Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq124 95.1 1e-14
seq14 95.1 1e-14
>seq124
Length=632428
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || |||||||| | || || || | || || ||||||||||||||||||||| |
Sbjct 447695 CCACCGCGTAAACGGAGCACCAAGTGGAGCGTGGACTCTTTTTGTATGTTGTAATCGGCC 447754
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | ||||||||| || || ||||| |||| || | ||||| || || ||
Sbjct 447755 AGGGTTCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATTAGCCTCTGCTGGTCCGGTGGA 447814
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| ||||| |||||| |||| | || | || || | ||| ||
Sbjct 447815 ATTCCTTCCTTGTCCTGAATTTTGGCCTTTACATTGTCAATAGTATCAGAACTTTCAACC 447874
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | || |||||||| | ||||| || ||||| |||||
Sbjct 447875 TCAAGGGTAATTGTTTTGCCGGTGAGAGTTTTCACAAATATCTGCAT 447921
>seq14
Length=2855554
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||| || || | || || || | ||| ||||| || |||||||||||||| |
Sbjct 999342 CCGCCTCGCAACCGAAGCACCAAGTGCAGTGTCGATTCCTTCTGTATGTTGTAATCTGCC 999283
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || ||||| ||||| ||||||||| ||||||| | || || || || ||
Sbjct 999282 AGAGTCCTACCATCTTCTAGTTGCTTACCAGCAAAGATCAGCCTCTGTTGGTCAGGTGGG 999223
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
||||| || ||||| || || ||| | | || | || || | | || |||
Sbjct 999222 ATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTGTCAATGGTATCAGAGCTCTCCACT 999163
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | ||| | ||||||||| ||||| || || || || || |||||
Sbjct 999162 TCCAAAGTGATCGTCTTGCCTGTCAAGGTCTTCACAAAAATCTGCAT 999116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488537575646400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |