Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq14 87.8 2e-12
>seq14
Length=2855554
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGT 131961
||||| || | |||||||| | |||| || ||||| |||||||| || ||| | | |
Sbjct 999564 CGCAATCGAAGCACCAAATGCAGAGTTGATTCCTTTTGGATGTTGTAATCTGCTAAAGTT 999505
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| | |||||||| || || || | |||| | | |||||| ||||| || |||||
Sbjct 999504 CTGCCA-TCTTCGAGTTGCTTGCCTGCGAAGATCAACCTCTGTTGGTCTGGTGGGATGCC 999446
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || ||| ||| |||| | || | ||||||| ||||||||| |
Sbjct 999445 CTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATGGTATCGGAGCTCTCCACTTCCAA 999386
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || ||||||| ||||| | |||||||||||
Sbjct 999385 AGTGATTGTCTTGCCAGTCAAGGTTTTCACAAAAATCTGCAT 999344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476604932562720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |