Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq609 407 4e-109 seq424 360 5e-95 seq76 154 4e-33 seq850 147 6e-31 seq8 131 5e-26 seq55 127 6e-25 seq96 111 5e-20 seq84 84.2 6e-12 seq23 80.6 8e-11 >seq609 Length=9483 Score = 407 bits (450), Expect = 4e-109 Identities = 594/842 (71%), Gaps = 0/842 (0%) Strand=Plus/Minus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||||||||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct 5162 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 5103 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || ||| | | ||||| || ||||||||| ||| ||| || ||| | | | Sbjct 5102 CCAAGATTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATSA 5043 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 ||||| || ||||| || || |||||||| | ||| ||||||||||| ||||| | Sbjct 5042 ACTACAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 4983 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||| | ||| || || | || || ||||| | || ||||| |||| | ||| | Sbjct 4982 GCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 4923 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| ||||||||| || || | || ||||| ||||| || ||||||||||| Sbjct 4922 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATA 4863 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 |||||||| || | || || || || | || || | || |||||| |||| ||| Sbjct 4862 TTATAAGTTTCTTCCTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 4803 Query 40884 GTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCA 40943 || |||| || | ||||| || | | || ||||||||| || | | || Sbjct 4802 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 4743 Query 40944 CCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCT 41003 || || || || | || || | ||| || ||||||||||| || |||||||| || || Sbjct 4742 CCGAATACACCAACTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 4683 Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| |||| |||||||||||| || ||| |||||||| ||||||||| ||||| || Sbjct 4682 TGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAG 4623 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTG 41123 || ||||| | ||| || | ||||| ||||| ||| |||| | ||||||| Sbjct 4622 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 4563 Query 41124 TATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCA 41183 ||||| ||| ||||| || |||||| || | | | ||||||||||| || ||| Sbjct 4562 TATGCAACAGCAATCCAAGGAMGCATACCCAGACGGAAACTAAGTTCCCACTCTCGACCC 4503 Query 41184 GCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTG 41243 ||| |||||| || | ||| ||||| | ||||| || | ||| || || || ||| Sbjct 4502 ATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 4443 Query 41244 TATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 |||| ||| || || | | | |||||||| || | ||| || || | || || || Sbjct 4442 TATAACCATTCATCAACGGAAGCAGCTTCCCATATCGKGTAAAAGTGCAACCCAATAGCT 4383 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||| | || | | || ||||| ||||||||||| ||||| | || || || ||| Sbjct 4382 GCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAA 4323 Query 41364 AC 41365 || Sbjct 4322 AC 4321 >seq424 Length=105662 Score = 360 bits (398), Expect = 5e-95 Identities = 570/822 (69%), Gaps = 2/822 (0%) Strand=Plus/Minus Query 40695 ATACCCATGGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGC 40754 ||||| | | ||| | ||| || || | || || ||||| |||| ||||| |||| Sbjct 95694 ATACCTAAAGCGGTGAACCAGATACCTACTACAGGCCAAGCAGCAAGGAAGAAATGTAAA 95635 Query 40755 GCACGGCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCA 40814 | ||| ||||||||| ||||||||| || || | || ||||| ||||| || ||| Sbjct 95634 GAACGAGAATTGTTGAAACTAGCATATTGGAAGATAAATCGGCCAAAATAACCATGAGCA 95575 Query 40815 GCTACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCA 40874 |||||||| |||||||| || | || || || || | || || | || |||||| Sbjct 95574 GCTACGATATTATAAGTTTCTTCCTCTTGCCCGAATATGTAACCTTCATTAGCAGATTCA 95515 Query 40875 GTTTCCGTGGTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAAC 40934 |||| ||||| |||| || | ||||| || | | || ||||||||| || Sbjct 95514 TTTTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAAT 95455 Query 40935 AAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTG 40994 | | | || || || || || || | | ||| || ||||||||||| || |||||| Sbjct 95454 AGGGAGCYGCCGAATACACCAGCTACASCTAACATGTGAAATGGGTGCATAAGGATGTTG 95395 Query 40995 TGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCA 41054 || || | ||||| |||| |||||||||||| || ||| |||||||| ||||||||| Sbjct 95394 TGCTCAGTCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCG 95335 Query 41055 TCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAAT 41114 ||| | || || | ||| | ||| || | ||||| |||| ||| |||| | Sbjct 95334 TCAKAAAAGCTTCCTTKACCAATTGGGTAKATYAAGAAAACAGYAGTAGCAGCTGCAACA 95275 Query 41115 GGAGCTGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCAC 41174 ||||||| ||||| ||| ||||| || | |||||| || | | | |||||||||| Sbjct 95274 GGAGCTGAATATGCAACAGCAATCCAAGGACRCATACCCAGACGGAAACTAAGTTCCCAC 95215 Query 41175 TGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGT 41234 | |||||| ||| |||||| || | ||| ||||| | ||||| || | ||| || Sbjct 95214 TCTCTACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGA 95155 Query 41235 CCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGT 41294 || || ||||||| ||| || || | | | |||||||| || | ||| || || | Sbjct 95154 CCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGRGTAAAAGTGCAAC 95095 Query 41295 CCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAAC 41354 || || || ||| | || | | || ||||| ||||||||||| ||||| | || Sbjct 95094 CCRATAGCTGCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTTTCCGTAAARTAGA 95035 Query 41355 GAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCG 41414 || || ||||| || |||| || ||||| ||||||| || || || || || |||| Sbjct 95034 GATCCAGAAACAGGTTCACTAATACCATCAATATCTATTGGAGGAGCAGCAATGAAGGYA 94975 Query 41415 ATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACC 41473 || || || ||| | || || || | ||| | || ||||| | ||||||||||| || Sbjct 94974 ATAATAAATACA-GAAGTTGCRGTCAATAAGGTAGGGATCATYAAAACACCAAACCATCC 94916 Query 41474 TACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | ||| || ||||| | ||||| || | ||||||||| || Sbjct 94915 AATGTAAAGACGGTTTTTAGTGCTGGTTATCCAGTTACAGAA 94874 Score = 327 bits (362), Expect = 3e-85 Identities = 534/774 (69%), Gaps = 2/774 (0%) Strand=Plus/Plus Query 40743 AAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAG 40802 ||||| |||| | ||| ||||||||| ||||||||| || || | || ||||| Sbjct 26673 AAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAA 26732 Query 40803 TAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAG 40862 ||||| | ||||||||||| |||||||| || | || || || || | || | | Sbjct 26733 TAACCATAAGCAGCTACGATATTATAAGTTTCTTCCTCTTGCCCGAATCTGTAAACTTCA 26792 Query 40863 TTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGC 40922 || |||||| |||| |||| ||| || | ||||| || | | || ||| Sbjct 26793 TTAGCAGATTCATTTTCTATGGTTTCCTTGATCAAACTAGAAGTTACCAAGGAACCATGC 26852 Query 40923 ATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGC 40982 |||||| || | | | || || || || || || || | ||| || ||||||||| Sbjct 26853 ATAGCACTGAATAGGGAGCYGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGC 26912 Query 40983 ATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCT 41042 || || |||||||| || || ||||| |||| |||||||||||| || ||| ||||||| Sbjct 26913 ATAAGGATGTTGTGCTCAGCCTGGAACACAATCATGAAGTTGAAAGTACCAGAGATTCCT 26972 Query 41043 AAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGA 41102 | ||||||||| ||||| || || | ||| | ||| || | ||||| ||||| | Sbjct 26973 AGAGGCATACCGTCAGAAAAGCTTCCTTTACCAATTGGGTAGATCAAGAAAACAGCAGTA 27032 Query 41103 GCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTAT 41162 || |||| | ||||||| ||||| ||| ||||| || | |||||| || | | | Sbjct 27033 GCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACACATACCCAGACGGAAA 27092 Query 41163 GAAAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATG 41222 ||||||||||| || ||| ||| |||||| || | ||| | ||| | ||||| Sbjct 27093 CTAAGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAWGTGTAGAACAATT 27152 Query 41223 AGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGG 41282 || | ||| || || || ||||||| ||| || || | | |||||||| || ||| Sbjct 27153 AGCTCATAAGGACCACCATTGTATAACCATTCATCAACGRAAGCAGCTTCCCATATCGGG 27212 Query 41283 TAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTC 41342 || || || | || || || ||| | || | | || ||||| ||||||||||| Sbjct 27213 TAAAAGTGCAACCCRATAGCTGCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTTT 27272 Query 41343 CCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCT 41402 ||||| | || || || |||| || |||| || ||||| ||| |||| || || || Sbjct 27273 CCGTAAARTAGAGATCCAKAAACAGGTTCACKAATACCATCAATAYCTACTGGAGGAGCA 27332 Query 41403 GCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCAC 41461 || || ||||| || || || ||| | || || || | ||| | || ||||| | || Sbjct 27333 GCAATGAAGGCAATAATAAATACA-GAAGTTGCRGTCAATAAGGTAGGGATCATCAAAAC 27391 Query 41462 ACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||||||| || | || || ||| || ||||| || | ||||||||| || Sbjct 27392 ACCAAACCATCCAATRTAAAGAYRGTTTTCAGTGCTGGTTATCCAGTTACAGAA 27445 >seq76 Length=1023076 Score = 154 bits (170), Expect = 4e-33 Identities = 183/248 (74%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||||||||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct 1004556 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATA 1004497 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || ||| | | ||||| || ||||||||| ||| ||| || ||| | | || Sbjct 1004496 CCAAGATTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCA 1004437 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 ||||| || ||||| || || |||||||| | ||| ||||||||||| ||||| | Sbjct 1004436 ACTACAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAA 1004377 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||| | ||| || || | || || ||||| | || ||||| |||| | ||| | Sbjct 1004376 GCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 1004317 Query 40764 TTGTTGAA 40771 |||||||| Sbjct 1004316 TTGTTGAA 1004309 >seq850 Length=2209 Score = 147 bits (162), Expect = 6e-31 Identities = 219/309 (71%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 41208 AAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCG 41267 ||||| | ||||| || | ||| || || || ||||||| ||| || || | | | Sbjct 335 AAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCA 276 Query 41268 GCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCA 41327 |||||||| || ||||| || || | || || || ||| | || | | || ||| Sbjct 275 GCTTCCCATATCGGGTAAAAGTGCAACCCAATAGCTGCAGAAGTAGGGATAATGGCACCA 216 Query 41328 GATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATA 41387 || ||||||||||| ||||| | || || || ||||| || ||||| || ||||| ||| Sbjct 215 GAWATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATA 156 Query 41388 TCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGC 41446 ||||| || || || || || ||||| || || || ||| | || || || | ||| | Sbjct 155 TCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA-GAAGTTGCGGTCAATAAGGT 97 Query 41447 TGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCA 41506 || ||||| | ||||||||||| || | || || ||||| || ||||| || | ||| Sbjct 96 AGGGATCATCAAAACACCAAACCATCCAATATAAAGACGGTTTTCAGTGCTGGTTATCCA 37 Query 41507 GTTACAAAA 41515 |||||| || Sbjct 36 GTTACAGAA 28 >seq8 Length=4047118 Score = 131 bits (144), Expect = 5e-26 Identities = 214/306 (70%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 41166 AGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGT 41225 |||||||||| || ||| ||| |||||| || | ||| ||||| | ||||| || Sbjct 2332246 AGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAGC 2332187 Query 41226 TGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAG 41285 | ||| || || || ||||||| ||| || || | | | |||||||| || ||||| Sbjct 2332186 TCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGGGTAA 2332127 Query 41286 AAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCG 41345 || || | || || || ||| | || | | || ||||| ||||||||||| ||| Sbjct 2332126 AAGTGCAACCCAATAGCTGCAGAAGTAGGGATAATGGCACCAGAAATAATATTGTTTCCG 2332067 Query 41346 TACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCG 41405 || | || || || ||||| || ||||| || | ||| |||||||| || || || || Sbjct 2332066 TAAAGTAGAGATCCAGAAACAGGTTCACGAATACTATCAATATCTACTGGAGGAGCAGCA 2332007 Query 41406 ATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACC 41464 || ||| | || || || ||| | || || || | ||| | || ||||| | ||||| Sbjct 2332006 ATGAAGACAATAATAAATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACC 2331948 Query 41465 AAACCA 41470 |||||| Sbjct 2331947 AAACCA 2331942 >seq55 Length=1179671 Score = 127 bits (140), Expect = 6e-25 Identities = 210/302 (70%), Gaps = 11/302 (4%) Strand=Plus/Minus Query 40534 CTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTCT 40593 ||| ||||||||| ||||||||||| |||| || ||||| |||| |||||| ||| | Sbjct 344380 CTAGGTCTAGAGGGAAGTTGTGAGCACTACGTTCATGCATAACTTTCATACCAAGATTAG 344321 Query 40594 GTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGACT 40653 | ||||| || ||||||||||||| ||| || ||| | | || ||||| || | Sbjct 344320 CACGGTTAATAATATCAGCCCAAGTATTAATTACACAACCTTGACTATCAACTACAGATT 344261 Query 40654 GGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATAC-CCATGGAGGTAAGC 40712 |||| || || |||||||| | ||| |||| |||| || | | || | || | | Sbjct 344260 GGTTGAAATTGAAACCATTTAAGTTGAAAGTCATA------ATGCGCGGTGAACGTGAAC 344207 Query 40713 CATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAAT 40772 || || || | | || ||||| | | ||||| |||| | | | ||||||||| Sbjct 344206 CAGATACCTACTGCAGGCCAAGCAGCTAAGAAGAAATGTAAAGAAAGAGAATTGTTGAAA 344147 Query 40773 GAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTC 40832 ||||||||| || || | | ||||| ||||| || | |||||| |||||||| Sbjct 344146 CTAGCATATTGGAAGATAAATTGGCCAAAATAACCATGAG----TACGATATTATAAGTT 344091 Query 40833 TC 40834 || Sbjct 344090 TC 344089 >seq96 Length=850568 Score = 111 bits (122), Expect = 5e-20 Identities = 172/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 41045 AGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGC 41104 ||||||||| ||||| || || ||||| | ||| || | ||||| ||||| ||| Sbjct 64587 AGGCATACCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGC 64646 Query 41105 TGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGA 41164 |||| | ||||||| ||||| ||| ||||| || | |||||| || | | | Sbjct 64647 AGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACT 64706 Query 41165 AAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAG 41224 ||||||||||| || ||| ||| |||||| || | ||| ||||| | ||||| || Sbjct 64707 AAGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAG 64766 Query 41225 TTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTA 41284 | ||| || || || ||||||| ||| || || | | | |||||||| || ||||| Sbjct 64767 CTCATAAGGACCACCATTGTATAACCATTCATCAACGGAAGCAGCTTCCCATATCGGGTA 64826 Query 41285 GAAATG 41290 || || Sbjct 64827 AAAGTG 64832 >seq84 Length=945972 Score = 84.2 bits (92), Expect = 6e-12 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 40968 ATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAAT 41027 || || ||||||||||| || |||||||| || | || || |||| |||||||||||| Sbjct 55069 ATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGTTTTTAATACAATCATGAAGTTGAAA 55128 Query 41028 GTTCCACTGATTCCTAAAGGCATACC-ATCA 41057 || ||| ||||||||||||||||| |||| Sbjct 55129 GTACCATATATTCCTAAAGGCATACCGATCA 55159 >seq23 Length=1845300 Score = 80.6 bits (88), Expect = 8e-11 Identities = 109/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 || || || |||||| ||| ||||||| |||| || ||||| ||||||||||| ||| | Sbjct 1114786 AGTTAGGTGTAGAGGGAAGCTGTGAGCATTACTTTCATGCATAACTTCCATACCAAGATT 1114845 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 | |||| || || |||| | || ||| || ||| | | || ||||| || Sbjct 1114846 AACACACTTAATAATATTAGCCTATATATAAATTACACGACCTTAACTATCAACTACAGA 1114905 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAG 40683 ||||| || ||||||||||| | ||| |||| Sbjct 1114906 TTGGTTGAAATTAAAACCATTTAAGTTGAAAG 1114937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143700604797768