ||||| Sbjct 27212 GTAAAAGTGCAACCCRATAGCTGCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTT 27271 Query 6004 TCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGC 6063 ||| || | ||||||||| || ||||||| || || || || | ||||| || || Sbjct 27272 TCCGTAAARTAGAGATCCAKAAACAGGTTCACKAATACCATCAATAYCTACTGGAGGAGC 27331 Query 6064 AGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGAC 6123 ||| | ||| || | |||||| ||| |||||| || || | | || ||||| || || Sbjct 27332 AGCAATGAAGGCAATAATAAATACAGAAGTTGCRGTCAATAAGGTAGGGATCATCAAAAC 27391 Query 6124 ACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 ||||||||| || | || || ||| | ||||| || | ||||| |||||| Sbjct 27392 ACCAAACCATCCAATRTAAAGAYRGTTTTCAGTGCTGGTTATCCAGTTACAGAA 27445 >seq850 Length=2209 Score = 178 bits (196), Expect = 4e-40 Identities = 211/287 (74%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 5891 TATGGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAG 5950 || || || |||||||| | ||||||||| | || |||||||| || || || ||| Sbjct 314 TAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGGGTAAAAG 255 Query 5951 TGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAG 6010 || |||||||| || || | || | || ||| || || || || |||||||| || Sbjct 254 TGCAACCCAATAGCTGCAGAAGTAGGGATAATGGCACCAGAWATAATATTGTTTCCGTAA 195 Query 6011 AGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACG 6070 ||||||||||| | || |||||||| || || || || || ||||| || ||||| | | Sbjct 194 AGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATG 135 Query 6071 AATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAAC 6130 || || | |||||| ||| ||||||||| || | | || ||||| || ||||||||| Sbjct 134 AAGGCAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAAC 75 Query 6131 CACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || || | ||| || ||||| | ||||| || | ||||| |||||| Sbjct 74 CATCCAATATAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 28 >seq8 Length=4047118 Score = 158 bits (174), Expect = 4e-34 Identities = 218/305 (71%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 5828 AGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGT 5887 |||||||| | || |||| |||| ||| | ||||| | |||||| | || | || Sbjct 2332246 AGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAGC 2332187 Query 5888 TGGTATGGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAG 5947 | || || || |||||||| | ||||||||| | || |||||||| || || || Sbjct 2332186 TCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGGGTAA 2332127 Query 5948 AAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCA 6007 ||||| |||||||| || || | || | || ||| || || || || |||||||| Sbjct 2332126 AAGTGCAACCCAATAGCTGCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTTTCCG 2332067 Query 6008 TAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCT 6067 || ||||||||||| | || |||||||| || | || || || ||||| || ||||| Sbjct 2332066 TAAAGTAGAGATCCAGAAACAGGTTCACGAATACTATCAATATCTACTGGAGGAGCAGCA 2332007 Query 6068 ACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCA 6127 | ||| | | |||||| ||| ||||||||| || | | || ||||| || |||||| Sbjct 2332006 ATGAAGACAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCA 2331947 Query 6128 AACCA 6132 ||||| Sbjct 2331946 AACCA 2331942 >seq76 Length=1023076 Score = 150 bits (166), Expect = 5e-32 Identities = 182/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| |||| || || ||||||||||||||||| ||||| ||||| ||||||||| Sbjct 1004556 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 1004497 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 ||||| || |||||||| | | ||| ||||| || || | | ||| | ||| Sbjct 1004496 CCAAGATTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCA 1004437 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || || || || ||||| || || || || | || |||||||||||| || || | | Sbjct 1004436 ACTACAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 1004377 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 | ||| | ||| || | || || ||||||| ||| ||||||||||||||| ||| | Sbjct 1004376 GCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 1004317 Query 5426 TTGTTAAA 5433 ||||| || Sbjct 1004316 TTGTTGAA 1004309 >seq55 Length=1179671 Score = 149 bits (164), Expect = 2e-31 Identities = 227/323 (70%), Gaps = 9/323 (3%) Strand=Plus/Minus Query 5196 CTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGG 5255 |||| || || ||||||||||||||| | ||||| ||||| |||| ||||||||| || | Sbjct 344380 CTAGGTCTAGAGGGAAGTTGTGAGCACTACGTTCATGCATAACTTTCATACCAAGATTAG 344321 Query 5256 CACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACT 5315 ||||||| | | ||| |||||||| || | | ||| | ||||| || || | Sbjct 344320 CACGGTTAATAATATCAGCCCAAGTATTAATTACACAACCTTGACTATCAACTACAGATT 344261 Query 5316 GATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCC 5375 | ||||| || || || || | || |||| |||| || | | | || | || Sbjct 344260 GGTTGAAATTGAAACCATTTAAGTTGAAAGTCATAATG-----CGCGGTGAACGTGAACC 344206 Query 5376 ATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGC 5435 | || | || | ||||||| ||| | ||||||||||||| | | |||||| || | Sbjct 344205 AGATACCTACTGCAGGCCAAGCAGCTAAGAAGAAATGTAAAGAAAGAGAATTGTTGAAAC 344146 Query 5436 TAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTT 5495 ||||||| |||||||| | | ||||| || ||||||| || || ||||| |||| Sbjct 344145 TAGCATATTGGAAGATAAATTGGCCAAAATAACCATGAG----TACGATATTATAAGTTT 344090 Query 5496 CTTCCTCTTGGCCGAATTTATAT 5518 ||||||| || ||||| | ||| Sbjct 344089 CTTCCTCGTGCTCGAATCTTTAT 344067 >seq96 Length=850568 Score = 131 bits (144), Expect = 5e-26 Identities = 186/259 (72%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 5707 AGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGG 5765 ||||||||| ||| || ||||| || || | ||||| | || || || | ||||| Sbjct 64587 AGGCATACCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAG- 64645 Query 5766 CTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAAC 5825 | || ||||| || ||||||||||| || |||||| || ||||| || | | | ||| Sbjct 64646 CAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAAC 64705 Query 5826 TAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGA 5885 |||||||||| | || |||| |||| ||| | ||||| | |||||| | || | | Sbjct 64706 TAAGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTA 64765 Query 5886 GTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGAT 5945 | | || || || |||||||| | ||||||||| | || |||||||| || || | Sbjct 64766 GCTCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGGGT 64825 Query 5946 AGAAGTGTAACCCAATTGC 5964 | ||||| |||||||| || Sbjct 64826 AAAAGTGCAACCCAATAGC 64844 >seq299 Length=193022 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| | || ||| | | ||||| || || ||||||| ||| ||||| || | | Sbjct 156043 CCGAATACACTGGCTACATCTAATATGTGAAATGGGTGCATAATGATGTTGTGCTCAGTC 156102 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 | |||||| | ||| ||||| |||| | |||| | || ||||||||||| | | || Sbjct 156103 TAGAATACAATCATGAAGTTGAAAGCATGAGAGGTTCCTAGAGGCATACCGTGAAAAAAG 156162 Query 5726 CTTCCCTGTCCGAAAGGGTA 5745 ||||| || || | ||||| Sbjct 156163 CTTCCTTGACCAATTGGGTA 156182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152647693024872