Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq8682 95.1 2e-14 >seq8682 Length=358022 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| || || || ||||| || || | ||| |||| ||| Sbjct 101309 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAAACCATTACCCTTGAGGTTGAGAGCTC- 101251 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| |||| || ||||||||||| || || || || || || || Sbjct 101250 TGACACCATTGATAACGTAAAGGCCAAGATTCAAGATAAGGAGGGCATCCCCCCAGACCA 101191 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || || || || ||||| | || || ||||||| | | ||||| || Sbjct 101190 GCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAAGACGGTCGAACCCTTGCCGATTACAA 101131 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | |||||||| | ||| | || ||||| || Sbjct 101130 CATTCAGAAGGAATCTACCCTTCATTTGGTGCTCCGTCTCCGTGGTGGAAT 101080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755160418396800