Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4704 100 4e-16 >seq4704 Length=219207 Score = 100 bits (110), Expect = 4e-16 Identities = 158/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| |||||||| | || | |||||||| ||| |||| | | |||||||| ||| || Sbjct 5925 TCCCCCCTGATCAACATAACGAGCGGTGTCATTGAAAACCCGTAGCATTGGAACAATTCC 5866 Query 66275 ATTGGATGTACCATTGGT-CCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTG 66333 ||| ||||| ||||| || ||| || ||||| || || | ||||||||||| || | Sbjct 5865 ATTAGATGTCCCATTTGTTCCCCGA-ATATAACTCCCTGTGGCACGAATATTGTGAACCG 5807 Query 66334 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 66393 | | ||| ||||| || || ||| ||| | || || || || || ||||| | Sbjct 5806 AGACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAGGTGTCATATA 5747 Query 66394 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 |||| || || |||||||| ||||| | || || |||||| Sbjct 5746 TGCCTTCAATGCTATCATCTTTCATGCACAACAGGAAGCAGCTA 5703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657915281664840