Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq36 105 2e-17 >seq36 Length=1471653 Score = 105 bits (116), Expect = 2e-17 Identities = 115/149 (77%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 304989 AAGGTAAAG-AGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047 |||| |||| | ||||| || ||||||| | |||||||||||||| |||||| ||| Sbjct 1267739 AAGGCAAAGGAAGGTCGGATCAGAGGTAACTTGATGGGAAAACGTGTGGATTTTTCAGCA 1267798 Query 305048 AGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGA- 305106 |||| || |||||||||||| | ||||| | || ||||||| ||||| || | || Sbjct 1267799 AGAACAGTTATCACACCTGATCCAACAATTAATATTGATGAATTGGGAGTGCC-GTGGAG 1267857 Query 305107 AATTGCTTTAAAACTAACATTTCCAGAGA 305135 |||||||| || || |||| |||||||| Sbjct 1267858 TATTGCTTTGAATCTTACATATCCAGAGA 1267886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186796803246972