Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq21 82.4 1e-10
>seq21
Length=2013095
Score = 82.4 bits (90), Expect = 1e-10
Identities = 123/171 (72%), Gaps = 4/171 (2%)
Strand=Plus/Plus
Query 194236 CGTATACCTGAAATAGGGGATAAATTTTGT--TCGGGAATGGCTCAAAAAGGAACTTGTG 194293
|| |||||| | || |||||||| || || |||| | ||| |||||||||||| |
Sbjct 1216863 CGAATACCTCAGATTGGGGATAAGTTCAGTAGTCGGCA-TGG-TCAAAAAGGAACAGTGG 1216920
Query 194294 GTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTA 194353
| |||| |||| |||||||||| ||||| | || ||| || || |||||||
Sbjct 1216921 GGATGACTTATACACAAGAAGACATGCCTTGGACTGTGGAAGGAATCACCCCTGATATTA 1216980
Query 194354 TTATCAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 194404
|| | |||||| || |||||| || ||||||| ||| ||| ||||||
Sbjct 1216981 TTGTGAATCCACATGCTATTCCCTCTCGAATGACTATTGGTCAGCTTATTG 1217031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632481282761760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |