Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 183 3e-41
seq15 179 4e-40
seq14 178 1e-39
seq124 168 8e-37
seq21 168 8e-37
seq6 113 5e-20
seq60 107 2e-18
>seq4
Length=5448771
Score = 183 bits (202), Expect = 3e-41
Identities = 179/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || ||| | || || ||||| || ||||| ||||||||| || |
Sbjct 199773 ATGCAGATCTTTGTGAAAACGTTGACGGGGAAGACCATAACTCTCGAGGTTGAG--AGCT 199716
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||| | ||| ||||||| || |||||||||||||||||||| || || ||||
Sbjct 199715 CCGATACCATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAGGGAATACCGCCGGACC 199656
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||||| || |||||||||||||| || ||||| | || |||||||| || || |
Sbjct 199655 AGCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGAACCCTAGCCGATTACA 199596
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||| ||||| || || || || || | || || |||||
Sbjct 199595 ACATCCAGAAGGAGTCCACGCTCCACCTCGTGTTAAGGCTCCGTGGTGG 199547
Score = 179 bits (198), Expect = 4e-40
Identities = 165/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || ||||| || || ||||| || ||||| ||||| ||| |
Sbjct 205448 ATGCAGATCTTCGTGAAAACGCTGACAGGGAAGACCATAACTCTCGAGGTCGAGAGTTCT 205389
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||||| || |||||||||||||||||||| || || ||||||
Sbjct 205388 GATACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATACCGCCGGACCAG 205329
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||||||||||||||| || ||||||| ||| || || || ||||| ||
Sbjct 205328 CAGCGTCTCATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGAACTCTTGCCGACTACAAC 205269
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| || || ||||| || || || ||
Sbjct 205268 ATCCAGAAAGAGTCCACCCTACACCTTGT 205240
>seq15
Length=2492501
Score = 179 bits (198), Expect = 4e-40
Identities = 179/230 (78%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| |||||||| ||||| || || | ||||| ||| ||
Sbjct 255839 AATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACCTTGGAGGTGGAG--AGC 255782
Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| |||| |||| || ||||||| || ||||||||||||||||||||||||||||||
Sbjct 255781 TCAGATACGATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGAATTCCTCCAGAC 255722
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | | || |||||||| ||||| || ||||||| | || || || || ||
Sbjct 255721 CAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGGAGGACTCTGGCTGATTAC 255662
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| ||||||||||| || ||| | ||||| || |||||
Sbjct 255661 AACATCCAGAAGGAGTCCACTCTTCACCTTGTCCTTCGTCTCCGAGGTGG 255612
>seq14
Length=2855554
Score = 178 bits (196), Expect = 1e-39
Identities = 178/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTG--AGTCAG 27463
||||||||||| || || || || || ||||| || || || || ||||| | ||| |
Sbjct 998432 ATGCAAATCTTCGTGAAAACTCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGTTCG 998491
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||||| ||| | ||||| || || || || || |||||||||||||| ||||
Sbjct 998492 --GATACCATTGACAATGTAAAGGCAAAGATCCAAGATAAAGAGGGAATTCCTCCCGACC 998549
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| | || || || |||||||||||||||||||||| ||| ||||| || || || |
Sbjct 998550 AGCAAAGGCTTATCTTCGCTGGTAAGCAACTCGAGGATGGTCGAACCCTTGCCGATTACA 998609
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| |||||||| ||||||||||| || | | |||||||||||
Sbjct 998610 ATATCCAGAAGGAATCTACTCTTCATCTGGTGCTTAGACTTCGCGGTGG 998658
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| ||||| ||||| || || || |||||||| || |
Sbjct 998660 ATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATCACGCTTGAGGTGGAAAGTTCT 998719
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| ||||||||||||| || || |||||||| || ||||| || ||
Sbjct 998720 GATACGATTGACAATGTGAAGGCTAAAATCCAAGATAAGGAGGGTATCCCTCCTGATCAA 998779
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||||||||||||||| || ||||| | ||||| || || ||||| |||
