Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 1e-30
seq124 129 4e-24
seq29 129 4e-24
seq14 109 4e-18
seq2 98.7 6e-15
seq34 95.1 8e-14
seq15 95.1 8e-14
seq7 95.1 8e-14
seq56 91.5 1e-12
seq117 87.8 1e-11
>seq6
Length=5093711
Score = 150 bits (166), Expect = 1e-30
Identities = 549/844 (65%), Gaps = 18/844 (2%)
Strand=Plus/Plus
Query 475338 TCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAG 475397
|||| || ||| |||| || | ||||| || || || | |||||||||||||| |
Sbjct 1863304 TCGAGGAAGGTATTTTTGAGGTGAAGGCAACGGCAGGTGACACCCATCTTGGTGGTGAGG 1863363
Query 475398 ATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGT 475455
|||||||||| ||| | || |||| ||| | | |||| ||||| || || ||
Sbjct 1863364 ATTTTGATAACAGATTGGTTAATCACTTCGTGCAGGA-ATTT-AAGAGAAAGAACAAGAA 1863421
Query 475456 TGATCTT--TCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCT 475513
|| || | ||| | | || | || | | |||||| ||||||| | ||
Sbjct 1863422 AGACATTAGTGGGAATC--CCAGGGCTCTTAGGAGATTGAGAACTTCTTGTGAGAGGGCG 1863479
Query 475514 AAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGA 475573
||| | |||| ||||| | |||||||||| | || |||||||||| | || |||
Sbjct 1863480 AAGAGGACTCTCTCTTCCACAGCTCAAACTACAATAGAGATTGATTCTCTGTACGAGGGA 1863539
Query 475574 ATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTT 475633
|| || | || | ||||| | |||| |||||| || | || || ||
Sbjct 1863540 ATCGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAACATGGACCTTTTC 1863599
Query 475634 AGAAAAACAATTGAACCCGTTGAACAAGTTCTC-AGAGATTCTAAACTTGACAA-ATCAC 475691
|| || || ||||||||||| |||| || |||||| |||| | ||||| | ||
Sbjct 1863600 AGGAAGTGTATGGAACCCGTTGAG-AAGTGCTTGAGAGATGCTAAGATGGACAAGAGCAG 1863658
Query 475692 AAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGC 475751
| || |||| | |||||||| || || || || || ||||| || | || | |
Sbjct 1863659 TATTC-ATGACGTGGTTCTTGTTGGTGGCTCTACTAGGATTCCCAAGGTGC-AGCAGTTG 1863716
Query 475752 TTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTG 475808
|| || || | || ||||| ||| || | || ||| ||| || |||||||||||||
Sbjct 1863717 TTGCAGGATTTCTTCAATGGCAAAGAGCTT--TGCAAGAGTATCAACCCTGATGAAGCTG 1863774
Query 475809 TTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAA 475868
| || || |||||||| ||||| || || ||| | || | ||||||| |
Sbjct 1863775 TGGCCTACGGAGCTGCAGTCCAGGCCGCCATTCTGAGCGGCGAGGGCAACGAGAAGGTTC 1863834
Query 475869 ATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGA 475928
| || | | ||| | || || || || || || | || || ||||| | ||| ||
Sbjct 1863835 AGGATCTGTTGCTTCTGGATGTCACCCCTCTGTCCCTTGGACTGGAAACGGCTGGTGGTG 1863894
Query 475929 TTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTT 475988
| |||||| || ||| || || || | ||||| ||| || | |||| || |
Sbjct 1863895 TGATGACTGTCCTAATTCCAAGGAACACCACCATCCCCACCAAGAAGGAACAAGTTTTCT 1863954
Query 475989 CCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAAT 476048
| || || || || || ||| | || |||||| ||| |||||| || || |
Sbjct 1863955 CTACCTACTCCGACAACCAACCCGGAGTTTTGATCCAAGTCTATGAAGGAGAGAGGGCAA 1864014
Query 476049 TCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCA 476108
|| || || ||| || |||| ||| | || || || ||||| || || |
Sbjct 1864015 GAACCCGTGACAACAACTTGCTAGGAAAATTTGAGCTCTCTGGAATCCCTCCGGCCCCTA 1864074
Query 476109 GAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTA 476168
|||| |||||||||||| || || ||||||||||| |||||||| || ||||||
Sbjct 1864075 GAGGTGTTCCTCAAATTACCGTCTGCTTCGATATTGATGCCAATGGTATCCTGAATGTTT 1864134
