Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq11707 127 4e-24 seq4588 107 4e-18 seq771 105 1e-17 seq11292 104 5e-17 seq9848 104 5e-17 seq8026 104 5e-17 seq8878 100 6e-16 seq11263 98.7 2e-15 seq7806 98.7 2e-15 seq4230 95.1 3e-14 >seq11707 Length=330502 Score = 127 bits (140), Expect = 4e-24 Identities = 307/461 (67%), Gaps = 3/461 (1%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 || ||||||||||| || |||||| | || || || || || | || ||||| || Sbjct 116379 TCCTTTGCCGAGCGCATCATCGCCTTCGCTTGCGTCGAGGGGATCTTCTTCTCCGGAAGC 116438 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 ||||| ||||| || ||||| ||| || | ||||| || ||| | || ||| Sbjct 116439 TTCTGTGCCATTTTCTGGCTCAAGAAGCGGGGGTTAATGCCGGGACTCACCTTCTCCAAC 116498 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAG 230349 ||| | ||| || |||||||| || || | |||| | ||| | || || Sbjct 116499 GAGCTGATCTCGCGAGACGAGGGCCTGCACTGCGATTTCGCCTGCCTTCTCTACTCCCTC 116558 Query 230350 CTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAAC 230409 || ||| ||||| ||| ||||| ||| | | || || || | | Sbjct 116559 CTGAGGAAGAAGCTGAGCGAGGAGCGAGTCAAGGCTATCGTCCGCAACGCGGTGGAGATC 116618 Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACT 230468 || | |||||| | || ||||| | || ||| || || | || ||||||| | | Sbjct 116619 GAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGT-GCGTTGGTCGGGATGAACGGCGCGTT 116677 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | ||||||||||| ||||| |||||||| | || | ||| ||||| | || ||| Sbjct 116678 GATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTCTTGGGTGCGCTTGGGTGCGGGAA 116737 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 |||||| | | ||||| |||| | |||||||| || ||| | || |||||||| Sbjct 116738 GGTGTACGGTGTTCAAAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAGAC 116797 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG-AGGCCT 230628 |||||||||||| ||| | || |||| || ||| |||||| Sbjct 116798 CAACTTCTTCGAGAAGAGGGTGGGTGAGTACCAGAAGGCCT 116838 >seq4588 Length=278095 Score = 107 bits (118), Expect = 4e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||||||||||||||||||||||||| || || |||| || |||||||||||||||| Sbjct 139498 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 139439 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 139438 GCCCCACGGTGGGC 139425 >seq771 Length=227240 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||||| || || |||| || ||||||||||||||||| Sbjct 72802 TGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 72743 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 72742 CCCCACGGTGGGC 72730 >seq11292 Length=738477 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 222661 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 222602 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 222601 CCCACGGTGGGC 222590 >seq9848 Length=867669 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 709223 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 709282 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 709283 CCCACGGTGGGC 709294 >seq8026 Length=978627 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 315004 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 315063 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 315064 CCCACGGTGGGC 315075 >seq8878 Length=750635 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 652006 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 652065 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 652066 CCCCACGGTGGGC 652078 >seq11263 Length=329385 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 169315 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 169256 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 169255 CCCACGGTGGGC 169244 >seq7806 Length=438884 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 194038 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 194097 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 194098 CCCACGGTGGGC 194109 >seq4230 Length=1343068 Score = 95.1 bits (104), Expect = 3e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||| ||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 973148 GCCCGTCTAGCACAGTCGGTAGAGCGCAAG-CTCTTAACCTTGTGGTCGTGGGTTCGAGC 973090 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 973089 CCCACGGTGGGC 973078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057399765965630