Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 244 2e-58 >seq6 Length=5093711 Score = 244 bits (270), Expect = 2e-58 Identities = 357/500 (71%), Gaps = 10/500 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 |||||||||||||||| | |||| || |||||| || |||||||| ||||||||||||| Sbjct 4851682 GATATGGGAAATGTACAAGAAAG-CCATGGCCTCGTTCTGGACCGCTGAGGAGGTCGACC 4851740 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGC 1455894 || ||| ||| |||| || | | |||||| ||||||||| | Sbjct 4851741 TCTCACAGGACCTCCGCCATTGGGAAGGCCTCACGGCCGACGAAAAGCATTTCATCTCCC 4851800 Query 1455895 ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGC 1455954 |||| || ||||| || ||||||| |||||| ||||| ||||| || |||||||| Sbjct 4851801 ACGTTCTGGCCTTCTT-CGCCGCCTCCGATGGTATCGTTCTGGAGAATCTCGCCGGCCGG 4851859 Query 1455955 TTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATC 1456014 || ||||| ||||| || | | ||||| | ||| || || ||||| ||||| || Sbjct 4851860 TTCATGAAGGAGGTTCAGGTTGCGGAGGCTAGAGCGTTCTATGGCTTCCAAATCGCAATT 4851919 Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||| ||||| || | ||| | || |||| |||||| |||||||| | ||| Sbjct 4851920 GAGAACATTCACTCCGAGATGTACAGTTTGTTGCTCGAAACCTACATCAAGGACTCAGTC 4851979 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 |||||| || | || | ||||||||| || || || | || ||| || ||||| Sbjct 4851980 GAGAAGAACAGGTTGTTCCACGCCATCGAGACTGTACCTTGCGTCGCGAAGAAAGCCGAG 4852039 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC-TTTGCCGAGCGGCTCGTCGGC 1456193 |||||| | || |||||| || ||| ||| | ||||| ||||| || | ||| Sbjct 4852040 TGGGCGCTAAAATGGATCGAC------GGCTCCGAGTCGTTTGCAGAGCGTCTGATTGGC 4852093 Query 1456194 TTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAG 1456252 || || | || || || || || |||||||| |||||||||||||| || ||||| ||| Sbjct 4852094 TTCGCATGTGTGGAAGGTATTTTCTTCTCGGGAAGTTTCTGCGCCATATTCTGGCTGAAG 4852153 Query 1456253 AAGCGCGGCCTCATGCCCGG 1456272 || || ||||| ||||| || Sbjct 4852154 AAACGAGGCCTTATGCCAGG 4852173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177709732666424