Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 100 5e-16 >seq6 Length=5093711 Score = 100 bits (110), Expect = 5e-16 Identities = 371/569 (65%), Gaps = 13/569 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||||| ||||||||||| || ||| ||||||||| || ||| | || || Sbjct 4851683 ATATGGGAAATGTACAAGAAAGCCATGGCCTCGTTCTGGACCGCTGAGGAGGTCGACCTC 4851742 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | ||||| | | ||| | | || | ||||| ||||||| || || Sbjct 4851743 TCACAGGACCTCCGCCATTGGGAAGGCCTCACGGCCGACGAAAAGCATTTCATCTCCCAC 4851802 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || |||| ||||| || ||||| |||||||| || |||||||| || | ||| Sbjct 4851803 GTTCTGGCCTTCTTCGCCGCCTCCGATGGTATCGTTCTGGAGAATCTCGCCGGCCGGTTC 4851862 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCA-AGTGTTTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| | |||||| | || | ||||| || ||||| || || || || Sbjct 4851863 ATGAAGGAGGTTCAGGTTGCGGAGGCTAGAGCG-TTCTATGGCTTCCAAATCGCAATTGA 4851921 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| ||| |||| | | || || ||||| | ||| | ||| Sbjct 4851922 GAACATTCACTCCGAGATGTACAGTTTGTTGCTCGAAACCTACATCAAGGACTCAGTCGA 4851981 Query 25776 GAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGT 25834 || ||| | || |||| ||||||||| |||| || || || ||| || || Sbjct 4851982 GA-AGAACAGGTTGTTCCACGCCATCGAGACTGTACCTTGCGTCGCGAAGAAAGCCGAGT 4852040 Query 25835 GGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||| | || |||||| || || | ||| |||||| ||||| ||| | | ||| Sbjct 4852041 GGGCGCTAAAATGGATCGACGGCTCCGAG----TCGTTTGCAGAGCGTCTGATTGGCTTC 4852096 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG-GCCATCTTCTGGCTCAAGCA 25952 || |||||| || || || ||| ||| |||| | ||||| |||||||| ||| | Sbjct 4852097 GCATGTGTGGAAGGTATTTTCTTC-TCGGGAAGTTTCTGCGCCATATTCTGGCTGAAG-A 4852154 Query 25953 GAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | | || | ||||| || || || || ||||| | ||| | | ||||| || | Sbjct 4852155 AACGAGGCCTTATGCCAGGATTGACATTCTCAAACGAATTGATCTCCCGAGACGAAGGCC 4852214 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 | ||| | ||||| || ||| |||| ||| Sbjct 4852215 TGCACTGCGATTTCGCGTGCTTGCTGTAC 4852243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928832585690880