Sbjct 998780 CAGAGGCTGATTTTTGCTGGTAAGCAGCTTGAGGACGGCCGTACTCTTGCTGACTACAAT 998839
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || ||||| ||| | ||| | || | || ||||| || ||
Sbjct 998840 ATCCAGAAAGAATCTACTTTGCATTTGGTGCTTCGGCTTCGTGGGGG 998886
Score = 141 bits (156), Expect = 1e-28
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || | || |||||||| || ||| | || || ||| || |
Sbjct 999344 ATGCAGATTTTTGTGAAAACCTTGACTGGCAAGACAATCACTTTGGAAGTGGAG--AGCT 999401
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||||| ||| ||||||| || ||||| ||||||||||| || || |||||||
Sbjct 999402 CCGATACCATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATCCCACCAGACC 999461
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
| ||| | | || || || || ||||||||||| |||| | || ||||||| || |
Sbjct 999462 AACAGAGGTTGATCTTCGCAGGCAAGCAACTCGAAGATGGCAGAACTTTAGCAGATTACA 999521
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||||| ||||| ||| | || | || | ||||||||
Sbjct 999522 ACATCCAAAAGGAATCAACTCTGCATTTGGTGCTTCGATTGCGCGGTGG 999570
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| | || |||||||| || ||| | || || ||| |
Sbjct 999116 ATGCAGATTTTTGTGAAGACCTTGACAGGCAAGACGATCACTTTGGAAGTGGAGAGCTCT 999175
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| |||| || || || || ||||||||||| || || || |||||
Sbjct 999176 GATACCATTGACAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAA 999235
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||||||||||||||| || |||| | | || || ||||| || ||
Sbjct 999236 CAGAGGCTGATCTTTGCTGGTAAGCAACTAGAAGATGGTAGGACTCTGGCAGATTACAAC 999295
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| || |||||||| || || ||
Sbjct 999296 ATACAGAAGGAATCGACACTGCA 999318
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || | || ||||| || || || | ||||| ||| |
Sbjct 998888 ATGCAGATTTTTGTTAAAACCTTGACTGGCAAAACAATCACCTTGGAGGTCGAGAGCTCT 998947
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| |||| || || || || || |||||||| ||||| || |||||
Sbjct 998948 GATACAATCGATAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATTCCACCTGACCAA 999007
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || |||||||||||||||||||| || | | | || || ||||| |||||
Sbjct 999008 CAGAGGTTGATCTTTGCTGGTAAGCAACTCGAAGACGGTAGGACTCTGGCAGATTATAAC 999067
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || || || || || | || | || |||||
Sbjct 999068 ATCCAGAAGGAATCGACACTGCACCTGGTGCTCCGATTGCGTGGTGG 999114
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || || ||||| || || | ||||| || || |
Sbjct 999572 ATGCAGATCTTTGTGAAGACACTGACAGGGAAGACGATCACGTTGGAGGTCGAA--AGCT 999629
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | || | || ||||||| || ||||| ||||||||||| ||||||||||| |
Sbjct 999630 CGGACACAATCGACAACGTGAAGGCAAAGATTCAAGACAAGGAGGGGATTCCTCCAGATC 999689
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
| ||| | | || |||||||| || ||||| ||||||| || || | || || || |
Sbjct 999690 AACAGAGATTGATCTTTGCTGGGAAACAACTGGAGGATGGGCGAACTTTGGCGGATTACA 999749
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | || || || || || || || || ||| | || || ||||||||
Sbjct 999750 ACATTCAGAAAGAGTCGACCCTCCACCTCGTCCTCCGCCTGCGCGGTGG 999798
>seq124
Length=632428
Score = 168 bits (186), Expect = 8e-37
Identities = 177/231 (77%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || ||||| ||||| || || |||||||| || | |||||||| ||
Sbjct 447466 AATGCAAATTTTCGTCAAAACGCTCACGGGAAAGACTATCACATTGGAGGTTGAA--AGC 447409
Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| || | |||| ||| | || ||||| ||||| |||||||| || || |||||||||
Sbjct 447408 TCCGACACAATTGACAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATCCCTCCAGAC 447349
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||| | |||||||| || || ||||| || || |||| || || || || || ||
Sbjct 447348 CAGCAAAGGCTAATTTTCGCAGGCAAGCAGCTTGAAGATGGACGGACTCTTGCCGATTAC 447289
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| | |||||||| || |||||||||||||| | |||||||||||||||
Sbjct 447288 AACATTCAAAAGGAGTCAACTCTTCATCTAGTGCTCCGTCTTCGCGGTGGA 447238
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || |||||||| || ||||| ||||||||||| |
Sbjct 447921 ATGCAGATATTTGTGAAAACTCTCACCGGCAAAACAATTACCCTTGAGGTTGAAAGTTCT 447862
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | ||||| ||||||||||||||||| |||||||| || ||||||
Sbjct 447861 GATACTATTGACAATGTAAAGGCCAAAATTCAGGACAAGGAAGGAATTCCACCGGACCAG 447802
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | ||||| || ||||| ||||| ||||| || | || ||||| || || || ||
Sbjct 447801 CAGAGGCTAATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGAACCCTGGCCGATTACAAC 447742
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || ||||| || || | || | ||| | ||||||||
Sbjct 447741 ATACAAAAAGAGTCCACGCTCCACTTGGTGCTCCGTTTACGCGGTGG 447695
Score = 143 bits (158), Expect = 3e-29
Identities = 174/233 (75%), Gaps = 7/233 (3%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| ||||| | || || || || || ||||| ||||||||| ||
Sbjct 447238 AATGCAGATTTTTGTGAAGACCTTAACGGGAAAAACAATCACTCTGGAGGTTGAG--AGT 447181
Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| |||| ||| | || |||||||||||||||| || || ||||| || || ||||||
Sbjct 447180 TCGGATACCATCGACAACGTGAAGGCTAAAATTCAAGATAAAGAGGGCATCCCACCAGAC 447121
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | || ||||| ||||| |||||||| || || | | || | || ||||||
Sbjct 447120 CAGCAGAGGCTGATTTTCGCTGGAAAGCAACTGGAAGACGGCAGGACTTTGGCCGACTAT 447061
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT-CT--TGCGTCTTCGCGGTGG 27632
||| | ||||| || || ||| ||| | || || |||||||||| |||||
Sbjct 447060 AATATTCAAAAAGAGTCGACTTCGCATTTGGTACTGCTGCGTCTTCGTGGTGG 447008
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || || || || || || || || | ||||| || |
Sbjct 447693 ATGCAAATCTTCGTGAAAACCCTCACTGGAAAAACCATCACCTTGGAGGTGGAAAGCTCT 447634
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||||| || || || || || ||||| ||||| || ||||||
Sbjct 447633 GATACCATCGACAATGTGAAGGCCAAGATCCAAGATAAAGAGGGTATTCCACCGGACCAG 447574
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| || ||||| |||||||| |||| || || || || ||||| |||
Sbjct 447573 CAGAGGCTGATTTTCGCGGGTAAACAACTCGAAGATGGCCGCACTCTGGCTGACTACAAT 447514
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || |||||||| || | ||| | || | |||||||| || |||
Sbjct 447513 ATTCAGAAGGAATCAACATTGCATTTGGTGCTTCGTCTTCGTGGGGGA 447466
Score = 107 bits (118), Expect = 2e-18
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || || || || || || || || | |||| || | || |
Sbjct 354260 ATGCAAATCTTCGTGAAAACCCTCACTGGAAAAACCATCACCTTGGAGGGTG-GAAAGCT 354318
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||| | ||| |||| || || || || || || ||||| || || |||||||
Sbjct 354319 CTGATACCATCGACAATGTGAARGCCAAGAT-CAAGAAAAAGAGGGCATCCCACCAGACC 354377
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | | ||||| ||||| |||||||| || | | | || | || |||||||
Sbjct 354378 AGCAGAGGTTGATTTTCGCTGGAAAGCAACTGGAACACGGCAGGACTTTGGCCGACTATA 354437
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | ||||| || || ||| | ||| | || |||||||||| |||||
Sbjct 354438 ACATTCAAAAAGAGTCGACTTTGCATTTGGTACTGCGTCTTCGTGGTGG 354486
>seq21
Length=2013095
Score = 168 bits (186), Expect = 8e-37
Identities = 176/229 (77%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || | || || ||||| || ||||| ||||| ||| || |
Sbjct 1809684 ATGCAAATCTTTGTGAAAACCTTGACTGGGAAGACCATCACTCTGGAGGTGGAG--AGCT 1809741
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||||| ||| |||| || |||||||||||||||||||| |||||||| || |
Sbjct 1809742 CCGACACCATTGACAATGTGAAAGCCAAAATTCAGGACAAGGAGGGTATTCCTCCGGATC 1809801
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| | || ||||| || || ||||| || ||||||| | || || || || || |
Sbjct 1809802 AGCAAAGGCTGATTTTCGCAGGGAAGCAGCTGGAGGATGGAAGGACTCTCGCTGATTACA 1809861
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | || ||||| ||||||||||| || ||| ||||||| || |||||
Sbjct 1809862 ATATTCAGAAGGAGTCCACTCTTCACCTTGTCCTGCGTCTCCGTGGTGG 1809910
Score = 132 bits (146), Expect = 5e-26
Identities = 150/199 (75%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||||||| | ||||| || || ||||| || ||||||||| || |
Sbjct 1809456 ATGCAGATTTTCGTCAAGACGTTGACCGGGAAAACCATTACCCTGGAGGTTGAG--AGTT 1809513
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | ||| | |||||||| || || ||||| |||||||| || |||||||
Sbjct 1809514 CGGACACCATAGACAATGTAAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCAGACC 1809573
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | || || || || || ||||| || ||||| | | | || || || |||||||
Sbjct 1809574 AGCAGAGGCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGTAGGACTCTGGCCGACTATA 1809633
Query 27584 ATGTCCAAAAGGAATCCAC 27602
| |||| ||||| || ||
Sbjct 1809634 ACATCCAGAAGGAGTCTAC 1809652
Score = 105 bits (116), Expect = 8e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561
|||||||| || || || ||||| || | ||||| ||||| || |||||||| |||||
Sbjct 1809324 AAGGAGGGCATCCCCCCGGACCAACAAAGACTAATCTTTGCCGGGAAGCAACTGGAGGAC 1809383
Query 27562 GATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
| ||| ||||| || || ||||| | || ||||| || || || || || |||||||||
Sbjct 1809384 GGTCGCACCCTTGCTGATTATAACATTCAGAAGGAGTCGACCCTGCACCTTGTCTTGCGT 1809443
Query 27622 CTTCGCGGTGG 27632
||||| |||||
Sbjct 1809444 CTTCGTGGTGG 1809454
>seq6
Length=5093711
Score = 113 bits (124), Expect = 5e-20
Identities = 366/564 (65%), Gaps = 12/564 (2%)
Strand=Plus/Plus
Query 64297 TTCCCAATTAGGTACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGG 64356
||||||||| ||| ||| | | ||||| | |||||||||||||| || ||||||
Sbjct 4851662 TTCCCAATTGAGTATCCTCAGATATGGGAAATGTACAAGAAAGCCATGGCCTCGTTCTGG 4851721
Query 64357 ACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG 64416
|| | |||||||| || ||| | |||| ||| || | |||||| ||| | | |
Sbjct 4851722 ACCGCTGAGGAGGTCGACCTCTCACAGGACCTCCGCCATTGGGAAGGCCTCACGGCCGAC 4851781
Query 64417 GAACAGCACTTCATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTT 64476
||| |||| |||||| || || || |||||||| | || || || || |
Sbjct 4851782 GAAAAGCATTTCATCTCCCACGTTCTGGCCTTCTTCGCCGCCTCCGATGGTATCGTTCTG 4851841
Query 64477 GAGAATTTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTAT 64536
|||||| | | | || | ||||| |||||| | | ||||| | | ||||||
Sbjct 4851842 GAGAATCTCGCCGGCCGGTTCATGAAGGAGGTTCAGGTTGCGGAGGCTAGAGCGTTCTAT 4851901
Query 64537 GCGTATCAG---GGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGAC 64593
| | || | | || | ||| ||||| ||||| ||| | || | ||
Sbjct 4851902 GGCTTCCAAATCGCAATTGA-GAAC--ATTCACTCCGAGATGTACAGTTTGTTGCTCGAA 4851958
Query 64594 AAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCC 64653
| | | ||| | ||||||||| | | ||||| || || |||||||||||
Sbjct 4851959 ACCTACATCAAGGACTCAGTCGAGAAGAACAGGTTGTTCCACGCCATCGAGACTGTACCT 4852018
Query 64654 GCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTC---GTCGTTT 64710
|| | || || || || ||||| | ||||| | || || |||||||
Sbjct 4852019 TGCGTCGCGAAGAAAGCCGAGTGGGCGCTAAAATGGATCGAC---GGCTCCGAGTCGTTT 4852075
Query 64711 GGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGT 64770
| ||||||| | || || ||||||||||| |||||||| || || |||||
Sbjct 4852076 GCAGAGCGTCTGATTGGCTTCGCATGTGTGGAAGGTATTTTCTTCTCGGGAAGTTTCTGC 4852135
Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830
| || |||||||| || || || ||||| |||||||| || | || || ||||| ||
Sbjct 4852136 GCCATATTCTGGCTGAAGAAACGAGGCCTTATGCCAGGATTGACATTCTCAAACGAATTG 4852195
Query 64831 ATCTCTCGGGACGAGGGGCTCCAC 64854
||||| || ||||| || || |||
Sbjct 4852196 ATCTCCCGAGACGAAGGCCTGCAC 4852219
>seq60
Length=1131370
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556
||||||| || || || || || |||||||| | |||||||||||||||||||| | |
Sbjct 437254 AGGACAAAGAAGGTATCCCACCTGACCAGCAAAGGTTAATTTTTGCTGGTAAGCAATTGG 437195
Query 27557 AGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCT 27616
| |||| ||| || || ||||| ||||| |||||||||| || || ||||| || ||||
Sbjct 437194 ATGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACCTGGTCT 437135
Query 27617 TG 27618
||
Sbjct 437134 TG 437133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570302900418240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |