Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq11707 170 2e-37 seq9707 118 9e-22 seq10231 104 2e-17 seq6563 104 2e-17 seq8682 95.1 1e-14 seq6147 95.1 1e-14 >seq11707 Length=330502 Score = 170 bits (188), Expect = 2e-37 Identities = 554/853 (65%), Gaps = 13/853 (2%) Strand=Plus/Plus Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605 ||||| || || | || || || || ||| | |||||||| ||||| ||||| || || Sbjct 115968 ATGTTCCCAATCCAGTACCCGGAGATCTGGGAGATGTACAAGAAGGCGGAAGCCTCCTTC 116027 Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAA 57665 ||||||| ||| || || || || || |||| | | | | || |||| || Sbjct 116028 TGGACCGCCGAGGAGGTCGATCTCTCCCAGGACGTCCTCCAATTCGAAGCCCT--AACCC 116085 Query 57666 TCTGAGAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTG 57723 | ||||| | || || | ||||| | || || || ||||| ||||| || || | Sbjct 116086 CCGACGAGAAGCACTTCATCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCG 116145 Query 57724 TTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCT 57783 | |||||| | | | ||| || |||| || || || ||||||| | || Sbjct 116146 TCCTAGAGAATCTCGCAGGAAGGTTCATGAAAGAGGTCCAGGTCGCGGAGGCCCGCGCCT 116205 Query 57784 TTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCG 57843 | || || || || | ||||| || ||| | || || || ||||| || || | | Sbjct 116206 TCTATGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGG 116265 Query 57844 ATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGC 57903 | | ||| | ||||| || ||||| | || ||| |||| ||||| || | | Sbjct 116266 AGTCTTACATCAAGGATTCCGCTGAGAAGACCCGCCTCTTCCACGCAATCGACACCGTCC 116325 Query 57904 CCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGT 57963 | || ||||||||||| ||||| | || ||||| | | || | || | Sbjct 116326 CTTGCATTGCCAAGAAGGCCCAGTGGGCCCTCCGCTGGATCGATGGTTCCGAGTCC---T 116382 Query 57964 TCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTG 58023 | |||||| | | ||||| ||||| |||||| || || ||||| || || ||||| Sbjct 116383 TTGCCGAGCGCATCATCGCCTTCGCTTGCGTCGAGGGGATCTTCTTCTCCGGAAGCTTCT 116442 Query 58024 CGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGT 58083 || || || ||| | ||||| || || | ||||| || || || || ||||||| Sbjct 116443 GTGCCATTTTCTGGCTCAAGAAGCGGGGGTTAATGCCGGGACTCACCTTCTCCAACGAGC 116502 Query 58084 TGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG 58143 |||| ||||| |||||||| || || ||||| || ||||| | ||||| | | | Sbjct 116503 TGATCTCGCGAGACGAGGGCCTGCACTGCGATTTCGCCTGCCTTCTCTACTCCCTCCTGA 116562 Query 58144 TCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA 58202 || || | || ||| ||| || || || || || | | ||||| | |||||| Sbjct 116563 GGAAGAAGCTGA-GCGAGGAGCGAGTCAAGGCTATCGTCCGCAACGCGGTGGAGATCGAG 116621 Query 58203 AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATG 58262 | |||||||| ||| || || ||| || || |||| |||||| | |||||| Sbjct 116622 AGGGAGTTTGTGTGCGACGCGCTGCCGTGTGCGTTGGTCGGGATGAACGGCGCGTTGATG 116681 Query 58263 TCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTC 58320 ||||||| ||||| || |||||| | || ||| | || | | | || || Sbjct 116682 AGCCAGTACATCGAGTTCGTCGCCGACCGGCTCTTGGGTGCGCTTGGGTGCGGGAAGGT- 116740 Query 58321 ATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAA 58380 ||| |||| |||||||||| ||| | ||||||||| | |||| ||||| | Sbjct 116741 -GTACGGTGTTCAAAACCCGTTTGATTGGATGGAGCTGATCTCGTTGCAGGGGAAGACCA 116799 Query 58381 ACTTTTTCGAAAA 58393 |||| ||||| || Sbjct 116800 ACTTCTTCGAGAA 116812 >seq9707 Length=1014798 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || ||||| || ||||| |||| || || Sbjct 739272 AAATATGCAGATCTTCGTGAAAACACTAACCGGCAAGACCATCACTCTCGAGGTCGAGAG 739331 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | ||||| || Sbjct 739332 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGA 739391 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| || |||||| | |||||| || | ||| || Sbjct 739392 CCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTCGCCGACTA 739451 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || || || || ||||| |||||||| ||| | || | ||||||| Sbjct 739452 TAACATCCAGAAGGAGTCCACTCTCCATCTGGTGCTTCGTCTTCGCGGCGGTA 739504 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || ||||| || ||||| |||| || || Sbjct 725255 AAATATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGAG 725314 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || ||||||||| || | ||||| || Sbjct 725315 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGA 725374 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| || |||||| | |||||| || | ||| || Sbjct 725375 CCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGAACCCTCGCCGACTA 725434 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || ||||| |||||||| ||| | || | ||||| Sbjct 725435 CAACATCCAGAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTCCGCGGCGG 725485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| ||||||||| |||| ||||| || Sbjct 740416 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTTGAGAGCTCT 740475 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || || ||||||||| ||| | || || |||||| Sbjct 740476 GATACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 740535 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || |||||||| || | ||| | ||||| || Sbjct 740536 CAGCGTCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGCACTCTTGCTGATTACAAT 740595 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || || || Sbjct 740596 ATTCAGAAGGAGTCTACCCTCCACCTTGTCCT 740627 >seq10231 Length=688147 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 || ||| |||||| || ||||| || || || || ||||| || || ||| | || || | Sbjct 310539 AACCAACCATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACTATAACCCTAGAGGTGG 310480 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | | || |||| |||| | ||||| | || |||||||||||| | || | Sbjct 310479 AGTCCTCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTC 310420 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 ||||||||||||| || || ||||| || |||||| | || ||| || | || Sbjct 310419 CCGACCAGCAGCGCCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCGCCG 310360 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | |||||||| || || || ||||| ||||| ||||| || || || || || || Sbjct 310359 ACTATAACATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCAGGCTCAGAGGAGG 310305 >seq6563 Length=399665 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||||||||| || || || || || || ||| | || |||||| || Sbjct 390362 ATGCAGATCTTCGTAAAGACCCTCACCGGAAAGACCATAACCCTTGAGGTTGAAAGCTCT 390303 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||||||| | || || |||||| Sbjct 390302 GACACAATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAG 390243 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || ||| |||| ||| ||| || ||| || ||| Sbjct 390242 CAGAGGCTGATCTTTGCGGGAAAGCAGCTGGAGGACGGCCGCACTCTGGCCGACTACAAC 390183 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| ||||||||||| || ||||| || Sbjct 390182 ATCCAAAAGGAATCGACTCTCCACCTGGTCCT 390151 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || || ||| | || || ||| ||| Sbjct 390134 ATGCAAATCTTCGTTAAGACACTCACTGGAAAGACTATAACCCTTGAGGTCGAAAGTTCC 390075 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || |||||||||||| | ||||| |||||| Sbjct 390074 GATACGATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 390015 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| || ||| | || ||| | |||| | ||||||||| Sbjct 390014 CAGAGGCTCATTTTCGCTGGAAAGCAGCTTGAGGACGGAAGGACTCTTGCGGATTATAAC 389955 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || |||| || Sbjct 389954 ATCCAGAAGGAGTCAACCCTCCACTTGGTCCT 389923 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || ||||| || || |||||| | || || || || Sbjct 389678 ATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAAGTGGAGAGCTCA 389619 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || ||| | | ||||||| ||| | || || ||||| Sbjct 389618 GACACGATTGATAATGTGAAGGCAAAGATTCAAG-ACAAGGAGGGCATCCCACCAGACCA 389560 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || ||| | || || || ||| | ||||| || Sbjct 389559 GCAGAGGCTGATTTTCGCAGGGAAGCAGCTTGAGGATGGTAGGACCCTTGCTGATTACAA 389500 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||||| || || || ||||| || || ||| Sbjct 389499 CATTCAAAAGGAGTCCACCCTTCACCTTGTCCTT 389466 >seq8682 Length=358022 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || ||||| || ||| | || ||||| || Sbjct 101309 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAAACCATTACCCTTGAGGTTGAGAGCTCT 101250 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || || ||||| ||| | || || |||||| Sbjct 101249 GACACCATTGATAACGTAAAGGCCAAGATTCAAGATAAGGAGGGCATCCCCCCAGACCAG 101190 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||||||| | |||||| | || | |||||| ||| Sbjct 101189 CAGAGGCTGATCTTCGCTGGCAAACAGCTTGAAGACGGTCGAACCCTTGCCGATTACAAC 101130 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || |||||| |||| || Sbjct 101129 ATTCAGAAGGAATCTACCCTTCATTTGGTGCT 101098 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||||| || ||||| || |||||| |||| || ||| || Sbjct 101537 ATGCAGATCTTTGTGAAAACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 101478 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||| || | || || |||||| Sbjct 101477 GACACCATCGATAATGTCAAAGCTAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAG 101418 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| ||| | || ||| || | |||||| ||| Sbjct 101417 CAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCCGATTACAAC 101358 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| || || || || ||| |||| || Sbjct 101357 ATTCAAAAGGAGTCCACCCTCCATTTGGTGCT 101326 >seq6147 Length=2276951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| || || || || || || || || ||| |||| || ||| Sbjct 1402835 CAACCATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTCGAGGTCGAAT 1402894 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||| ||| | ||||| | Sbjct 1402895 CCTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGG 1402954 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || || ||| | || ||| || | ||| | Sbjct 1402955 ACCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGTACCCTCGCCGACT 1403014 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || || || || || || ||||| || | || ||||| || Sbjct 1403015 ACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGAGG 1403066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445591988323920