Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morus_20notabilis_20[refseq_20GCF_5F000414095.1_202013-08-07] 31,301 sequences; 320,378,613 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq11707 134 2e-26 >seq11707 Length=330502 Score = 134 bits (148), Expect = 2e-26 Identities = 390/586 (67%), Gaps = 22/586 (4%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || ||| ||| | || || ||||| |||||||| ||||| | |||||||| | Sbjct 115969 TGTTCCCAATCCAGTACCCGGAGATCTGGGAGATGTACAAGAAGGCGGAAGCCTCCTTCT 116028 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTG-TACGATTGGGAGACT---CGTTTG 125111 |||| | ||| ||||||||||| ||| ||||| | | | ||| | || | | | Sbjct 116029 GGACCGCCGAGGAGGTCGATCTCTCCCAGGACGTCCTCCAATTCGAAGCCCTAACCCCCG 116088 Query 125112 ACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGA 125171 || || | ||| | || || | ||| | | ||||||||||||| |||||| || Sbjct 116089 AC-GAGA---AGC---ACTTCATCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGC 116141 Query 125172 ATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGT 125229 |||||| || ||||| | | ||| ||||| | ||| || | |||| Sbjct 116142 ATCGTCCTAGAGAATCTCGCAGGAAGGTTCATGAAAGAGGT--CCAGGTCGCGGAGGCC- 116198 Query 125230 CGTGCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 || || || || || ||||| ||| || |||||| | ||||| || |||||| Sbjct 116199 CGCGCCTTCTATGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTC 116258 Query 125289 CTGATTGACATGTACATTCGCGAT-CCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 || | || ||||| ||| |||| | | || | ||||| |||||||||| Sbjct 116259 CTTCTGGAGTCTTACATCAAGGATTCCGCTGAGAAGACCCGC-CTCTTCCACGCAATCGA 116317 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 ||| || || | || || ||||| || |||| | || |||||||||| | | Sbjct 116318 CACCGTCCCTTGCATTGCCAAGAAGGCCCAGTGGGCCCTCCGCTGGATCGATGGTTCCGA 116377 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 ||| | ||||| | | | || ||||| ||| ||||| |||||||| || || Sbjct 116378 GTCCTTT---GCCGAGCGCATCATCGCCTTCGCTTGCGTCGAGGGGATCTTCTTCTCCGG 116434 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 || || ||||| || |||||||||||||| || | ||||| ||||| || | Sbjct 116435 AAGCTTCTGTGCCATTTTCTGGCTCAAGAAGCGGGGGTTAATGCCGGGACTCACCTTCTC 116494 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 |||||| | || || |||||||||||||| ||||| || || ||| Sbjct 116495 CAACGAGCTGATCTCGCGAGACGAGGGCCTGCACTGCGATTTCGCC 116540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740769251324760