Query 476169 CTGC 476172
||||
Sbjct 1864135 CTGC 1864138
Score = 145 bits (160), Expect = 5e-29
Identities = 529/817 (65%), Gaps = 16/817 (2%)
Strand=Plus/Plus
Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421
||||| || || || | |||||||| ||||| || || || || ||| | || | ||
Sbjct 1919836 GCAACGGCCGGTGACACTCATCTTGGAGGTGAGGACTTCGACAACAGATTGGTTAACCAC 1919895
Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAA--AGTTGATCTTTCAACATCTGCTAAAGC 475479
| ||| |||| ||||||||||| ||||| || ||| | | | | | | ||
Sbjct 1919896 --TTCGTTCAAGAATTCAAGAGGAAGAATAAGAAGGACATCAGTGGAAACCCG--AGGGC 1919951
Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539
| || | | || ||||||||||| | || ||| | | ||||| || | ||||
Sbjct 1919952 TCTCAGGAGATTGAGGACTGCTTGTGAGAGGGCCAAGAGGACCCTTTCATCCACCGCTCA 1920011
Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAG 475599
|||||| | || |||||||| | | || ||||| |||| | || || || |
Sbjct 1920012 AACTACAATCGAGATTGATTCTTTGTACGAGGGAATCGATTTCTACACAACCATCACTCG 1920071
Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659
|||| ||||| || | || || || || || || || || ||||| |
Sbjct 1920072 TGCTAGGTTTGAGGAGCTCAACATGGACCTGTTCAGGAAGTGTATGGAGCCAGTTGAG-A 1920130
Query 475660 AGT-TCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAG 475718
||| | | |||||| | || | |||||| |||||||| |||| ||||| || |
Sbjct 1920131 AGTGTTTGAGAGATGCAAAGATGGACAAAAGCAGTGTCCATGATGTTGTCCTTGTTGGTG 1920190
Query 475719 GTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAG 475777
| || || || ||||| || | || | || || || | || ||||| || |
Sbjct 1920191 GCTCTACGAGGATTCCTAAGGTGC-AGCAGCTATTGCAGGATTTCTTCAATGGCAAGGAA 1920249
Query 475778 TTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835
| || ||| ||| ||||||||||| || ||||| || || ||||| || ||||| |
Sbjct 1920250 CTG--TGCAAGAGTATCAATCCTGATGAGGCAGTTGCTTACGGGGCTGCAGTTCAAGCTG 1920307
Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895
| || || | ||| || | | |||||| | | || || | ||| | || || ||||
Sbjct 1920308 CCATATTGTGTGGTGAAGGAAATGAGAAAGTTCAGGATCTTCTGCTTCTGGATGTCACTC 1920367
Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955
| || || | ||| | || || | |||||| | ||||| | | || ||| ||||
Sbjct 1920368 CTCTGTCCCTTGGTTTGGAGACTGCTGGAGGTGTGATGACAGTTTTGATCCCCAGGAATA 1920427
Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015
| | || || ||| || |||| || ||||| || || ||||| ||| | ||
Sbjct 1920428 CCACCATACCCACCAAGAAGGAGCAAGTCTTCTCCACATACTCAGATAACCAACCCGGTG 1920487
Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075
| ||| || ||| ||| |||||||| | || |||||| || | || |
Sbjct 1920488 TTCTCATTCAGGTCTATGAGGGTGAAAGGACGAGAACCCGAGATAACAATTTGTTGGGCA 1920547
Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135
|| | ||| || |||||||| ||||| ||||| ||||| || || | ||| |
Sbjct 1920548 AGTTCGAGCTTTCTGGCATTCCTCCAGCTCCGAGAGGTGTTCCCCAGATCAACGTTTGCT 1920607
Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172
| || |||||||| |||||||| ||||||||| ||||
Sbjct 1920608 TCGACATTGATGCCAATGGTATCCTTAATGTTTCTGC 1920644
Score = 105 bits (116), Expect = 4e-17
Identities = 199/287 (69%), Gaps = 17/287 (6%)
Strand=Plus/Plus
Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705
|| || ||||| ||||| |||| ||||| ||||| | || ||||| | | ||
Sbjct 1862997 AAGCAGTTTTCGGCGGAAGAAATCTCTTCTATGGTGCTCATTAAGATGAAGGAGATTGCT 1863056
Query 474706 GAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764
||| | ||||| || |||| || | |||| || | ||||| ||||| || ||||
Sbjct 1863057 GAGG-CGTATCTGGGCACAACG-GTGAAGAATGCCGTTGTCACTGTCCCAGCCTACTTTA 1863114
Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824
| ||||| || | || || || |||||||| || || |||| || || || | |
Sbjct 1863115 ACGATTCACAGAGACAGGCCACCAAAGATGCTGGTGTCATCTCAGGCCTAAACGTGATGC 1863174
Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACA 474884
|||| || ||||||||||| || ||||| |||||||||||||||| ||||| || ||
Sbjct 1863175 GTATCATCAATGAACCAACTGCTGCCGCCATTGCTTATGGTCTTGACAAGAAGGCTACCA 1863234
Query 474885 --------AAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920
||||| |||||| |||| ||||||| |||| ||||
Sbjct 1863235 GCTCCGGTGAGAAG--AATGTTCTAATTTTTGATTTGGGTGGTGGTA 1863279
>seq124
Length=632428
Score = 129 bits (142), Expect = 4e-24
Identities = 165/221 (75%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAG 480609
||||||||||| || |||||||| || || | |||| | || || ||||| || ||||
Sbjct 447245 CGAAGACGGAGCACTAGATGAAGAGTTGAC-TCCTTTTG-AATGTTGTAATCGGCAAGAG 447302
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | ||||||||| ||||| || || ||||| || | ||| || || ||||| || |
Sbjct 447303 TCCGTCCATCTTCAAGCTGCTTGCCTGCGAAAATTAGCCTTTGCTGGTCTGGAGGGATAC 447362
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCA 480728
||||||||||||||||||| ||||||| ||||| || || | | | | || | ||
Sbjct 447363 CTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATTGTGTCGGAGCTTTCAACCTCCA 447422
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || ||||| || || ||||| || || |||||||||||
Sbjct 447423 A-TGTGATAGTCTTTCCCGTGAGCGTTTTGACGAAAATTTG 447462
Score = 111 bits (122), Expect = 1e-18
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || || |||| | ||||| || ||||||||||| || || || | ||
Sbjct 447743 TTGTAATCGGCCAGGGTTCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATTAGCCTCTGC 447802
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||||||||||||||| ||||| || || ||| ||||||||||||
Sbjct 447803 TGGTCCGGTGGAATTCCTTCCTTGTCCTGAATTTTGGCCTTTACATTGTCAATAGTATCA 447862
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | ||||||||||| ||||| ||||||||||| || || || || ||
Sbjct 447863 GAACTTTCAACCTCAAGGGTAATTGTTTTGCCGGTGAGAGTTTTCACAAATATCTG 447918
>seq29
Length=1578684
Score = 129 bits (142), Expect = 4e-24
Identities = 540/832 (65%), Gaps = 28/832 (3%)
Strand=Plus/Minus
Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399
||||| ||| | ||| || | || || ||||||||| | |||||||||||||| |||
Sbjct 289382 GAAGAGGGTATCTTCGAGGTGAAGGCCACTGCTGGAGATACGCATCTTGGTGGTGAGGAT 289323
Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457
|| || || ||| | || | || |||| | || ||||||||||| | || |
Sbjct 289322 TTCGACAACAGATTGGTGAACCACTTTGTGCAGGAG--TTCAAGAGGAAGCACAAGAAGG 289265
Query 475458 ATCTTT----CAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCT 475513
| || |||| | | ||| | || | || || || ||||||| | |||
Sbjct 289264 ACATTAGTGGCAACC----CAAGAGCTCTTAGGAGGCTGAGGACATCTTGTGAGAGGGCT 289209
Query 475514 AAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGA 475573
||| | |||| || || || |||| || || ||||| ||||||| | | ||||||
Sbjct 289208 AAGAGGACTCTCTCATCCACTGCTCAGACCACCATTGAAATTGATTCCTTGTACGAAGGA 289149
Query 475574 ATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCT-GATCTCT 475631
||||| || || | | ||||| | || | |||||| || ||| | |||||||
Sbjct 289148 ATTGACTTCTACT-CAACCATTACTCGTGCCAGATTTGAGGA-ATTGAACATGGATCTCT 289091
Query 475632 TTAGAAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATC 475689
| || || || || ||||||| | |||| | | || ||| | || | ||||| | |
Sbjct 289090 TCAGGAAGTGTATGGAGCCCGTTG-AGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGC 289032
Query 475690 ACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAAT 475749
|| |||||||| |||| ||||| || || || || || ||||| || | | | |
Sbjct 289031 AC-CGTCCATGATGTTGTCCTTGTCGGTGGCTCTACTAGGATTCCCAAGGTCCAACAGTT 288973
Query 475750 GCTTTCATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTG--TAAATCCTGATGAAGC 475806
| || || || | || ||||| || || | || ||| | | || |||||||||||
Sbjct 288972 G-TTGCAAGATTTCTTCAATGGCAAGGAGCT--TTGCAAGAGCATCAACCCTGATGAAGC 288916
Query 475807 TGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACT 475866
||||| ||||| ||||| || || || || || || ||| | | ||||| |
Sbjct 288915 CGTTGCTTATGGTGCTGCAGTTCAGGCTGCCATCTTGAGTGGTGAGGGCAATGAGAAGGT 288856
Query 475867 AAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGG 475926
| | || | || | || || || || || || | ||| | ||||||| ||| ||
Sbjct 288855 GCAGGACCTTCTTCTGTTGGATGTCACCCCTCTCTCCCTTGGTTTGGAAACAGCTGGTGG 288796
Query 475927 GATTATGACTAATCTT-ATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTAT 475985
| ||||| | | || ||| ||||| || | ||||| ||| || | | ||||
Sbjct 288795 TGTCATGAC-AGTGTTGATTCCGAGAAACACGACCATCCCCACCAAGAAGGAACAGGTAT 288737
Query 475986 TTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAA 476045
| || || || || || || || | ||| || ||| | | |||||||| ||||
Sbjct 288736 TCTCTACCTACTCCGACAACCAGCCTGGTGTGTTGATTCAAGTATACGAAGGTGAGAGAA 288677
Query 476046 AATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTC 476105
|| || || || ||||| | ||| | || || || ||||| ||||
Sbjct 288676 CGAGAACCCGCGACAACAATTTGCTTGGGAAATTTGAGCTCTCTGGCATCCCTCCAGCTC 288617
Query 476106 CCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTAT 476157
||||||| ||||| ||||| ||| ||||| |||||||| ||||||||
Sbjct 288616 CCAGAGGTGTTCCCCAAATCACAGTGTGCTTTGACATTGATGCCAATGGTAT 288565
Score = 89.7 bits (98), Expect = 3e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || |||| || || || || || ||||| ||||||||||| || || || ||||
Sbjct 289603 ATGCTGTGGTTACCGTCCCTGCGTACTTCAATGACTCTCAACGTCAGGCCACCAAGGATG 289544
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||||| ||||| ||||| | | || || ||||| || || || || ||
Sbjct 289543 CTGGTGTCATTGCTGGTCTCAATGTCATGAGAATCATCAATGAGCCCACGGCCGCTGCCA 289484
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||| ||||||||||| |||||
Sbjct 289483 TTGCATATGGTCTTGACAAGAA 289462
>seq14
Length=2855554
Score = 109 bits (120), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||| | || || |||||||| ||| ||| || | ||| ||||| || || |||
Sbjct 998652 CGAAGTCTAAGCACCAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCGGCAAGGGTT 998593
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| ||| || |||||||| ||||| || ||||| | ||| || || |||||||||||
Sbjct 998592 CGACCATCCTCGAGTTGCTTACCAGCGAAGATAAGCCTTTGCTGGTCGGGAGGAATTCCC 998533
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731
|| || ||||| |||||| || ||| ||||| ||||| | | || |||
Sbjct 998532 TCTTTATCTTGGATCTTTGCCTTTACATTGTCAATGGTATCCGAACTTTCCACCTCGAGG 998473
Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| || |||||||| || ||||| |||||
Sbjct 998472 GTGATTGTTTTGCCAGTGAGAGTTTTCACGAAGATTTG 998435
Score = 102 bits (112), Expect = 5e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| || || || | ||| | ||| |||||| | ||| || ||||| |||||
Sbjct 998881 ACGAAGCCGAAGCACCAAATGCAAAGTAGATTCTTTCTGGATATTGTAGTCAGCAAGAGT 998822
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | || ||||| ||||| ||||||||||| || | |||||||||||||| || ||
Sbjct 998821 ACGGCCGTCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGTTGATCAGGAGGGATACC 998762
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||| ||||| || || || ||| ||||| ||||||| | |||||
Sbjct 998761 CTCCTTATCTTGGATTTTAGCCTTCACATTGTCAATCGTATCAGAACTTTCCACCTCAAG 998702
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| || || || ||||| || || |||||
Sbjct 998701 CGTGATGGTTTTGCCAGTAAGGGTCTTCACAAATATTTG 998663
Score = 96.9 bits (106), Expect = 2e-14
Identities = 129/177 (73%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || ||||| || |||||| |||||||| |||||||| || || | |||
Sbjct 999294 TTGTAATCTGCCAGAGTCCTACCATCTTCTAGTTGCTTACCAGCAAAGATCAGCCTCTGT 999235
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||| || || || ||||||||||| ||||| ||| ||| ||||| ||||||
Sbjct 999234 TGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTGTCAATGGTATCA 999175
Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | | || ||| || || || || || || | ||||| || ||||| ||
Sbjct 999174 GAGCTCTCCACTTCCAA-AGTGATCGTCTTGCCTGTCAAGGTCTTCACAAAAATCTG 999119
>seq2
Length=6783546
Score = 98.7 bits (108), Expect = 6e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391
|| || |||||| | || || || ||||| || || || || |||||||| | | |||
Sbjct 2802530 ATCGGCATTGATCTCGGCACCACCTACAGCTGCGTCGCCGTCTGGCAAAACGATCGTGTA 2802589
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
|| || ||||||||||| ||||| || ||||| || || || || || |||| || ||
Sbjct 2802590 GAGATTATTGCCAATGATCAAGGCAACAGAACCACTCCCTCCTACGTCGCTTTCACCGAT 2802649
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
|| |||| || || || ||||| || || |||| | || ||||| ||||||
Sbjct 2802650 ACCGAACGACTGATCGGCGATGCGGCCAAGAATCAGGTCGCGATGAATCCGCAGAATACT 2802709
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCG 474540
|||| || || || || | ||||| ||
Sbjct 2802710 GTTTTCGACGCCAAGAGGCTCATTGGCCG 2802738
>seq34
Length=1513885
Score = 95.1 bits (104), Expect = 8e-14
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159
||||| || || |||||||| ||||| ||||||||| |||| ||||| |||||||| ||
Sbjct 1307826 GATTTCTCCTCGCCAAATATAGCAAAAGAAATGCATGTTGGCCACTTAAGATCTACGATC 1307885
Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGT-GAAGTACAAAGAATAAA 817218
||||| || |||| |||| |||||||| |||| || || | ||| ||
Sbjct 1307886 ATTGGAGACACTCTAGCCCGAATGCTTGAATTTTCAC-ATGTTGATGTTCTTCGAAGGAA 1307944
Query 817219 TCATATTGGTGATTGGGGAACACA 817242
||| |||||||||||||||||||
Sbjct 1307945 CCATGTTGGTGATTGGGGAACACA 1307968
>seq15
Length=2492501
Score = 95.1 bits (104), Expect = 8e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|| ||||| || ||||| ||||| || || || | || |||||||| |||||
Sbjct 255618 CGGAGACGAAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGCCAGAGTC 255677
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
|| ||| || || |||||||||||||| || | | || || || |||||||||||
Sbjct 255678 CTCCCATCCTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATTCCC 255737
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730
|||||||| |||||||| || || ||||| ||||| | | | | | | |||
Sbjct 255738 TCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATCGTATCTGAGCTCTCCACCTCCAA- 255796
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || ||||| || ||||| ||||| || ||
Sbjct 255797 GGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTG 255835
>seq7
Length=5085854
Score = 95.1 bits (104), Expect = 8e-14
Identities = 230/344 (67%), Gaps = 6/344 (2%)
Strand=Plus/Plus
Query 475490 CTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTT 475549
|| || || || || || | || || |||| || || || | || || || || ||
Sbjct 4129008 CTGAGGACCGCCTGCGAGAGAGCAAAAAGAGCGCTCTCATCGACCACGCAGACGACGATT 4129067
Query 475550 GAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTT 475609
|||||||||||||||| ||||||||||| | || | || || ||||||| |||
Sbjct 4129068 GAAGTTGATTCTCTTTACGAAGGAATTGACTTCTATGCGACGATAACGAGGGCTAGATTC 4129127
Query 475610 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGA 475669
|| || | ||| ||| | || | || || ||||| ||||| || || |
Sbjct 4129128 GAGGAATTGTGTATGGATATGTTCATGAAGTGTATGGAACCAGTTGAGAAATGCATCCGT 4129187
Query 475670 GATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGA 475729
||| ||||| | || ||| ||||| ||||| | ||| | || || || || ||||||
Sbjct 4129188 GATGCTAAAATCGATAAAATCCAAGTTCATGAGGTCGTTTTGGTCGGTGGATCGACAAGA 4129247
Query 475730 ATTCCAAAAATAAGAGAAATGCTTT--CATCA-TATTTTAATGGTAAAAAGTTAAATGAA 475786
||||| ||| | || | ||||| || | || || || || || || | | ||
Sbjct 4129248 ATTCCGAAAGT-TCAGCA--GCTTTTGCAGGATTACTTCAACGGGAAGGAGCTCTGTAAA 4129304
Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCA 475830
|| | || || ||||| |||||||| || || |||||||| ||
Sbjct 4129305 AGCATTAACCCCGATGAGGCTGTTGCTTACGGTGCTGCTGTTCA 4129348
>seq56
Length=1171948
Score = 91.5 bits (100), Expect = 1e-12
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || ||||||||||| || ||||| |||||| | || | |||||||| || || ||
Sbjct 1048001 GCTGTGATTACTGTTCCGGCTTATTTCAATGATGCACAGAGACAAGCAACAAAGGACGCT 1047942
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| || ||||| ||| | ||||| | | ||||| || ||||| || || || ||||||
Sbjct 1047941 GGCAGGATTGCTGGTTTGGATGTTCTTAGAATTATCAACGAACCCACTGCTGCTGCACTT 1047882
Query 474857 GCTTATGG 474864
|||||||
Sbjct 1047881 TCTTATGG 1047874
Score = 86.0 bits (94), Expect = 4e-11
Identities = 87/113 (77%), Gaps = 3/113 (3%)
Strand=Plus/Minus
Query 476063 AACAAACTT---GGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCT 476119
||||||||| ||| ||| | || | || ||||| |||||||| |||||| | |||
Sbjct 1046656 AACAAACTTCTAGGAGAGTTTGAGCTAGTTGGAATTCCCCCTGCTCCAAGAGGAATGCCT 1046597
Query 476120 CAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172
|||||||| || || ||||| |||||||| || |||||| ||| ||| ||||
Sbjct 1046596 CAAATTGAGGTGACATTTGACATTGATGCCAACGGTATTGTTACTGTCTCTGC 1046544
>seq117
Length=705152
Score = 87.8 bits (96), Expect = 1e-11
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785
||||||| | || || | || || || || || || |||||||||||| | || |
Sbjct 686858 AAGTAACAAAGGCTGTCGTGACCGTGCCTGCCTACTTCAATGATTCTCAAAGAACGGCCA 686917
Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845
| || ||||| || | ||||| ||||| | ||||| |||||||| |||||||| || |
Sbjct 686918 CAAAGGATGCTGGTCGTATTGCTGGTCTCGAAGTTTTGCGTATTATCAATGAACCCACTG 686977
Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
| || || | |||||||| |||| |||||
Sbjct 686978 CTGCTTCATTAGCTTATGGATTTGAAAAGAA 687008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268134074615696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |