Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26] 1,052 sequences; 285,613,949 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4 183 3e-41 seq15 179 4e-40 seq14 178 1e-39 seq124 168 8e-37 seq21 168 8e-37 seq6 113 5e-20 seq60 107 2e-18 >seq4 Length=5448771 Score = 183 bits (202), Expect = 3e-41 Identities = 179/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || ||| | || || ||||| || ||||| ||||||||| || | Sbjct 199773 ATGCAGATCTTTGTGAAAACGTTGACGGGGAAGACCATAACTCTCGAGGTTGAG--AGCT 199716 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| ||||||| || |||||||||||||||||||| || || |||| Sbjct 199715 CCGATACCATCGACAATGTGAAGGCAAAGATTCAGGACAAGGAGGGAATACCGCCGGACC 199656 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || |||||||||||||| || ||||| | || |||||||| || || | Sbjct 199655 AGCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGAACCCTAGCCGATTACA 199596 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| ||||| || || || || || | || || ||||| Sbjct 199595 ACATCCAGAAGGAGTCCACGCTCCACCTCGTGTTAAGGCTCCGTGGTGG 199547 Score = 179 bits (198), Expect = 4e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || ||||| || || ||||| || ||||| ||||| ||| | Sbjct 205448 ATGCAGATCTTCGTGAAAACGCTGACAGGGAAGACCATAACTCTCGAGGTCGAGAGTTCT 205389 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||||| || |||||||||||||||||||| || || |||||| Sbjct 205388 GATACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATACCGCCGGACCAG 205329 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||||||||| || ||||||| ||| || || || ||||| || Sbjct 205328 CAGCGTCTCATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGAACTCTTGCCGACTACAAC 205269 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| || || ||||| || || || || Sbjct 205268 ATCCAGAAAGAGTCCACCCTACACCTTGT 205240 >seq15 Length=2492501 Score = 179 bits (198), Expect = 4e-40 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| |||||||| ||||| || || | ||||| ||| || Sbjct 255839 AATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACCTTGGAGGTGGAG--AGC 255782 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| || ||||||| || |||||||||||||||||||||||||||||| Sbjct 255781 TCAGATACGATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGAATTCCTCCAGAC 255722 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | || |||||||| ||||| || ||||||| | || || || || || Sbjct 255721 CAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGGAGGACTCTGGCTGATTAC 255662 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||||||||| || ||| | ||||| || ||||| Sbjct 255661 AACATCCAGAAGGAGTCCACTCTTCACCTTGTCCTTCGTCTCCGAGGTGG 255612 >seq14 Length=2855554 Score = 178 bits (196), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTG--AGTCAG 27463 ||||||||||| || || || || || ||||| || || || || ||||| | ||| | Sbjct 998432 ATGCAAATCTTCGTGAAAACTCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGTTCG 998491 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| | ||||| || || || || || |||||||||||||| |||| Sbjct 998492 --GATACCATTGACAATGTAAAGGCAAAGATCCAAGATAAAGAGGGAATTCCTCCCGACC 998549 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || || || |||||||||||||||||||||| ||| ||||| || || || | Sbjct 998550 AGCAAAGGCTTATCTTCGCTGGTAAGCAACTCGAGGATGGTCGAACCCTTGCCGATTACA 998609 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| |||||||| ||||||||||| || | | ||||||||||| Sbjct 998610 ATATCCAGAAGGAATCTACTCTTCATCTGGTGCTTAGACTTCGCGGTGG 998658 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| ||||| ||||| || || || |||||||| || | Sbjct 998660 ATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATCACGCTTGAGGTGGAAAGTTCT 998719 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| ||||||||||||| || || |||||||| || ||||| || || Sbjct 998720 GATACGATTGACAATGTGAAGGCTAAAATCCAAGATAAGGAGGGTATCCCTCCTGATCAA 998779 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||||||||||||||| || ||||| | ||||| || || ||||| ||| Sbjct 998780 CAGAGGCTGATTTTTGCTGGTAAGCAGCTTGAGGACGGCCGTACTCTTGCTGACTACAAT 998839 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| ||| | ||| | || | || ||||| || || Sbjct 998840 ATCCAGAAAGAATCTACTTTGCATTTGGTGCTTCGGCTTCGTGGGGG 998886 Score = 141 bits (156), Expect = 1e-28 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | || |||||||| || ||| | || || ||| || | Sbjct 999344 ATGCAGATTTTTGTGAAAACCTTGACTGGCAAGACAATCACTTTGGAAGTGGAG--AGCT 999401 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| ||||||| || ||||| ||||||||||| || || ||||||| Sbjct 999402 CCGATACCATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATCCCACCAGACC 999461 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | | || || || || ||||||||||| |||| | || ||||||| || | Sbjct 999462 AACAGAGGTTGATCTTCGCAGGCAAGCAACTCGAAGATGGCAGAACTTTAGCAGATTACA 999521 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||| ||||| ||| | || | || | |||||||| Sbjct 999522 ACATCCAAAAGGAATCAACTCTGCATTTGGTGCTTCGATTGCGCGGTGG 999570 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || |||||||| || ||| | || || ||| | Sbjct 999116 ATGCAGATTTTTGTGAAGACCTTGACAGGCAAGACGATCACTTTGGAAGTGGAGAGCTCT 999175 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| |||| || || || || ||||||||||| || || || ||||| Sbjct 999176 GATACCATTGACAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAA 999235 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||||||||||||||| || |||| | | || || ||||| || || Sbjct 999236 CAGAGGCTGATCTTTGCTGGTAAGCAACTAGAAGATGGTAGGACTCTGGCAGATTACAAC 999295 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || |||||||| || || || Sbjct 999296 ATACAGAAGGAATCGACACTGCA 999318 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | || ||||| || || || | ||||| ||| | Sbjct 998888 ATGCAGATTTTTGTTAAAACCTTGACTGGCAAAACAATCACCTTGGAGGTCGAGAGCTCT 998947 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| |||| || || || || || |||||||| ||||| || ||||| Sbjct 998948 GATACAATCGATAATGTGAAAGCCAAGATCCAAGATAAGGAGGGCATTCCACCTGACCAA 999007 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||||||||||||||| || | | | || || ||||| ||||| Sbjct 999008 CAGAGGTTGATCTTTGCTGGTAAGCAACTCGAAGACGGTAGGACTCTGGCAGATTATAAC 999067 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || || || || | || | || ||||| Sbjct 999068 ATCCAGAAGGAATCGACACTGCACCTGGTGCTCCGATTGCGTGGTGG 999114 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || || ||||| || || | ||||| || || | Sbjct 999572 ATGCAGATCTTTGTGAAGACACTGACAGGGAAGACGATCACGTTGGAGGTCGAA--AGCT 999629 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || ||||||| || ||||| ||||||||||| ||||||||||| | Sbjct 999630 CGGACACAATCGACAACGTGAAGGCAAAGATTCAAGACAAGGAGGGGATTCCTCCAGATC 999689 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | | || |||||||| || ||||| ||||||| || || | || || || | Sbjct 999690 AACAGAGATTGATCTTTGCTGGGAAACAACTGGAGGATGGGCGAACTTTGGCGGATTACA 999749 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || || || || || || || ||| | || || |||||||| Sbjct 999750 ACATTCAGAAAGAGTCGACCCTCCACCTCGTCCTCCGCCTGCGCGGTGG 999798 >seq124 Length=632428 Score = 168 bits (186), Expect = 8e-37 Identities = 177/231 (77%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || ||||| ||||| || || |||||||| || | |||||||| || Sbjct 447466 AATGCAAATTTTCGTCAAAACGCTCACGGGAAAGACTATCACATTGGAGGTTGAA--AGC 447409 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | |||| ||| | || ||||| ||||| |||||||| || || ||||||||| Sbjct 447408 TCCGACACAATTGACAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATCCCTCCAGAC 447349 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| | |||||||| || || ||||| || || |||| || || || || || || Sbjct 447348 CAGCAAAGGCTAATTTTCGCAGGCAAGCAGCTTGAAGATGGACGGACTCTTGCCGATTAC 447289 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || | |||||||| || |||||||||||||| | ||||||||||||||| Sbjct 447288 AACATTCAAAAGGAGTCAACTCTTCATCTAGTGCTCCGTCTTCGCGGTGGA 447238 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || || |||||||| || ||||| ||||||||||| | Sbjct 447921 ATGCAGATATTTGTGAAAACTCTCACCGGCAAAACAATTACCCTTGAGGTTGAAAGTTCT 447862 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||| ||||||||||||||||| |||||||| || |||||| Sbjct 447861 GATACTATTGACAATGTAAAGGCCAAAATTCAGGACAAGGAAGGAATTCCACCGGACCAG 447802 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | ||||| || ||||| ||||| ||||| || | || ||||| || || || || Sbjct 447801 CAGAGGCTAATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGAACCCTGGCCGATTACAAC 447742 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||||| || || | || | ||| | |||||||| Sbjct 447741 ATACAAAAAGAGTCCACGCTCCACTTGGTGCTCCGTTTACGCGGTGG 447695 Score = 143 bits (158), Expect = 3e-29 Identities = 174/233 (75%), Gaps = 7/233 (3%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| | || || || || || ||||| ||||||||| || Sbjct 447238 AATGCAGATTTTTGTGAAGACCTTAACGGGAAAAACAATCACTCTGGAGGTTGAG--AGT 447181 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| ||| | || |||||||||||||||| || || ||||| || || |||||| Sbjct 447180 TCGGATACCATCGACAACGTGAAGGCTAAAATTCAAGATAAAGAGGGCATCCCACCAGAC 447121 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || ||||| ||||| |||||||| || || | | || | || |||||| Sbjct 447120 CAGCAGAGGCTGATTTTCGCTGGAAAGCAACTGGAAGACGGCAGGACTTTGGCCGACTAT 447061 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT-CT--TGCGTCTTCGCGGTGG 27632 ||| | ||||| || || ||| ||| | || || |||||||||| ||||| Sbjct 447060 AATATTCAAAAAGAGTCGACTTCGCATTTGGTACTGCTGCGTCTTCGTGGTGG 447008 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || || || || || || || || | ||||| || | Sbjct 447693 ATGCAAATCTTCGTGAAAACCCTCACTGGAAAAACCATCACCTTGGAGGTGGAAAGCTCT 447634 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||||| || || || || || ||||| ||||| || |||||| Sbjct 447633 GATACCATCGACAATGTGAAGGCCAAGATCCAAGATAAAGAGGGTATTCCACCGGACCAG 447574 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||| || ||||| |||||||| |||| || || || || ||||| ||| Sbjct 447573 CAGAGGCTGATTTTCGCGGGTAAACAACTCGAAGATGGCCGCACTCTGGCTGACTACAAT 447514 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || |||||||| || | ||| | || | |||||||| || ||| Sbjct 447513 ATTCAGAAGGAATCAACATTGCATTTGGTGCTTCGTCTTCGTGGGGGA 447466 Score = 107 bits (118), Expect = 2e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || || || || || || || || | |||| || | || | Sbjct 354260 ATGCAAATCTTCGTGAAAACCCTCACTGGAAAAACCATCACCTTGGAGGGTG-GAAAGCT 354318 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| |||| || || || || || || ||||| || || ||||||| Sbjct 354319 CTGATACCATCGACAATGTGAARGCCAAGAT-CAAGAAAAAGAGGGCATCCCACCAGACC 354377 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | ||||| ||||| |||||||| || | | | || | || ||||||| Sbjct 354378 AGCAGAGGTTGATTTTCGCTGGAAAGCAACTGGAACACGGCAGGACTTTGGCCGACTATA 354437 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||||| || || ||| | ||| | || |||||||||| ||||| Sbjct 354438 ACATTCAAAAAGAGTCGACTTTGCATTTGGTACTGCGTCTTCGTGGTGG 354486 >seq21 Length=2013095 Score = 168 bits (186), Expect = 8e-37 Identities = 176/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || | || || ||||| || ||||| ||||| ||| || | Sbjct 1809684 ATGCAAATCTTTGTGAAAACCTTGACTGGGAAGACCATCACTCTGGAGGTGGAG--AGCT 1809741 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| |||| || |||||||||||||||||||| |||||||| || | Sbjct 1809742 CCGACACCATTGACAATGTGAAAGCCAAAATTCAGGACAAGGAGGGTATTCCTCCGGATC 1809801 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || ||||| || || ||||| || ||||||| | || || || || || | Sbjct 1809802 AGCAAAGGCTGATTTTCGCAGGGAAGCAGCTGGAGGATGGAAGGACTCTCGCTGATTACA 1809861 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || ||||| ||||||||||| || ||| ||||||| || ||||| Sbjct 1809862 ATATTCAGAAGGAGTCCACTCTTCACCTTGTCCTGCGTCTCCGTGGTGG 1809910 Score = 132 bits (146), Expect = 5e-26 Identities = 150/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||| | ||||| || || ||||| || ||||||||| || | Sbjct 1809456 ATGCAGATTTTCGTCAAGACGTTGACCGGGAAAACCATTACCCTGGAGGTTGAG--AGTT 1809513 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | |||||||| || || ||||| |||||||| || ||||||| Sbjct 1809514 CGGACACCATAGACAATGTAAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCAGACC 1809573 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || || || ||||| || ||||| | | | || || || ||||||| Sbjct 1809574 AGCAGAGGCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGTAGGACTCTGGCCGACTATA 1809633 Query 27584 ATGTCCAAAAGGAATCCAC 27602 | |||| ||||| || || Sbjct 1809634 ACATCCAGAAGGAGTCTAC 1809652 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561 |||||||| || || || ||||| || | ||||| ||||| || |||||||| ||||| Sbjct 1809324 AAGGAGGGCATCCCCCCGGACCAACAAAGACTAATCTTTGCCGGGAAGCAACTGGAGGAC 1809383 Query 27562 GATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 | ||| ||||| || || ||||| | || ||||| || || || || || ||||||||| Sbjct 1809384 GGTCGCACCCTTGCTGATTATAACATTCAGAAGGAGTCGACCCTGCACCTTGTCTTGCGT 1809443 Query 27622 CTTCGCGGTGG 27632 ||||| ||||| Sbjct 1809444 CTTCGTGGTGG 1809454 >seq6 Length=5093711 Score = 113 bits (124), Expect = 5e-20 Identities = 366/564 (65%), Gaps = 12/564 (2%) Strand=Plus/Plus Query 64297 TTCCCAATTAGGTACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGG 64356 ||||||||| ||| ||| | | ||||| | |||||||||||||| || |||||| Sbjct 4851662 TTCCCAATTGAGTATCCTCAGATATGGGAAATGTACAAGAAAGCCATGGCCTCGTTCTGG 4851721 Query 64357 ACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG 64416 || | |||||||| || ||| | |||| ||| || | |||||| ||| | | | Sbjct 4851722 ACCGCTGAGGAGGTCGACCTCTCACAGGACCTCCGCCATTGGGAAGGCCTCACGGCCGAC 4851781 Query 64417 GAACAGCACTTCATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTT 64476 ||| |||| |||||| || || || |||||||| | || || || || | Sbjct 4851782 GAAAAGCATTTCATCTCCCACGTTCTGGCCTTCTTCGCCGCCTCCGATGGTATCGTTCTG 4851841 Query 64477 GAGAATTTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTAT 64536 |||||| | | | || | ||||| |||||| | | ||||| | | |||||| Sbjct 4851842 GAGAATCTCGCCGGCCGGTTCATGAAGGAGGTTCAGGTTGCGGAGGCTAGAGCGTTCTAT 4851901 Query 64537 GCGTATCAG---GGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGAC 64593 | | || | | || | ||| ||||| ||||| ||| | || | || Sbjct 4851902 GGCTTCCAAATCGCAATTGA-GAAC--ATTCACTCCGAGATGTACAGTTTGTTGCTCGAA 4851958 Query 64594 AAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCC 64653 | | | ||| | ||||||||| | | ||||| || || ||||||||||| Sbjct 4851959 ACCTACATCAAGGACTCAGTCGAGAAGAACAGGTTGTTCCACGCCATCGAGACTGTACCT 4852018 Query 64654 GCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTC---GTCGTTT 64710 || | || || || || ||||| | ||||| | || || ||||||| Sbjct 4852019 TGCGTCGCGAAGAAAGCCGAGTGGGCGCTAAAATGGATCGAC---GGCTCCGAGTCGTTT 4852075 Query 64711 GGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGT 64770 | ||||||| | || || ||||||||||| |||||||| || || ||||| Sbjct 4852076 GCAGAGCGTCTGATTGGCTTCGCATGTGTGGAAGGTATTTTCTTCTCGGGAAGTTTCTGC 4852135 Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830 | || |||||||| || || || ||||| |||||||| || | || || ||||| || Sbjct 4852136 GCCATATTCTGGCTGAAGAAACGAGGCCTTATGCCAGGATTGACATTCTCAAACGAATTG 4852195 Query 64831 ATCTCTCGGGACGAGGGGCTCCAC 64854 ||||| || ||||| || || ||| Sbjct 4852196 ATCTCCCGAGACGAAGGCCTGCAC 4852219 >seq60 Length=1131370 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556 ||||||| || || || || || |||||||| | |||||||||||||||||||| | | Sbjct 437254 AGGACAAAGAAGGTATCCCACCTGACCAGCAAAGGTTAATTTTTGCTGGTAAGCAATTGG 437195 Query 27557 AGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCT 27616 | |||| ||| || || ||||| ||||| |||||||||| || || ||||| || |||| Sbjct 437194 ATGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACCTGGTCT 437135 Query 27617 TG 27618 || Sbjct 437134 TG 437133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570302900418240