Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_020865.1
Length=45730
Score E
Sequences producing significant alignments: (Bits) Value
seq609 448 1e-121
seq424 394 3e-105
seq55 172 2e-38
seq76 161 3e-35
seq96 145 2e-30
seq850 125 2e-24
seq15 111 5e-20
seq8 111 5e-20
seq214 89.7 2e-13
>seq609
Length=9483
Score = 448 bits (496), Expect = 1e-121
Identities = 550/753 (73%), Gaps = 0/753 (0%)
Strand=Plus/Plus
Query 41459 CACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCA 41518
||||| ||| | || |||||||||||| | ||||||||||| | ||||| || |||||
Sbjct 4396 CACTTTTACMCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCT 4455
Query 41519 TTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGG 41578
| | || | || | |||||| | |||| || ||||||||| |||||||||
Sbjct 4456 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGG 4515
Query 41579 GAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTC 41638
|||||||| | || || || ||| || ||||| |||||| || || ||||||||
Sbjct 4516 GAACTTAGTTTCCGTCTGGGTATGCKTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 4575
Query 41639 GCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCT 41698
|| ||||| |||||||| ||| | | || || |||| || || |||||||| | |
Sbjct 4576 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGT 4635
Query 41699 ATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAAT 41758
||||| | || || || || || ||||||| |||| | || |||||||||||||||||
Sbjct 4636 ATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAAC 4695
Query 41759 ATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTC 41818
|| |||||||| || ||||||||| | ||||| | || ||||| || || | |||
Sbjct 4696 ATCCTTATGCACCCATTTCACATGTTAGGTGTAGTTGGTGTATTCGGCGGCTCCCTATTC 4755
Query 41819 TCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTT 41878
||||||||| ||| | |||| || || | || | || || || ||| | |
Sbjct 4756 AGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAA 4815
Query 41879 TCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCT 41938
|| || | ||||||| || || ||||||||||| ||||| ||||| || ||||||
Sbjct 4816 TCTGCTAATGAAGGTTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCT 4875
Query 41939 CACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTT 41998
|| || |||||||| || | ||||||||||||||||| || || ||||| ||| | |
Sbjct 4876 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTA 4935
Query 41999 CATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCT 42058
|||||||| || ||||| |||||||| |||||||| ||||| | || | || |
Sbjct 4936 CATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGC 4995
Query 42059 ACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGA 42118
|| |||||||||||||| ||||||||||| || ||||||||| | | | | | ||
Sbjct 4996 ACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTSATAGTCAAGGT 5055
Query 42119 CAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATG 42178
| || || || ||||||||||| ||| |||||||||| || ||||| | || || |||
Sbjct 5056 CGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATG 5115
Query 42179 CATGAGCGGAACGCACACAACTTCCCGCTTGAC 42211
||||| || || || ||||||||||| || |||
Sbjct 5116 CATGAACGTAATGCTCACAACTTCCCTCTAGAC 5148
>seq424
Length=105662
Score = 394 bits (436), Expect = 3e-105
Identities = 569/807 (71%), Gaps = 2/807 (0%)
Strand=Plus/Plus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|| ||| |||| | ||| ||||| ||||||||||| | |||||||| || || |
Sbjct 94874 TTCTGTAACTGGATAACCAGCACTAAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTR 94933
Query 41294 ATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352
||||| || | ||| ||| | || || || |||||||| |||| ||| || ||
Sbjct 94934 ATGATCCC-TACCTTATTGACYGCAACTTCTGTATTTATTATTRCCTTCATTGCTGCTCC 94992
Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412
|| | || || ||||| || | ||||| || |||| || || | || || |||||
Sbjct 94993 TCCAATAGATATTGATGGTATTAGTGAACCTGTTTCTGGATCTCTAYTTTACGGAAACAA 95052
Query 41413 CATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAAT 41472
|| || || || ||| | | || | | || || || | ||||| ||| | ||
Sbjct 95053 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACYCGAT 95112
Query 41473 TTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGT 41532
|||||||||||| | ||||||||||| | ||||| || ||||| | | || | ||
Sbjct 95113 ATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 95172
Query 41533 ATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCG 41592
| |||||| | |||| || ||||||||| |||||||||||||||| | ||
Sbjct 95173 TCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTAGAGAGTGGGAACTTAGTTTCCG 95232
Query 41593 ACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGC 41652
|| || ||| | || ||||| |||||| || || |||||||| || ||||| ||| |
Sbjct 95233 TCTGGGTATGYGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTRC 95292
Query 41653 TGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGAT 41712
||| ||| | | || || |||| | || |||| ||| | |||||| | || ||
Sbjct 95293 TGTTTTCTTRATMTACCCAATTGGTMAAGGAAGCTTTTMTGACGGTATGCCTCTAGGAAT 95352
Query 41713 ATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCC 41772
|| || || ||||||| |||| | || |||||| |||||||||| || |||||||| ||
Sbjct 95353 CTCTGGTACTTTCAACTTCATGATTGTATTCCAGACTGAGCACAACATCCTTATGCACCC 95412
Query 41773 TTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGG 41832
||||||||| | | ||| || || ||||| || | | ||| ||||||||| ||
Sbjct 95413 ATTTCACATGTTAGSTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 95472
Query 41833 TAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGG 41892
| | |||| || || | || | || || || ||| | | || || | ||
Sbjct 95473 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 95532
Query 41893 TTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGG 41952
||||| || || ||||||||||| ||||| ||||| || |||||||| || ||||||||
Sbjct 95533 TTACATATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 95592
Query 41953 TCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGC 42012
|| ||||||||||||||||||| || || ||||| ||| | | |||||||| |||||
Sbjct 95593 CCGATTTATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTTGC 95652
Query 42013 TGCCTGGCCTGTTGTAGGTATTTGGTT 42039
||| |||||||| |||||||| |||||
Sbjct 95653 TGCTTGGCCTGTAGTAGGTATCTGGTT 95679
Score = 342 bits (378), Expect = 1e-89
Identities = 537/774 (69%), Gaps = 2/774 (0%)
Strand=Plus/Minus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|| ||| |||| | ||| ||| | ||| |||||| | |||||||| || || |
Sbjct 27445 TTCTGTAACTGGATAACCAGCACTGAAAACYRTCTTTAYATTGGATGGTTTGGTGTTTTG 27386
Query 41294 ATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352
||||| || | ||| ||| | || || || |||||||| ||||| ||| || ||
Sbjct 27385 ATGATCCC-TACCTTATTGACYGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCC 27327
Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412
|| || | || ||||| || | ||||| || ||| || || | || || |||||
Sbjct 27326 TCCAGTAGRTATTGATGGTATTMGTGAACCTGTTTMTGGATCTCTAYTTTACGGAAACAA 27267
Query 41413 CATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAAT 41472
|| || || || ||| | | || | | || || || | ||||| ||||| ||
Sbjct 27266 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACCCGAT 27207
Query 41473 TTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGT 41532
|||||||||||| ||||||||||| | ||||| || ||||| | | || | ||
Sbjct 27206 ATGGGAAGCTGCTTYCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 27147
Query 41533 ATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCG 41592
| ||| || | |||| || ||||||||| ||||||||||||||||| | ||
Sbjct 27146 TCTACACWTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCG 27087
Query 41593 ACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGC 41652
|| || ||| | || ||||| |||||| || || |||||||| || ||||| |||||
Sbjct 27086 TCTGGGTATGTGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 27027
Query 41653 TGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGAT 41712
||| ||| | | || || |||| | || |||||||| | |||||| | || ||
Sbjct 27026 TGTTTTCTTGATCTACCCAATTGGTAAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 26967
Query 41713 ATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCC 41772
|| || || ||||||| |||| | |||||||||||||||||||| || |||||||| ||
Sbjct 26966 CTCTGGTACTTTCAACTTCATGATTGTGTTCCAGGCTGAGCACAACATCCTTATGCACCC 26907
Query 41773 TTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGG 41832
||||||||| | ||||| || || ||||| || | | ||| ||||||||| ||
Sbjct 26906 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGG 26847
Query 41833 TAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGG 41892
| | |||| || || | || || || | ||| | | || || | |
Sbjct 26846 TTCCTTGGTAACTTCTAGTTTGATCAAGGAAACCATAGAAAATGAATCTGCTAATGAAGT 26787
Query 41893 TTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGG 41952
||||| || || ||||||||||| ||||| ||||| || |||||| | || ||||||||
Sbjct 26786 TTACAGATTCGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTATGGTTATTTTGG 26727
Query 41953 TCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTT 42006
|| | ||||||||||||||||| || || ||||| ||| | | ||||||||
Sbjct 26726 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTT 26673
>seq55
Length=1179671
Score = 172 bits (190), Expect = 2e-38
Identities = 224/308 (73%), Gaps = 9/308 (3%)
Strand=Plus/Plus
Query 41906 CAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTC 41965
|| |||||||| ||||| ||||| || |||| || |||||||| | ||||||||
Sbjct 344080 CACGAGGAAGAAACTTATAATATCGTA----CTCATGGTTATTTTGGCCAATTTATCTTC 344135
Query 41966 CAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTT 42025
||||||||||| || || ||||| | | | | |||||||| | ||||| |||||||
Sbjct 344136 CAATATGCTAGTTTCAACAATTCTCTTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGCA 344195
Query 42026 GTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTC 42085
|||||||| ||||| | | | || | | ||| |||||||||| |||||||||
Sbjct 344196 GTAGGTATCTGGTTCAC---GTTCACCGCGCATT--ATGACTTTCAACTTAAATGGTTTC 344250
Query 42086 AACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATT 42145
|| || ||||||||| | | | | | | || || || || || |||||||| |||
Sbjct 344251 AATTTCAACCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTAATACTTGGGCTGATATT 344310
Query 42146 CTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCG 42205
|||||||||| || ||||| | | || |||||||| || | || |||||||||||
Sbjct 344311 ATTAACCGTGCTAATCTTGGTATGAAAGTTATGCATGAACGTAGTGCTCACAACTTCCCT 344370
Query 42206 CTTGACCT 42213
|| |||||
Sbjct 344371 CTAGACCT 344378
>seq76
Length=1023076
Score = 161 bits (178), Expect = 3e-35
Identities = 176/234 (75%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 41978 TTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGG 42037
|| || ||||| ||| | | |||||||| || ||||| |||||||| |||||||| |||
Sbjct 1004309 TTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 1004368
Query 42038 TTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAA 42097
|| | || | || | || |||||||||||||| ||||||||||| || ||||||
Sbjct 1004369 TTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAA 1004428
Query 42098 TCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCC 42157
||| | | | | | | || | || || || ||||||||||| ||| ||||||||||
Sbjct 1004429 TCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCT 1004488
Query 42158 AACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGAC 42211
|| ||||| | || || |||||||| || || || ||||||||||| || |||
Sbjct 1004489 AATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGAC 1004542
>seq96
Length=850568
Score = 145 bits (160), Expect = 2e-30
Identities = 179/245 (73%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 41459 CACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCA 41518
||||| ||||| || |||||||||||| | ||||||||||| | ||||| || |||||
Sbjct 64832 CACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCT 64773
Query 41519 TTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGG 41578
| | || | || | |||||| | |||| || ||||||||| |||||||||
Sbjct 64772 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGG 64713
Query 41579 GAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTC 41638
|||||||| | || || || ||| | || ||||| |||||| || || ||||||||
Sbjct 64712 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 64653
Query 41639 GCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCT 41698
|| ||||| |||||||| ||| | | || || |||| || || |||||||| | |
Sbjct 64652 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGT 64593
Query 41699 ATGCC 41703
|||||
Sbjct 64592 ATGCC 64588
>seq850
Length=2209
Score = 125 bits (138), Expect = 2e-24
Identities = 200/285 (70%), Gaps = 2/285 (1%)
Strand=Plus/Plus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|| ||| |||| | ||| ||| | |||||||||||| | |||||||| || || |
Sbjct 28 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTG 87
Query 41294 ATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352
|||| ||| | ||| ||| |||| || || |||||||| ||||| ||| || ||
Sbjct 88 ATGA-TCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCC 146
Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412
|| || || || ||||| || || ||||| || |||| || || | || || |||||
Sbjct 147 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 206
Query 41413 CATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAAT 41472
|| || || || ||| | | || | | || || || | ||||| ||||| ||
Sbjct 207 TATTATWTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGGTTGCACTTTTACCCGAT 266
Query 41473 TTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCC 41517
|||||||||||| | ||||||||||| | ||||| || |||||
Sbjct 267 ATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCC 311
>seq15
Length=2492501
Score = 111 bits (122), Expect = 5e-20
Identities = 140/194 (72%), Gaps = 10/194 (5%)
Strand=Plus/Minus
Query 41907 AAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCC 41966
|||||||||| ||||| ||||| | ||| |||| || |||||| |||| | || |||
Sbjct 1380065 AAGAGGAAGAAACTTATAATATCATCGCTACTCATGGTTATTTTAGTCGATTCATTTTCT 1380006
Query 41967 AATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTG 42026
|||||||||| || ||| |||| | | | | ||||| || | || | | ||||| |
Sbjct 1380005 AATATGCTAGTTTCAATCATTCTCATTCTTTACATTTATTCCAACCTACTTAGCCTGCAG 1379946
Query 42027 TAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCA 42086
|||||||||| ||| ||| | || |||||||||||||| |||| |||||
Sbjct 1379945 TAGGTATTTGATTTATTGC----------TTTATTATGGCTTTCAACTTAAATGATTTCA 1379896
Query 42087 ACTTTAACCAATCT 42100
| || || ||||||
Sbjct 1379895 ATTTCAATCAATCT 1379882
>seq8
Length=4047118
Score = 111 bits (122), Expect = 5e-20
Identities = 211/308 (69%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 41277 GATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATC 41335
||||||| || || | ||||| || | ||| ||| |||| || || ||||||||
Sbjct 2331940 GATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATT 2331998
Query 41336 GCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCC 41395
| ||| ||| || || || || || || ||| | || || ||||| || |||| ||
Sbjct 2331999 GTCTTCATTGCTGCTCCTCCAGTAGATATTGATAGTATTCGTGAACCTGTTTCTGGATCT 2332058
Query 41396 CTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGA 41455
|| | || || ||||| || || || || ||| | | || | | || || ||
Sbjct 2332059 CTACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATTGGG 2332118
Query 41456 CTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGT 41515
| ||||| ||||| || |||||||||||| | ||||||||||| | ||||| || |||
Sbjct 2332119 TTGCACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGT 2332178
Query 41516 CCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAG 41575
|| | | || | || | |||||| | |||| || ||||||||| ||||||
Sbjct 2332179 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAG 2332238
Query 41576 TGGGAACT 41583
||||||||
Sbjct 2332239 TGGGAACT 2332246
>seq214
Length=334764
Score = 89.7 bits (98), Expect = 2e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 42059 ACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGA 42118
|| |||||||||||||| ||||||||||| || ||||||||| | | | | | | ||
Sbjct 71660 ACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 71601
Query 42119 CAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGG 42165
| || || || ||||||||||| ||| |||||||||| || |||||
Sbjct 71600 CGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGG 71554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146212573416608
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