Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Momordica_20charantia_20[genbank_20GCA_5F001995035.1_202016-12-26]
1,052 sequences; 285,613,949 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq609 488 7e-133
seq424 389 5e-103
seq76 163 3e-35
seq96 152 6e-32
seq55 140 4e-28
seq8 125 9e-24
seq850 122 1e-22
seq299 98.7 1e-15
seq266 91.5 2e-13
seq214 89.7 6e-13
seq67 89.7 6e-13
seq23 87.8 2e-12
>seq609
Length=9483
Score = 488 bits (540), Expect = 7e-133
Identities = 609/836 (73%), Gaps = 8/836 (1%)
Strand=Plus/Plus
Query 176269 GGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCA 176328
||||||||||| || |||||||| || || || || || | |||| | || ||
Sbjct 4327 GGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCT 4386
Query 176329 ATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAAT 176388
|| || | ||||| ||| | || |||||||| || | ||||| |||||| | ||||||
Sbjct 4387 ATTGGGTTGCACTTTTACMCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAAT 4446
Query 176389 GGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGA 176448
|| || || || | || |||| | |||||| | | ||| | || |||||||||
Sbjct 4447 GGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGT 4506
Query 176449 CGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCT 176508
|| | ||||||||||||| | | || || |||| ||||||||| ||||||||| ||
Sbjct 4507 CGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCKTCCTTGGATTGCTGTTGCATATTCA 4566
Query 176509 GCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTC 176568
|| || || | || || | || |||||| | |||| ||| | ||||||||| ||
Sbjct 4567 GCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTT 4626
Query 176569 TCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCA 176628
||||| ||||||||||| || || || ||||| |||||||| ||| |||||||||| ||
Sbjct 4627 TCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCT 4686
Query 176629 GAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGA 176688
||||||||||| || ||||||||||| || ||| | || |||| ||||| || || ||
Sbjct 4687 GAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGTTGGTGTATTCGGCGGC 4746
Query 176689 TCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACC 176748
|| || ||| || ||||| || | || |||||| | | || || || ||
Sbjct 4747 TCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACA 4806
Query 176749 GAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATT 176808
||||| ||||| || | ||||||| |||||| ||||| ||||| || || || ||
Sbjct 4807 GAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAGGAAGAAACTTATAATATC 4866
Query 176809 GTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCA 176868
|||||||| || ||||| ||||| || | |||||||| |||||| |||||| || ||
Sbjct 4867 GTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCT 4926
Query 176869 AGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATG 176928
| | | || |||||||| || || | || || || | |||||||| || || |
Sbjct 4927 CGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTA 4986
Query 176929 GGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTG----TCTT 176984
||| || |||| ||||| |||||| | || |||||||| |||||||| |||| | |
Sbjct 4987 GGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTSAT 5046
Query 176985 AGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGG 177044
|| ||| ||| || ||| ||| |||| ||||| |||||||||| || |||||
Sbjct 5047 AGTCAA----GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGG 5102
Query 177045 TATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100
||||||||||||||| || |||||||||||||||||||| || ||| | |||||||
Sbjct 5103 TATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGCTGCTG 5158
>seq424
Length=105662
Score = 389 bits (430), Expect = 5e-103
Identities = 576/822 (70%), Gaps = 2/822 (0%)
Strand=Plus/Plus
Query 176122 TGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCA 176181
||| | |||| || || ||| | ||||| |||| ||||||||||| | ||||| ||
Sbjct 94883 TGGATAACCAGCACTAAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTRATGATCCCT 94942
Query 176182 TGTCTGCTCACTGCTGCAGCATGT-TTTATCGTTGCATTTATTGCAGCACCACCTGTCGA 176240
| | || || | | ||| ||||| || | || ||||| || || || | ||
Sbjct 94943 ACCTTATTGACYGCAACTTC-TGTATTTATTATTRCCTTCATTGCTGCTCCTCCAATAGA 95001
Query 176241 TATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAACATCATCTC 176300
||| || |||||| | ||||| || | ||||||||| | || |||||||| || || ||
Sbjct 95002 TATTGATGGTATTAGTGAACCTGTTTCTGGATCTCTAYTTTACGGAAACAATATTATTTC 95061
Query 176301 AGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATCTGGGAAGC 176360
|| || | |||| | || || || || | ||||| ||| | || ||||||||
Sbjct 95062 TGGTGCCATTATCCCTACTTCTGCAGCTATYGGGTTGCACTTTTACYCGATATGGGAAGC 95121
Query 176361 AGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGTATTCCACTT 176420
|| | ||||| |||||| | |||||||| || || || | || |||| | |||||
Sbjct 95122 TGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 95181
Query 176421 CCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCAT 176480
| | | ||| | || ||||||||| | | ||||||||||||| | | || || ||
Sbjct 95182 CTTACTTGGTGTAGCATGTTACATGGGTAGAGAGTGGGAACTTAGTTTCCGTCTGGGTAT 95241
Query 176481 GCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCT 176540
| |||||||||| ||||||||| || || || || | || || | | |||||| |
Sbjct 95242 GYGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTRCTGTTTTCTT 95301
Query 176541 CGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTAC 176600
| || ||| | ||| ||||| || | ||| ||||||||||| || || || |||||
Sbjct 95302 RATMTACCCAATTGGTMAAGGAAGCTTTTMTGACGGTATGCCTCTAGGAATCTCTGGTAC 95361
Query 176601 ATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATAT 176660
|||||||| ||| |||||||||| | ||||||||||| || ||||||||||| || ||
Sbjct 95362 TTTCAACTTCATGATTGTATTCCAGACTGAGCACAACATCCTTATGCACCCATTTCACAT 95421
Query 176661 GCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGT 176720
| | | ||||| ||||| || || | || || ||| || ||||| || | ||
Sbjct 95422 GTTAGSTGTAGCTGGTGTATTCGGCRGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 95481
Query 176721 TACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATT 176780
|||||| | | || || || || ||||| ||||| || | ||||||| |||
Sbjct 95482 AACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACATATT 95541
Query 176781 CGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTAT 176840
||| ||||| ||||| || || || || |||||||| || ||||| ||||| || ||||
Sbjct 95542 CGGGCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTTAT 95601
Query 176841 CTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCC 176900
|||||| |||||| |||||| || || | | | || ||||||||||| || | ||
Sbjct 95602 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTTGCTGCTTGGCC 95661
Query 176901 AGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAAT 176942
|| || | |||||||| || || | ||| || |||| ||
Sbjct 95662 TGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTAT 95703
Score = 349 bits (386), Expect = 4e-91
Identities = 508/722 (70%), Gaps = 2/722 (0%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
|||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 27411 TTTAYATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACYGCAACTTC-TGTA 27353
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| |||| || ||||| || || || || | ||| || |||||| | ||||| ||
Sbjct 27352 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGRTATTGATGGTATTMGTGAACCTGTT 27293
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
||||||||| | || |||||||| || || || || || | |||| | ||
Sbjct 27292 TMTGGATCTCTAYTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCA 27233
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || | ||||| ||||| || |||||||| || ||||| |||||| | |||
Sbjct 27232 GCTATYGGGTTGCACTTTTACCCGATATGGGAAGCTGCTTYCGTTGATGAATGGTTATAC 27173
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
||||| || || || | || |||| | ||| || | | ||| | || |||||||
Sbjct 27172 AATGGTGGTCCTTATGAGCTAATTGTTCTACACWTCTTACTTGGTGTAGCATGTTACATG 27113
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | ||||||||||||| | | || || ||| |||||||||| |||||||||
Sbjct 27112 GGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGTCCTTGGATTGCTGTTGCATAT 27053
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | || || | || |||||| | |||| ||| | ||| |||||
Sbjct 27052 TCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTAAAGGAAGC 26993
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|| ||||| ||||||||||| || || || ||||| |||||||| ||| |||| |||||
Sbjct 26992 TTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTGTTCCAG 26933
Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685
|| ||||||||||| || ||||||||||| || ||| | || ||||| ||||| || ||
Sbjct 26932 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 26873
Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745
| || || ||| || ||||| || | || |||||| | | | || ||
Sbjct 26872 RGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAAGGAAACC 26813
Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805
| ||||| ||||| || | | ||||| |||||| ||||| ||||| || || ||
Sbjct 26812 ATAGAAAATGAATCTGCTAATGAAGTTTACAGATTCGGGCAAGAGGAAGAAACTTATAAT 26753
Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865
|| |||||||| | ||||| ||||| || | |||||||| |||||| |||||| ||
Sbjct 26752 ATCGTAGCTGCTTATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 26693
Query 176866 TC 176867
||
Sbjct 26692 TC 26691
>seq76
Length=1023076
Score = 163 bits (180), Expect = 3e-35
Identities = 170/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 176878 CACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGC 176937
|| |||||||| || || | || || || | |||||||| || || | ||| || ||
Sbjct 1004330 CATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGC 1004389
Query 176938 ACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGT 176997
|| ||||| |||||| | || |||||||| |||||||| ||||| | || | |||
Sbjct 1004390 ACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 1004449
Query 176998 AAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATG 177057
|| ||| ||| |||| ||||| |||||||||| || ||||||||||||||||||
Sbjct 1004450 CGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATG 1004509
Query 177058 CACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100
|| || |||||||||||||||||||| || ||| | |||||||
Sbjct 1004510 CATGAACGTAATGCTCACAACTTCCCTCTAGACTTAGCTGCTG 1004552
>seq96
Length=850568
Score = 152 bits (168), Expect = 6e-32
Identities = 200/276 (72%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 176338 CACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCA 176397
||||| ||||| || |||||||| || | ||||| |||||| | |||||||| || ||
Sbjct 64832 CACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCT 64773
Query 176398 TACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGG 176457
|| | || |||| | |||||| | | ||| | || ||||||||| || | |||
Sbjct 64772 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGG 64713
Query 176458 GAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTA 176517
|||||||||| | | || || |||||||||||||| ||||||||| || || || ||
Sbjct 64712 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 64653
Query 176518 TCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGT 176577
| || || | || |||||| | |||| ||| | ||||||||| || ||||| |||
Sbjct 64652 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGT 64593
Query 176578 ATGCCTCTTGGCAT---TTCAGGTACATTCAACTTT 176610
||||| |||||| | |||| | || |||| ||
Sbjct 64592 ATGCC---TGGCATCCGTACAGGAATATCCAACCTT 64560
>seq55
Length=1179671
Score = 140 bits (154), Expect = 4e-28
Identities = 226/324 (70%), Gaps = 11/324 (3%)
Strand=Plus/Plus
Query 176778 ATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCT 176837
||||| || || ||||| || || || || ||| | || ||||| ||||| | |
Sbjct 344073 ATTCGAGCACGAGGAAGAAACTTATAATATCGTA----CTCATGGTTATTTTGGCCAATT 344128
Query 176838 TATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATT 176897
||||||||| |||||| |||||| || || | | || |||||| | || || |
Sbjct 344129 TATCTTCCAATATGCTAGTTTCAACAATTCTCTTTCTTTACATTTCTTCTTAGCTGCTTG 344188
Query 176898 CCCAGTTGTTTGCATCTGGTTTAC-TGCAATGGGTGTTTGCACAATGGCATTCAACCTTA 176956
|| | || | |||||||| || | || | | || ||| | |||||| | |
Sbjct 344189 GCCTGCAGTAGGTATCTGGTTCACGTTCACCGCGCATT------ATGACTTTCAACTTAA 344242
Query 176957 ACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGG 177016
| |||||||| |||||||| ||||| | || | ||| || ||| ||| ||||
Sbjct 344243 ATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTAATACTTGGG 344302
Query 177017 GAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACA 177076
||||| |||||||||| || ||||||||| |||||||||| || |||| ||||||||
Sbjct 344303 CTGATATTATTAACCGTGCTAATCTTGGTATGAAAGTTATGCATGAACGTAGTGCTCACA 344362
Query 177077 ACTTCCCACTTGACCTTGCTGCTG 177100
||||||| || ||||| | || ||
Sbjct 344363 ACTTCCCTCTAGACCTAGTTGTTG 344386
>seq8
Length=4047118
Score = 125 bits (138), Expect = 9e-24
Identities = 182/257 (71%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| ||| || ||||| || || || || ||||| || ||||||| ||||| ||
Sbjct 2331990 TTTATTATTGTCTTCATTGCTGCTCCTCCAGTAGATATTGATAGTATTCGTGAACCTGTT 2332049
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| ||||||||||| || |||||||| || || || || || | |||| | ||
Sbjct 2332050 TCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCA 2332109
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || | ||||| ||||| || |||||||| || | ||||| |||||| | |||
Sbjct 2332110 GCTATTGGGTTGCACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATAC 2332169
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
||||| || || || | || |||| | |||||| | | ||| | || |||||||
Sbjct 2332170 AATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATG 2332229
Query 176446 GGACGCCAATGGGAACT 176462
|| || | ||||||||
Sbjct 2332230 GGTCGAGAGTGGGAACT 2332246
>seq850
Length=2209
Score = 122 bits (134), Expect = 1e-22
Identities = 194/276 (70%), Gaps = 2/276 (1%)
Strand=Plus/Plus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
|||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 62 TTTATATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTA 120
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| |||| || ||||| || || || || ||||| || |||||||| ||||| ||
Sbjct 121 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 180
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| ||||||||||| || |||||||| || || || || || | |||| | ||
Sbjct 181 TCTGGATCTCTACTTTACGGAAACAATATTATWTCTGGTGCCATTATCCCTACTTCTGCA 240
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || | ||||| ||||| || |||||||| || | ||||| |||||| | |||
Sbjct 241 GCTATTGGGTTGCACTTTTACCCGATATGGGAAGCTGCTTCCGTTGATGAATGGTTATAC 300
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTC 176421
||||| || || || | || |||| | ||||||
Sbjct 301 AATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 336
>seq299
Length=193022
Score = 98.7 bits (108), Expect = 1e-15
Identities = 198/290 (68%), Gaps = 14/290 (5%)
Strand=Plus/Minus
Query 176544 CTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATT 176603
||| ||| | ||||||||| || | | | ||||||||||| || | || | | ||
Sbjct 156183 CTACCCAATTGGTCAAGGAAGCTTTTTTCACGGTATGCCTCTAGGAACCTCTCATGCTTT 156124
Query 176604 CAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCT 176663
|||||| ||| |||||||| | | ||||||||||| | ||||||||||| || || |
Sbjct 156123 CAACTTCATGATTGTATTCTAGACTGAGCACAACATCATTATGCACCCATTTCACATATT 156064
Query 176664 TGGAGTAGCAGGTGTGTTTGGTG-GATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTA 176722
| ||||| |||| || || | ||| | || ||||| || | | || |
Sbjct 156063 AGATGTAGCCAGTGTATTCGGCGACATCAATGTT-------ATGCATGGTTCTTTGGTAA 156011
Query 176723 CTTCTTCACTTGTTAGAGAGACAACC---GAAAACGAATCACAAAACTACGGTTACAAAT 176779
||| || |||||| || || |||| ||||| | || | || | ||||||| |
Sbjct 156010 CTT-TTAGTTTGTTAAAGGGAAAACCATAGAAAATGGAT--CTTAATGAAGGTTACAGTT 155954
Query 176780 TCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTT 176829
||| ||||| ||||| || || || || ||||| || || ||||| |||
Sbjct 155953 TCGAGCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 155904
>seq266
Length=237009
Score = 91.5 bits (100), Expect = 2e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 177011 CATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATG 177070
|||| | ||||| |||||||||| | |||||||||||||||||||| || | |||||
Sbjct 76096 CATGTGCTGATATTATTAACCGTGCTGATCTTGGTATGGAAGTTATGCATGAACATAATG 76037
Query 177071 CTCACAACTTCCCACTTGACCTTGCTGC 177098
||||||||||||||| |||| |||||
Sbjct 76036 CTCACAACTTCCCACCAAACCTAGCTGC 76009
>seq214
Length=334764
Score = 89.7 bits (98), Expect = 6e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 176929 GGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGAC 176988
||| || |||| ||||| |||||| | || |||||||| |||||||| ||||| | ||
Sbjct 71669 GGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGAT 71610
Query 176989 AACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATG 177048
| ||| || ||| ||| |||| ||||| |||||||||| || |||||||||
Sbjct 71609 AGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATG 71550
Query 177049 GAAGTTA 177055
|||||||
Sbjct 71549 GAAGTTA 71543
>seq67
Length=1100631
Score = 89.7 bits (98), Expect = 6e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || ||||||||||| ||| | || | || ||| | | ||| |||||
Sbjct 664412 ACCTGTAACTATTCAATATCCTTACGAAAAATTAATCACATCGGAGCGTTTCCGCGGTCG 664471
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
|| || | ||| ||||| || || || || ||||| || ||||| | ||||| |||||
Sbjct 664472 AATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTAT 664531
Query 19415 CAATCTACCAGTGGTGGATTGG 19436
|||| || || || ||||||
Sbjct 664532 AGATCTCCCCGTTGTTGATTGG 664553
>seq23
Length=1845300
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 176947 TTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATT 177006
|||||| | || ||||| || |||||||| ||||| | || | | ||| || |||
Sbjct 1114935 TTCAACTTAAATGGTTTTAATTTCAACCAATCTGTAGTTGATAGTTAAGGTCGTGTAATT 1114876
Query 177007 CCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGT 177066
|| || || |||| |||| ||| || |||||||||||||||||||| || ||
Sbjct 1114875 TATATATAGGCTAATATTATTAAGTGTGTTAATCTTGGTATGGAAGTTATGCATGAAAGT 1114816
Query 177067 AATGCTCACAACTTCCCACTTGACCT 177092
|||||||||| |||||| || ||||
Sbjct 1114815 AATGCTCACAGCTTCCCTCTACACCT 1114790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603486464048640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |