Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq21 82.4 1e-10 >seq21 Length=2013095 Score = 82.4 bits (90), Expect = 1e-10 Identities = 123/171 (72%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 194236 CGTATACCTGAAATAGGGGATAAATTTTGT--TCGGGAATGGCTCAAAAAGGAACTTGTG 194293 || |||||| | || |||||||| || || |||| | ||| |||||||||||| | Sbjct 1216863 CGAATACCTCAGATTGGGGATAAGTTCAGTAGTCGGCA-TGG-TCAAAAAGGAACAGTGG 1216920 Query 194294 GTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTA 194353 | |||| |||| |||||||||| ||||| | || ||| || || ||||||| Sbjct 1216921 GGATGACTTATACACAAGAAGACATGCCTTGGACTGTGGAAGGAATCACCCCTGATATTA 1216980 Query 194354 TTATCAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 194404 || | |||||| || |||||| || ||||||| ||| ||| |||||| Sbjct 1216981 TTGTGAATCCACATGCTATTCCCTCTCGAATGACTATTGGTCAGCTTATTG 1217031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632481282761760