Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq124 98.7 2e-15 seq14 84.2 3e-11 >seq124 Length=632428 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || ||||| ||||||||||| ||| | || || || | | Sbjct 447236 TGCAGATTTTTGTGAAGACCTTAACGGGAAAAACAATCACTCTGGAGGTTGAGAGTTCGG 447177 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || |||||| ||| |||||| ||||| ||||| || || | Sbjct 447176 ATACCATCGACAACGTGAAGGCTAAAATTCAAGATAAAGAGGGCATCCCACCAGACCAGC 447117 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||| || || || ||| | || || || || || | || ||||||| Sbjct 447116 AGAGGCTGATTTTCGCTGGAAAGCAACTGGAAGACGGCAGGACTTTGGCCGACTATAATA 447057 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | |||||||| |||||| ||||| ||| Sbjct 447056 TTCAAAAAGAGTCGACTTCGCATTTGGTA 447028 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | ||||| | || || ||||||||||| |||| || ||| | | Sbjct 447920 TGCAGATATTTGTGAAAACTCTCACCGGCAAAACAATTACCCTTGAGGTTGAAAGTTCTG 447861 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | |||||||| ||||| || || ||||| |||||||| || || | Sbjct 447860 ATACTATTGACAATGTAAAGGCCAAAATTCAGGACAAGGAAGGAATTCCACCGGACCAGC 447801 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || || || || || || | || || |||| | | ||||| || | Sbjct 447800 AGAGGCTAATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGAACCCTGGCCGATTACAACA 447741 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 |||||||||| || || |||| || || | || ||| | || || Sbjct 447740 TACAAAAAGAGTCCACGCTCCACTTGGTGCTCCGTTTACGCGGTGG 447695 >seq14 Length=2855554 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || || |||||||| || | || || || | Sbjct 998889 TGCAGATTTTTGTTAAAACCTTGACTGGCAAAACAATCACCTTGGAGGTCGAGAGCTCTG 998948 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| ||| || || ||| ||| || ||||||||||| || |||| Sbjct 998949 ATACAATCGATAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATTCCACCTGACCAAC 999008 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| ||||| ||| | || || ||| || | |||||||||| | Sbjct 999009 AGAGGTTGATCTTTGCTGGTAAGCAACTCGAAGACGGTAGGACTCTGGCAGATTATAACA 999068 Query 146212 TACAAAAAGAATCGAC 146227 | || || |||||||| Sbjct 999069 TCCAGAAGGAATCGAC 999084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786156061911840