Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq9707 129 5e-25 seq10231 118 8e-22 seq8682 116 3e-21 seq6563 89.7 4e-13 >seq9707 Length=1014798 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || |||||||||||||| || ||||||||| || ||| |||| || Sbjct 740396 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCGAGGGTGCGCCCGTCCTCG 740337 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| ||||| ||||| ||||| | |||||||||||| Sbjct 740336 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGG 740277 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | ||||| | ||| ||||| | ||| ||||||||| Sbjct 740276 ATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATCGTCTTG 740217 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||||||||| ||||| Sbjct 740216 CCGGTGAGGGTTTTCACAAAGATCTGCAT 740188 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || |||||||||||||| || ||||| ||| || ||| |||| ||| Sbjct 739940 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCCTCC 739881 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| || || || |||||||| | || |||||||| Sbjct 739880 AGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGG 739821 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| || ||||||||| | || ||||||||| Sbjct 739820 ATCTTGGCCTTCACGTTGTCGATGGTGTCGGAACTCTCCACCTCAAGCGTGATCGTCTTG 739761 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 739760 CCGGTGAGGGTCTTGACGAAGATCTGCAT 739732 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| ||||||||| |||||||||||| || || |||| || Sbjct 725467 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCGTCTTCG 725408 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || |||||||||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 725407 AGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGG 725348 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | || || |||||| Sbjct 725347 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTG 725288 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || || || || ||||| ||||| ||||| || Sbjct 725287 CCGGTTAGGGTTTTCACGAAGATCTGCATATT 725256 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| ||||||||| ||||| |||||| || || |||| || Sbjct 739484 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTTCGGCCGTCTTCG 739425 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || |||||||||||||| |||| ||||| ||||| || || | || ||||||||| Sbjct 739424 AGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGG 739365 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | || || |||||| Sbjct 739364 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTG 739305 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || || || || ||||| ||||| ||||| || Sbjct 739304 CCGGTTAGTGTTTTCACGAAGATCTGCATATT 739273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || |||||||||||||| || || || ||| || |||| |||| || | Sbjct 740167 CAAGATGGAGAGTGCTCTCCTTCTGGATATTATAATCGGCGAGGGTGCGACCGTCCTCGA 740108 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| || | || ||| ||||| || || | || ||||||||| | Sbjct 740107 GCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGA 740048 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | |||| | || || || | ||| | ||||||| Sbjct 740047 TCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAACTTCTAGGGTTACGGTCTTGC 739988 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || || ||||||||||| ||||| Sbjct 739987 CTGTTAGGGTTTTCACAAAGATCTGCAT 739960 >seq10231 Length=688147 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||| | || | |||| ||| ||||| ||||||||| ||||| |||||| Sbjct 310305 CCTCCTCTGAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCGGCG 310364 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || |||| || || |||||||||||||| |||| ||||| ||||||||||| Sbjct 310365 AGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 310424 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || ||| || | | | |||| ||||||| Sbjct 310425 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACC 310484 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || | ||| || ||||||||||| || || ||||| ||||| |||||| Sbjct 310485 TCTAGGGTTATAGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCATG 310532 >seq8682 Length=358022 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| ||||||||||| || | |||| || Sbjct 100417 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCCTCG 100476 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || ||||||| ||| ||||| || || | |||||||||||| | Sbjct 100477 AGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 100536 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| |||||| | | ||||| | || ||||||| |||||| |||||| Sbjct 100537 ATTTTGGCCTTAACATTGTCGATTGTGTCCGAGCTTTCTACCTCCAAGGTAATGGTCTTG 100596 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||||||||| |||||||| Sbjct 100597 CCAGTGAGTGTCTTCACAAAAATTTGCAT 100625 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| |||||||||||| ||| || | || Sbjct 100870 AAAACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGTCCATCC 100929 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || ||||| ||||| || ||||||| ||| ||||| || || | |||||||||||| Sbjct 100930 TCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCC 100989 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || || || | | | |||| || || ||||||| ||| || || Sbjct 100990 TGAATCTTGGCTTTCACATTATCAATGGTGTCGGAACTTTCAACCTCCAAGGTGATGGTT 101049 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| |||||||||||||| Sbjct 101050 TTTCCGGTGAGGGTCTTAACAAAGATTTGCAT 101081 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| ||| | |||| || || || || ||||| || Sbjct 100206 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCGTCCTCGAGCTGCTTACCGGCAAA 100265 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| || ||| |||||||| || | |||||||||||| || ||| ||| || Sbjct 100266 GATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATT 100325 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| | ||| ||||||| ||| |||||||| || || || |||||||| Sbjct 100326 GTCAATGGTGTCCGAGCTCTCGACCTCCAAGGTGATCGTCTTCCCGGTAAGGGTCTTCAC 100385 Query 45325 AAAGATTTGCAT 45336 ||| || ||||| Sbjct 100386 AAAAATCTGCAT 100397 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| |||||||||||| ||| || | || Sbjct 100642 AAAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGCCCATCT 100701 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || ||||| ||||| || ||||||| ||| || || || || | ||||||||||| Sbjct 100702 TCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCT 100761 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | | |||| | || ||||||| || || ||| Sbjct 100762 TGAATCTTGGCCTTGACATTGTCAATGGTGTCTGAGCTTTCAACCTCCAATGTGATGGTC 100821 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || || ||||| ||||| || ||||| Sbjct 100822 TTGCCAGTGAGGGTCTTAACAAAAATCTGCAT 100853 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||||||||||||||| ||| || ||| |||| || Sbjct 101101 ACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCGACCGTCTTCA 101160 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| |||| || ||| ||||| || || | |||||||| || | Sbjct 101161 AGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCTTGA 101220 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | |||||| || || Sbjct 101221 ATCTTGGCCTTTACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGGGTAATGGTTTTC 101280 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 101281 CCAGTGAGGGTCTTGACGAAGATCTGCAT 101309 >seq6563 Length=399665 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||||||||||||| || || | | |||||||| || Sbjct 389019 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCGTCCAGCTG 389078 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| ||||| || || | |||||||||||| ||| || Sbjct 389079 CTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 389138 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| | ||| ||||||| || || ||||| || || Sbjct 389139 CGCCTTGACATTATCAATAGTGTCCGAGCTCTCGACCTCCAAAGTGATGGTCTTCCCAGT 389198 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| Sbjct 389199 CAAGGTCTTGACAAAGATCTGCAT 389222 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||| || || ||||||||||| || || |||| || Sbjct 390382 ACCAAGTGGAGGGTAGACTCTTTTTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCA 390441 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| ||||||| ||||| || || || | |||||||||||| Sbjct 390442 AGCTGCTTTCCAGCGAAGATCAACCTTTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGG 390501 Query 45248 ATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 | |||| |||| || | | | | |||| | ||| ||||| | || || ||||| Sbjct 390502 A-TTTTAGCTTTGACGTTGTCAATGGTGTCTGAGCTCTCGACCTCGAGAGTGATGGTCTT 390560 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| ||||||||||| Sbjct 390561 TCCGGTGAGGGTTTTCACGAAGATTTGCAT 390590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394924486342321